RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 CC2D1AQ6P1N0 951 aaPredicted RBP13.26□□□□□ -0.29
SHMT2-230ENST00000557427 HS2ST1Q7LGA3 356 aa13.26□□□□□ -0.29
SHMT2-230ENST00000557427 TMPRSS7Q7RTY8 843 aa13.26□□□□□ -0.29
SHMT2-230ENST00000557427 NAXDQ8IW45 347 aa13.26□□□□□ -0.29
SHMT2-230ENST00000557427 REXO1L1PQ8IX06 675 aa13.26□□□□□ -0.29
SHMT2-230ENST00000557427 SCUBE3Q8IX30 993 aa13.26□□□□□ -0.29
SHMT2-230ENST00000557427 THEM5Q8N1Q8 247 aa13.26□□□□□ -0.29
SHMT2-230ENST00000557427 C1orf127Q8N9H9 656 aa13.26□□□□□ -0.29
SHMT2-230ENST00000557427 STKLD1Q8NE28 680 aa13.26□□□□□ -0.29
SHMT2-230ENST00000557427 CEP76Q8TAP6 659 aa13.26□□□□□ -0.29
SHMT2-230ENST00000557427 OSCP1Q8WVF1 389 aa13.26□□□□□ -0.29
SHMT2-230ENST00000557427 CEP63Q96MT8 703 aa13.26□□□□□ -0.29
SHMT2-230ENST00000557427 ERGIC2Q96RQ1 377 aa13.26□□□□□ -0.29
SHMT2-230ENST00000557427 LINC00597Q9H2U6 94 aa13.26□□□□□ -0.29
SHMT2-230ENST00000557427 KIF9Q9HAQ2 790 aa13.26□□□□□ -0.29
SHMT2-230ENST00000557427 AGPAT3Q9NRZ7 376 aa13.26□□□□□ -0.29
SHMT2-230ENST00000557427 DUS2Q9NX74 493 aaKnown RBP13.26□□□□□ -0.29
SHMT2-230ENST00000557427 CEP192Q8TEP8 1941 aa13.25□□□□□ -0.29
SHMT2-230ENST00000557427 TRABD2BA6NFA1 517 aa13.25□□□□□ -0.29
SHMT2-230ENST00000557427 DYNC1I1O14576 645 aa13.25□□□□□ -0.29
SHMT2-230ENST00000557427 KIAA0391O15091 583 aaKnown RBP13.25□□□□□ -0.29
SHMT2-230ENST00000557427 TMEM191BP0C7N4 346 aa13.25□□□□□ -0.29
SHMT2-230ENST00000557427 DLATP10515 647 aaKnown RBP13.25□□□□□ -0.29
SHMT2-230ENST00000557427 PRKCSHP14314 528 aaPredicted RBP13.25□□□□□ -0.29
SHMT2-230ENST00000557427 ITPKBP27987 946 aa13.25□□□□□ -0.29
SHMT2-230ENST00000557427 SLC14A1Q13336 389 aa13.25□□□□□ -0.29
SHMT2-230ENST00000557427 ZNF268Q14587 947 aaPredicted RBP13.25□□□□□ -0.29
SHMT2-230ENST00000557427 ZNF77Q15935 545 aa13.25□□□□□ -0.29
SHMT2-230ENST00000557427 MAN2A1Q16706 1144 aa13.25□□□□□ -0.29
SHMT2-230ENST00000557427 KNOP1Q1ED39 458 aaKnown RBP13.25□□□□□ -0.29
SHMT2-230ENST00000557427 MGAT5BQ3V5L5 792 aa13.25□□□□□ -0.29
SHMT2-230ENST00000557427 SV2CQ496J9 727 aa13.25□□□□□ -0.29
SHMT2-230ENST00000557427 SLC39A12Q504Y0 691 aa13.25□□□□□ -0.29
SHMT2-230ENST00000557427 FIGNQ5HY92 759 aa13.25□□□□□ -0.29
SHMT2-230ENST00000557427 MIIPQ5JXC2 388 aa13.25□□□□□ -0.29
SHMT2-230ENST00000557427 GLRX5Q86SX6 157 aa13.25□□□□□ -0.29
SHMT2-230ENST00000557427 MON1AQ86VX9 555 aa13.25□□□□□ -0.29
SHMT2-230ENST00000557427 TMTC1Q8IUR5 882 aa13.25□□□□□ -0.29
SHMT2-230ENST00000557427 CREBRFQ8IUR6 639 aa13.25□□□□□ -0.29
SHMT2-230ENST00000557427 ZC3H3Q8IXZ2 948 aaKnown RBP13.25□□□□□ -0.29
SHMT2-230ENST00000557427 ALLCQ8N6M5 410 aa13.25□□□□□ -0.29
SHMT2-230ENST00000557427 OR5B17Q8NGF7 314 aa13.25□□□□□ -0.29
SHMT2-230ENST00000557427 PIP4K2CQ8TBX8 421 aa13.25□□□□□ -0.29
SHMT2-230ENST00000557427 WHAMMQ8TF30 809 aa13.25□□□□□ -0.29
SHMT2-230ENST00000557427 EXOC4Q96A65 974 aa13.25□□□□□ -0.29
SHMT2-230ENST00000557427 CCDC127Q96BQ5 260 aa13.25□□□□□ -0.29
SHMT2-230ENST00000557427 ANKRD36BP1Q96IX9 119 aa13.25□□□□□ -0.29
SHMT2-230ENST00000557427 GCNAQ96QF7 691 aa13.25□□□□□ -0.29
SHMT2-230ENST00000557427 SLC22A12Q96S37 553 aa13.25□□□□□ -0.29
SHMT2-230ENST00000557427 MTMR12Q9C0I1 747 aa13.25□□□□□ -0.29
SHMT2-230ENST00000557427 KIAA1586Q9HCI6 787 aa13.25□□□□□ -0.29
SHMT2-230ENST00000557427 TOR4AQ9NXH8 423 aa13.25□□□□□ -0.29
SHMT2-230ENST00000557427 DSEQ9UL01 958 aa13.25□□□□□ -0.29
SHMT2-230ENST00000557427 PPP2R2CQ9Y2T4 447 aa13.25□□□□□ -0.29
SHMT2-230ENST00000557427 PCDHB9Q9Y5E1 797 aa13.25□□□□□ -0.29
SHMT2-230ENST00000557427 RIOK3O14730 519 aaKnown RBP13.24□□□□□ -0.29
SHMT2-230ENST00000557427 HUS1O60921 280 aa13.24□□□□□ -0.29
SHMT2-230ENST00000557427 GNA14O95837 355 aa13.24□□□□□ -0.29
SHMT2-230ENST00000557427 TNNC2P02585 160 aa13.24□□□□□ -0.29
SHMT2-230ENST00000557427 CYP11A1P05108 521 aa13.24□□□□□ -0.29
SHMT2-230ENST00000557427 TNNI1P19237 187 aa13.24□□□□□ -0.29
SHMT2-230ENST00000557427 PNPLA4P41247 253 aa13.24□□□□□ -0.29
SHMT2-230ENST00000557427 DPP6P42658 865 aa13.24□□□□□ -0.29
SHMT2-230ENST00000557427 TUFMP49411 452 aaKnown RBP13.24□□□□□ -0.29
SHMT2-230ENST00000557427 FKBP3Q00688 224 aaKnown RBP13.24□□□□□ -0.29
SHMT2-230ENST00000557427 VEPH1Q14D04 833 aa13.24□□□□□ -0.29
SHMT2-230ENST00000557427 SURF1Q15526 300 aa13.24□□□□□ -0.29
SHMT2-230ENST00000557427 SNRNP35Q16560 246 aaKnown RBP13.24□□□□□ -0.29
SHMT2-230ENST00000557427 DUOXA2Q1HG44 320 aa13.24□□□□□ -0.29
SHMT2-230ENST00000557427 BMT2Q1RMZ1 405 aa13.24□□□□□ -0.29
SHMT2-230ENST00000557427 EDRF1Q3B7T1 1238 aa13.24□□□□□ -0.29
SHMT2-230ENST00000557427 VWA3BQ502W6 1294 aa13.24□□□□□ -0.29
SHMT2-230ENST00000557427 FKBP15Q5T1M5 1219 aa13.24□□□□□ -0.29
SHMT2-230ENST00000557427 EMC10Q5UCC4 262 aa13.24□□□□□ -0.29
SHMT2-230ENST00000557427 LRRTM3Q86VH5 581 aa13.24□□□□□ -0.29
SHMT2-230ENST00000557427 IL17RCQ8NAC3 791 aa13.24□□□□□ -0.29
SHMT2-230ENST00000557427 XXYLT1Q8NBI6 393 aa13.24□□□□□ -0.29
SHMT2-230ENST00000557427 TXNDC5Q8NBS9 432 aaKnown RBP13.24□□□□□ -0.29
SHMT2-230ENST00000557427 KIF18AQ8NI77 898 aa13.24□□□□□ -0.29
SHMT2-230ENST00000557427 CPLX3Q8WVH0 158 aa13.24□□□□□ -0.29
SHMT2-230ENST00000557427 SPACA7Q96KW9 195 aa13.24□□□□□ -0.29
SHMT2-230ENST00000557427 ZNF560Q96MR9 790 aa13.24□□□□□ -0.29
SHMT2-230ENST00000557427 CYP2S1Q96SQ9 504 aa13.24□□□□□ -0.29
SHMT2-230ENST00000557427 PRORYQ9H606 182 aa13.24□□□□□ -0.29
SHMT2-230ENST00000557427 ZDHHC4Q9NPG8 344 aa13.24□□□□□ -0.29
SHMT2-230ENST00000557427 ABHD10Q9NUJ1 306 aa13.24□□□□□ -0.29
SHMT2-230ENST00000557427 KIAA1522Q9P206 1035 aaPredicted RBP13.24□□□□□ -0.29
SHMT2-230ENST00000557427 SIX4Q9UIU6 781 aa13.24□□□□□ -0.29
SHMT2-230ENST00000557427 ZMYM5Q9UJ78 669 aa13.24□□□□□ -0.29
SHMT2-230ENST00000557427 CAPN11Q9UMQ6 739 aa13.24□□□□□ -0.29
SHMT2-230ENST00000557427 APOBEC2Q9Y235 224 aaKnown RBP13.24□□□□□ -0.29
SHMT2-230ENST00000557427 UBE4BO95155 1302 aa13.23□□□□□ -0.29
SHMT2-230ENST00000557427 PTPRJQ12913 1337 aa13.23□□□□□ -0.29
SHMT2-230ENST00000557427 A0A1W2PQJ5 194 aa13.23□□□□□ -0.29
SHMT2-230ENST00000557427 J3QKU1 62 aa13.23□□□□□ -0.29
SHMT2-230ENST00000557427 EXOC3O60645 756 aa13.23□□□□□ -0.29
SHMT2-230ENST00000557427 ADAM23O75077 832 aa13.23□□□□□ -0.29
SHMT2-230ENST00000557427 TADA3O75528 432 aa13.23□□□□□ -0.29
SHMT2-230ENST00000557427 ALDH1A2O94788 518 aa13.23□□□□□ -0.29
SHMT2-230ENST00000557427 DKK1O94907 266 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms