RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 APOEP02649 317 aa11.81□□□□□ -0.52
SRP54-213ENST00000556994 BPGMP07738 259 aa11.81□□□□□ -0.52
SRP54-213ENST00000556994 CXCL8P10145 99 aa11.81□□□□□ -0.52
SRP54-213ENST00000556994 IL4RP24394 825 aa11.81□□□□□ -0.52
SRP54-213ENST00000556994 BACE1P56817 501 aa11.81□□□□□ -0.52
SRP54-213ENST00000556994 CXCL9Q07325 125 aa11.81□□□□□ -0.52
SRP54-213ENST00000556994 CDC16Q13042 620 aa11.81□□□□□ -0.52
SRP54-213ENST00000556994 STX3Q13277 289 aa11.81□□□□□ -0.52
SRP54-213ENST00000556994 ZNF667Q5HYK9 610 aa11.81□□□□□ -0.52
SRP54-213ENST00000556994 LGSNQ5TDP6 509 aa11.81□□□□□ -0.52
SRP54-213ENST00000556994 OR6B2Q6IFH4 312 aa11.81□□□□□ -0.52
SRP54-213ENST00000556994 EEPD1Q7L9B9 569 aa11.81□□□□□ -0.52
SRP54-213ENST00000556994 ADGRF2Q8IZF7 708 aa11.81□□□□□ -0.52
SRP54-213ENST00000556994 EFCAB3Q8N7B9 438 aa11.81□□□□□ -0.52
SRP54-213ENST00000556994 STKLD1Q8NE28 680 aa11.81□□□□□ -0.52
SRP54-213ENST00000556994 HIPK4Q8NE63 616 aa11.81□□□□□ -0.52
SRP54-213ENST00000556994 FLAD1Q8NFF5 587 aa11.81□□□□□ -0.52
SRP54-213ENST00000556994 PPP1R14CQ8TAE6 165 aa11.81□□□□□ -0.52
SRP54-213ENST00000556994 MCRS1Q96EZ8 462 aa11.81□□□□□ -0.52
SRP54-213ENST00000556994 ANKRD36BP1Q96IX9 119 aa11.81□□□□□ -0.52
SRP54-213ENST00000556994 NIFKQ9BYG3 293 aaKnown RBP11.81□□□□□ -0.52
SRP54-213ENST00000556994 EBF3Q9H4W6 596 aa11.81□□□□□ -0.52
SRP54-213ENST00000556994 PIH1D1Q9NWS0 290 aaKnown RBP11.81□□□□□ -0.52
SRP54-213ENST00000556994 CPSF2Q9P2I0 782 aaKnown RBP11.81□□□□□ -0.52
SRP54-213ENST00000556994 AFG3L2Q9Y4W6 797 aa11.81□□□□□ -0.52
SRP54-213ENST00000556994 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.8□□□□□ -0.52
SRP54-213ENST00000556994 PRPSAP2O60256 369 aa11.8□□□□□ -0.52
SRP54-213ENST00000556994 RNASEH1O60930 286 aaKnown RBP11.8□□□□□ -0.52
SRP54-213ENST00000556994 SNNO75324 88 aaPredicted RBP11.8□□□□□ -0.52
SRP54-213ENST00000556994 CSDE1O75534 798 aaKnown RBP11.8□□□□□ -0.52
SRP54-213ENST00000556994 KRT38O76015 456 aa11.8□□□□□ -0.52
SRP54-213ENST00000556994 ENDOD1O94919 500 aa11.8□□□□□ -0.52
SRP54-213ENST00000556994 KCNA4P22459 653 aa11.8□□□□□ -0.52
SRP54-213ENST00000556994 PRKCHP24723 683 aa11.8□□□□□ -0.52
SRP54-213ENST00000556994 GMPRP36959 345 aa11.8□□□□□ -0.52
SRP54-213ENST00000556994 STAT5BP51692 787 aa11.8□□□□□ -0.52
SRP54-213ENST00000556994 EPHB1P54762 984 aa11.8□□□□□ -0.52
SRP54-213ENST00000556994 RPL10AP62906 217 aaKnown RBP11.8□□□□□ -0.52
SRP54-213ENST00000556994 PTPN11Q06124 597 aaPredicted RBP11.8□□□□□ -0.52
SRP54-213ENST00000556994 LAMTOR4Q0VGL1 99 aa11.8□□□□□ -0.52
SRP54-213ENST00000556994 TARBP2Q15633 366 aaKnown RBP11.8□□□□□ -0.52
SRP54-213ENST00000556994 STXBP2Q15833 593 aa11.8□□□□□ -0.52
SRP54-213ENST00000556994 CA9Q16790 459 aa11.8□□□□□ -0.52
SRP54-213ENST00000556994 NBPF12Q5TAG4 269 aaPredicted RBP11.8□□□□□ -0.52
SRP54-213ENST00000556994 WDR78Q5VTH9 848 aa11.8□□□□□ -0.52
SRP54-213ENST00000556994 EEF1DP3Q658K8 133 aa11.8□□□□□ -0.52
SRP54-213ENST00000556994 DENND5BQ6ZUT9 1274 aa11.8□□□□□ -0.52
SRP54-213ENST00000556994 RSPH3Q86UC2 560 aa11.8□□□□□ -0.52
SRP54-213ENST00000556994 TRIM42Q8IWZ5 723 aa11.8□□□□□ -0.52
SRP54-213ENST00000556994 MTMR14Q8NCE2 650 aa11.8□□□□□ -0.52
SRP54-213ENST00000556994 ZBED3Q96IU2 234 aaPredicted RBP11.8□□□□□ -0.52
SRP54-213ENST00000556994 HEXIM2Q96MH2 286 aaKnown RBP11.8□□□□□ -0.52
SRP54-213ENST00000556994 ZNF778Q96MU6 729 aa11.8□□□□□ -0.52
SRP54-213ENST00000556994 TRAPPC9Q96Q05 1148 aa11.8□□□□□ -0.52
SRP54-213ENST00000556994 MAGEB5Q9BZ81 275 aa11.8□□□□□ -0.52
SRP54-213ENST00000556994 ACAD9Q9H845 621 aa11.8□□□□□ -0.52
SRP54-213ENST00000556994 DDX43Q9NXZ2 648 aaKnown RBP11.8□□□□□ -0.52
SRP54-213ENST00000556994 SIX4Q9UIU6 781 aa11.8□□□□□ -0.52
SRP54-213ENST00000556994 ZNF180Q9UJW8 692 aa11.8□□□□□ -0.52
SRP54-213ENST00000556994 MGAMO43451 1857 aa11.8□□□□□ -0.52
SRP54-213ENST00000556994 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.8□□□□□ -0.52
SRP54-213ENST00000556994 SDR42E2A6NKP2 422 aa11.8□□□□□ -0.52
SRP54-213ENST00000556994 PDE5AO76074 875 aa11.8□□□□□ -0.52
SRP54-213ENST00000556994 METTL18O95568 372 aa11.8□□□□□ -0.52
SRP54-213ENST00000556994 SERPINA6P08185 405 aa11.8□□□□□ -0.52
SRP54-213ENST00000556994 GPD1P21695 349 aa11.8□□□□□ -0.52
SRP54-213ENST00000556994 CPOXP36551 454 aa11.8□□□□□ -0.52
SRP54-213ENST00000556994 CCNFP41002 786 aa11.8□□□□□ -0.52
SRP54-213ENST00000556994 GPD2P43304 727 aa11.8□□□□□ -0.52
SRP54-213ENST00000556994 RGS7P49802 495 aa11.8□□□□□ -0.52
SRP54-213ENST00000556994 ZNF143P52747 638 aaPredicted RBP11.8□□□□□ -0.52
SRP54-213ENST00000556994 BCAR1P56945 870 aa11.8□□□□□ -0.52
SRP54-213ENST00000556994 PEX6Q13608 980 aa11.8□□□□□ -0.52
SRP54-213ENST00000556994 TFDP2Q14188 446 aa11.8□□□□□ -0.52
SRP54-213ENST00000556994 DNAL1Q4LDG9 190 aa11.8□□□□□ -0.52
SRP54-213ENST00000556994 PPP6R3Q5H9R7 873 aaPredicted RBP11.8□□□□□ -0.52
SRP54-213ENST00000556994 CFAP157Q5JU67 520 aa11.8□□□□□ -0.52
SRP54-213ENST00000556994 RASIP1Q5U651 963 aa11.8□□□□□ -0.52
SRP54-213ENST00000556994 LPCAT4Q643R3 524 aa11.8□□□□□ -0.52
SRP54-213ENST00000556994 RNF111Q6ZNA4 994 aa11.8□□□□□ -0.52
SRP54-213ENST00000556994 ATG14Q6ZNE5 492 aa11.8□□□□□ -0.52
SRP54-213ENST00000556994 TRIM50Q86XT4 487 aa11.8□□□□□ -0.52
SRP54-213ENST00000556994 PQLC3Q8N755 202 aa11.8□□□□□ -0.52
SRP54-213ENST00000556994 CCDC124Q96CT7 223 aaKnown RBP11.8□□□□□ -0.52
SRP54-213ENST00000556994 KLC2Q9H0B6 622 aa11.8□□□□□ -0.52
SRP54-213ENST00000556994 CYP4F11Q9HBI6 524 aa11.8□□□□□ -0.52
SRP54-213ENST00000556994 XAB2Q9HCS7 855 aaKnown RBP11.8□□□□□ -0.52
SRP54-213ENST00000556994 NGRNQ9NPE2 291 aaKnown RBP11.8□□□□□ -0.52
SRP54-213ENST00000556994 NRBP2Q9NSY0 501 aa11.8□□□□□ -0.52
SRP54-213ENST00000556994 DNAJC16Q9Y2G8 782 aa11.8□□□□□ -0.52
SRP54-213ENST00000556994 SIP14410 1827 aa11.79□□□□□ -0.52
SRP54-213ENST00000556994 E2F8A0AVK6 867 aa11.79□□□□□ -0.52
SRP54-213ENST00000556994 MAFO75444 373 aaPredicted RBP11.79□□□□□ -0.52
SRP54-213ENST00000556994 ITGB3P05106 788 aa11.79□□□□□ -0.52
SRP54-213ENST00000556994 NFICP08651 508 aa11.79□□□□□ -0.52
SRP54-213ENST00000556994 UBA1P22314 1058 aaKnown RBP11.79□□□□□ -0.52
SRP54-213ENST00000556994 ADORA2AP29274 412 aa11.79□□□□□ -0.52
SRP54-213ENST00000556994 CRABP2P29373 138 aa11.79□□□□□ -0.52
SRP54-213ENST00000556994 CRADDP78560 199 aa11.79□□□□□ -0.52
SRP54-213ENST00000556994 GRM1Q13255 1194 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms