RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 CXorf38Q8TB03 319 aa13.49□□□□□ -0.25
PSEN1-219ENST00000556951 WHAMMQ8TF30 809 aa13.49□□□□□ -0.25
PSEN1-219ENST00000556951 CEP63Q96MT8 703 aa13.49□□□□□ -0.25
PSEN1-219ENST00000556951 ACBD6Q9BR61 282 aa13.49□□□□□ -0.25
PSEN1-219ENST00000556951 XPO4Q9C0E2 1151 aaKnown RBP13.49□□□□□ -0.25
PSEN1-219ENST00000556951 RNF38Q9H0F5 515 aa13.49□□□□□ -0.25
PSEN1-219ENST00000556951 IKZF4Q9H2S9 585 aa13.49□□□□□ -0.25
PSEN1-219ENST00000556951 ABCB6Q9NP58 842 aa13.49□□□□□ -0.25
PSEN1-219ENST00000556951 DNAAF2Q9NVR5 837 aaKnown RBP13.49□□□□□ -0.25
PSEN1-219ENST00000556951 HCN2Q9UL51 889 aa13.49□□□□□ -0.25
PSEN1-219ENST00000556951 L1RE1Q9UN81 338 aa13.49□□□□□ -0.25
PSEN1-219ENST00000556951 TRAF3IP3Q9Y228 551 aa13.49□□□□□ -0.25
PSEN1-219ENST00000556951 STYXL1Q9Y6J8 313 aa13.49□□□□□ -0.25
PSEN1-219ENST00000556951 TRABD2BA6NFA1 517 aa13.48□□□□□ -0.25
PSEN1-219ENST00000556951 GOLGA6L6A8MZA4 724 aa13.48□□□□□ -0.25
PSEN1-219ENST00000556951 H0YCG3 227 aa13.48□□□□□ -0.25
PSEN1-219ENST00000556951 LEFTY2O00292 366 aa13.48□□□□□ -0.25
PSEN1-219ENST00000556951 SH3BP5O60239 455 aa13.48□□□□□ -0.25
PSEN1-219ENST00000556951 PPP1R37O75864 691 aa13.48□□□□□ -0.25
PSEN1-219ENST00000556951 ALDH1A2O94788 518 aa13.48□□□□□ -0.25
PSEN1-219ENST00000556951 GNA14O95837 355 aa13.48□□□□□ -0.25
PSEN1-219ENST00000556951 CFIP05156 583 aa13.48□□□□□ -0.25
PSEN1-219ENST00000556951 ACAT1P24752 427 aaKnown RBP13.48□□□□□ -0.25
PSEN1-219ENST00000556951 ABCD1P33897 745 aa13.48□□□□□ -0.25
PSEN1-219ENST00000556951 HOXD12P35452 270 aa13.48□□□□□ -0.25
PSEN1-219ENST00000556951 RIPPLY3P57055 190 aa13.48□□□□□ -0.25
PSEN1-219ENST00000556951 GTF2BQ00403 316 aa13.48□□□□□ -0.25
PSEN1-219ENST00000556951 GFPT1Q06210 699 aaPredicted RBP13.48□□□□□ -0.25
PSEN1-219ENST00000556951 NR1I3Q14994 352 aa13.48□□□□□ -0.25
PSEN1-219ENST00000556951 DHCR24Q15392 516 aa13.48□□□□□ -0.25
PSEN1-219ENST00000556951 HSP90AA4PQ58FG1 418 aa13.48□□□□□ -0.25
PSEN1-219ENST00000556951 INTS6LQ5JSJ4 861 aaKnown RBP13.48□□□□□ -0.25
PSEN1-219ENST00000556951 GPR155Q7Z3F1 870 aa13.48□□□□□ -0.25
PSEN1-219ENST00000556951 FILIP1Q7Z7B0 1213 aa13.48□□□□□ -0.25
PSEN1-219ENST00000556951 SLCO6A1Q86UG4 719 aa13.48□□□□□ -0.25
PSEN1-219ENST00000556951 SLC41A1Q8IVJ1 513 aa13.48□□□□□ -0.25
PSEN1-219ENST00000556951 ZC3H3Q8IXZ2 948 aaKnown RBP13.48□□□□□ -0.25
PSEN1-219ENST00000556951 GOLGA5Q8TBA6 731 aa13.48□□□□□ -0.25
PSEN1-219ENST00000556951 HMGB4Q8WW32 186 aa13.48□□□□□ -0.25
PSEN1-219ENST00000556951 HVCN1Q96D96 273 aa13.48□□□□□ -0.25
PSEN1-219ENST00000556951 NAP1L5Q96NT1 182 aaPredicted RBP13.48□□□□□ -0.25
PSEN1-219ENST00000556951 ACCSQ96QU6 501 aa13.48□□□□□ -0.25
PSEN1-219ENST00000556951 PNKPQ96T60 521 aa13.48□□□□□ -0.25
PSEN1-219ENST00000556951 GTPBP2Q9BX10 602 aaKnown RBP13.48□□□□□ -0.25
PSEN1-219ENST00000556951 MYO18AQ92614 2054 aaKnown RBP13.48□□□□□ -0.25
PSEN1-219ENST00000556951 A0A1B0GTH6 734 aa13.47□□□□□ -0.25
PSEN1-219ENST00000556951 K7ENM7 598 aa13.47□□□□□ -0.25
PSEN1-219ENST00000556951 ARHGAP33O14559 1287 aa13.47□□□□□ -0.25
PSEN1-219ENST00000556951 GABRDO14764 452 aa13.47□□□□□ -0.25
PSEN1-219ENST00000556951 CETN3O15182 167 aa13.47□□□□□ -0.25
PSEN1-219ENST00000556951 OPHN1O60890 802 aa13.47□□□□□ -0.25
PSEN1-219ENST00000556951 KAT7O95251 611 aa13.47□□□□□ -0.25
PSEN1-219ENST00000556951 PTMAP06454 111 aaKnown RBP13.47□□□□□ -0.25
PSEN1-219ENST00000556951 TPM2P07951 284 aa13.47□□□□□ -0.25
PSEN1-219ENST00000556951 GP1BBP13224 206 aa13.47□□□□□ -0.25
PSEN1-219ENST00000556951 RPL13P26373 211 aaKnown RBP13.47□□□□□ -0.25
PSEN1-219ENST00000556951 DPP6P42658 865 aa13.47□□□□□ -0.25
PSEN1-219ENST00000556951 USP46P62068 366 aa13.47□□□□□ -0.25
PSEN1-219ENST00000556951 SNRPFP62306 86 aaKnown RBP13.47□□□□□ -0.25
PSEN1-219ENST00000556951 TSPY1Q01534 308 aa13.47□□□□□ -0.25
PSEN1-219ENST00000556951 KRT31Q15323 416 aa13.47□□□□□ -0.25
PSEN1-219ENST00000556951 NFIL3Q16649 462 aa13.47□□□□□ -0.25
PSEN1-219ENST00000556951 SV2CQ496J9 727 aa13.47□□□□□ -0.25
PSEN1-219ENST00000556951 CFAP221Q4G0U5 840 aa13.47□□□□□ -0.25
PSEN1-219ENST00000556951 HSF5Q4G112 596 aaPredicted RBP13.47□□□□□ -0.25
PSEN1-219ENST00000556951 APTXQ7Z2E3 356 aaKnown RBP13.47□□□□□ -0.25
PSEN1-219ENST00000556951 CEP76Q8TAP6 659 aa13.47□□□□□ -0.25
PSEN1-219ENST00000556951 SPACA7Q96KW9 195 aa13.47□□□□□ -0.25
PSEN1-219ENST00000556951 CD248Q9HCU0 757 aa13.47□□□□□ -0.25
PSEN1-219ENST00000556951 POLMQ9NP87 494 aaPredicted RBP13.47□□□□□ -0.25
PSEN1-219ENST00000556951 DDX43Q9NXZ2 648 aaKnown RBP13.47□□□□□ -0.25
PSEN1-219ENST00000556951 CGNQ9P2M7 1197 aaKnown RBP13.47□□□□□ -0.25
PSEN1-219ENST00000556951 DNMT3LQ9UJW3 386 aa13.47□□□□□ -0.25
PSEN1-219ENST00000556951 MYOFQ9NZM1 2061 aa13.47□□□□□ -0.25
PSEN1-219ENST00000556951 GOLGA4Q13439 2230 aaKnown RBP13.47□□□□□ -0.25
PSEN1-219ENST00000556951 CEP192Q8TEP8 1941 aa13.47□□□□□ -0.25
PSEN1-219ENST00000556951 ERVH48-1M5A8F1 160 aa13.46□□□□□ -0.25
PSEN1-219ENST00000556951 SLC28A2O43868 658 aa13.46□□□□□ -0.25
PSEN1-219ENST00000556951 ATP2C2O75185 946 aa13.46□□□□□ -0.25
PSEN1-219ENST00000556951 GABRG2P18507 467 aa13.46□□□□□ -0.25
PSEN1-219ENST00000556951 ADSSP30520 456 aa13.46□□□□□ -0.25
PSEN1-219ENST00000556951 EIF2DP41214 584 aaKnown RBP13.46□□□□□ -0.25
PSEN1-219ENST00000556951 TNFRSF4P43489 277 aa13.46□□□□□ -0.25
PSEN1-219ENST00000556951 COPB1P53618 953 aaKnown RBP13.46□□□□□ -0.25
PSEN1-219ENST00000556951 SLC7A9P82251 487 aa13.46□□□□□ -0.25
PSEN1-219ENST00000556951 POU5F1Q01860 360 aaKnown RBP13.46□□□□□ -0.25
PSEN1-219ENST00000556951 ZNF33AQ06730 810 aa13.46□□□□□ -0.25
PSEN1-219ENST00000556951 ADAM9Q13443 819 aa13.46□□□□□ -0.25
PSEN1-219ENST00000556951 BYSLQ13895 437 aaKnown RBP13.46□□□□□ -0.25
PSEN1-219ENST00000556951 HS1BP3Q53T59 392 aa13.46□□□□□ -0.25
PSEN1-219ENST00000556951 EOGTQ5NDL2 527 aa13.46□□□□□ -0.25
PSEN1-219ENST00000556951 FAM171BQ6P995 826 aa13.46□□□□□ -0.25
PSEN1-219ENST00000556951 TOGARAM2Q6ZUX3 1019 aa13.46□□□□□ -0.25
PSEN1-219ENST00000556951 HS2ST1Q7LGA3 356 aa13.46□□□□□ -0.25
PSEN1-219ENST00000556951 TMPRSS7Q7RTY8 843 aa13.46□□□□□ -0.25
PSEN1-219ENST00000556951 CREBRFQ8IUR6 639 aa13.46□□□□□ -0.25
PSEN1-219ENST00000556951 SYCP3Q8IZU3 236 aa13.46□□□□□ -0.25
PSEN1-219ENST00000556951 KIAA1958Q8N8K9 716 aa13.46□□□□□ -0.25
PSEN1-219ENST00000556951 ZSWIM2Q8NEG5 633 aa13.46□□□□□ -0.25
PSEN1-219ENST00000556951 FAM84AQ96KN4 292 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms