RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 SPHK2Q9NRA0 654 aa8.51□□□□□ -1.05
VTI1B-206ENST00000556461 CLIC5Q9NZA1 410 aa8.51□□□□□ -1.05
VTI1B-206ENST00000556461 TBC1D14Q9P2M4 693 aa8.51□□□□□ -1.05
VTI1B-206ENST00000556461 CYTH4Q9UIA0 394 aa8.51□□□□□ -1.05
VTI1B-206ENST00000556461 HCN2Q9UL51 889 aa8.51□□□□□ -1.05
VTI1B-206ENST00000556461 PCDHGA2Q9Y5H1 932 aa8.51□□□□□ -1.05
VTI1B-206ENST00000556461 DNAH14Q0VDD8 3507 aa8.51□□□□□ -1.05
VTI1B-206ENST00000556461 CEP250Q9BV73 2442 aa8.51□□□□□ -1.05
VTI1B-206ENST00000556461 DCHS1Q96JQ0 3298 aa8.5□□□□□ -1.05
VTI1B-206ENST00000556461 SLC12A8A0AV02 714 aa8.5□□□□□ -1.05
VTI1B-206ENST00000556461 GTPBP10A4D1E9 387 aaKnown RBP8.5□□□□□ -1.05
VTI1B-206ENST00000556461 KCNJ18B7U540 433 aa8.5□□□□□ -1.05
VTI1B-206ENST00000556461 HOXC11O43248 304 aaPredicted RBP8.5□□□□□ -1.05
VTI1B-206ENST00000556461 HRO43593 1189 aa8.5□□□□□ -1.05
VTI1B-206ENST00000556461 ADH1CP00326 375 aa8.5□□□□□ -1.05
VTI1B-206ENST00000556461 PRKCSHP14314 528 aaPredicted RBP8.5□□□□□ -1.05
VTI1B-206ENST00000556461 HNRNPLP14866 589 aaKnown RBP eCLIP8.5□□□□□ -1.05
VTI1B-206ENST00000556461 GPD2P43304 727 aa8.5□□□□□ -1.05
VTI1B-206ENST00000556461 PSEN1P49768 467 aa8.5□□□□□ -1.05
VTI1B-206ENST00000556461 SLC8A3P57103 927 aa8.5□□□□□ -1.05
VTI1B-206ENST00000556461 DAOAP59103 153 aa8.5□□□□□ -1.05
VTI1B-206ENST00000556461 GAD2Q05329 585 aa8.5□□□□□ -1.05
VTI1B-206ENST00000556461 KCNJ12Q14500 433 aa8.5□□□□□ -1.05
VTI1B-206ENST00000556461 LPAL2Q16609 132 aa8.5□□□□□ -1.05
VTI1B-206ENST00000556461 ANO4Q32M45 955 aa8.5□□□□□ -1.05
VTI1B-206ENST00000556461 C2orf27AQ580R0 203 aa8.5□□□□□ -1.05
VTI1B-206ENST00000556461 BSPRYQ5W0U4 402 aa8.5□□□□□ -1.05
VTI1B-206ENST00000556461 ZC3H14Q6PJT7 736 aaKnown RBP8.5□□□□□ -1.05
VTI1B-206ENST00000556461 TPGS1Q6ZTW0 290 aa8.5□□□□□ -1.05
VTI1B-206ENST00000556461 ETFBKMTQ8IXQ9 262 aa8.5□□□□□ -1.05
VTI1B-206ENST00000556461 USP33Q8TEY7 942 aa8.5□□□□□ -1.05
VTI1B-206ENST00000556461 ATRIPQ8WXE1 791 aa8.5□□□□□ -1.05
VTI1B-206ENST00000556461 SHC3Q92529 594 aa8.5□□□□□ -1.05
VTI1B-206ENST00000556461 BHMTQ93088 406 aa8.5□□□□□ -1.05
VTI1B-206ENST00000556461 HHIPQ96QV1 700 aa8.5□□□□□ -1.05
VTI1B-206ENST00000556461 TUBGCP2Q9BSJ2 902 aa8.5□□□□□ -1.05
VTI1B-206ENST00000556461 MIS12Q9H081 205 aa8.5□□□□□ -1.05
VTI1B-206ENST00000556461 NDST4Q9H3R1 872 aa8.5□□□□□ -1.05
VTI1B-206ENST00000556461 ARHGEF4Q9NR80 690 aa8.5□□□□□ -1.05
VTI1B-206ENST00000556461 TAB2Q9NYJ8 693 aa8.5□□□□□ -1.05
VTI1B-206ENST00000556461 MARCH2Q9P0N8 246 aa8.5□□□□□ -1.05
VTI1B-206ENST00000556461 APEX2Q9UBZ4 518 aa8.5□□□□□ -1.05
VTI1B-206ENST00000556461 TJP2Q9UDY2 1190 aa8.5□□□□□ -1.05
VTI1B-206ENST00000556461 SFMBT1Q9UHJ3 866 aa8.5□□□□□ -1.05
VTI1B-206ENST00000556461 DACH1Q9UI36 760 aa8.5□□□□□ -1.05
VTI1B-206ENST00000556461 NFE2L3Q9Y4A8 694 aa8.5□□□□□ -1.05
VTI1B-206ENST00000556461 SDK1Q7Z5N4 2213 aa8.5□□□□□ -1.05
VTI1B-206ENST00000556461 NEDD8-MDP1E9PL57 170 aa8.49□□□□□ -1.05
VTI1B-206ENST00000556461 FOXN3O00409 490 aaPredicted RBP8.49□□□□□ -1.05
VTI1B-206ENST00000556461 MSI1O43347 362 aaKnown RBP8.49□□□□□ -1.05
VTI1B-206ENST00000556461 THAP12O43422 761 aa8.49□□□□□ -1.05
VTI1B-206ENST00000556461 TULP3O75386 442 aa8.49□□□□□ -1.05
VTI1B-206ENST00000556461 LETM1O95202 739 aaPredicted RBP8.49□□□□□ -1.05
VTI1B-206ENST00000556461 KAT7O95251 611 aa8.49□□□□□ -1.05
VTI1B-206ENST00000556461 FYNP06241 537 aa8.49□□□□□ -1.05
VTI1B-206ENST00000556461 GNA15P30679 374 aa8.49□□□□□ -1.05
VTI1B-206ENST00000556461 CORO1AP31146 461 aaKnown RBP8.49□□□□□ -1.05
VTI1B-206ENST00000556461 CLCN1P35523 988 aa8.49□□□□□ -1.05
VTI1B-206ENST00000556461 USP8P40818 1118 aa8.49□□□□□ -1.05
VTI1B-206ENST00000556461 RPL34P49207 117 aaKnown RBP8.49□□□□□ -1.05
VTI1B-206ENST00000556461 KLK7P49862 253 aa8.49□□□□□ -1.05
VTI1B-206ENST00000556461 MFAP3P55082 362 aa8.49□□□□□ -1.05
VTI1B-206ENST00000556461 DMC1Q14565 340 aa8.49□□□□□ -1.05
VTI1B-206ENST00000556461 FBXO43Q4G163 708 aa8.49□□□□□ -1.05
VTI1B-206ENST00000556461 TCP11X2Q5H9J9 407 aa8.49□□□□□ -1.05
VTI1B-206ENST00000556461 CDKAL1Q5VV42 579 aa8.49□□□□□ -1.05
VTI1B-206ENST00000556461 BTBD8Q5XKL5 378 aa8.49□□□□□ -1.05
VTI1B-206ENST00000556461 TOGARAM2Q6ZUX3 1019 aa8.49□□□□□ -1.05
VTI1B-206ENST00000556461 RSRC2Q7L4I2 434 aaKnown RBP8.49□□□□□ -1.05
VTI1B-206ENST00000556461 TADA2BQ86TJ2 420 aa8.49□□□□□ -1.05
VTI1B-206ENST00000556461 WDR5BQ86VZ2 330 aa8.49□□□□□ -1.05
VTI1B-206ENST00000556461 LONP2Q86WA8 852 aa8.49□□□□□ -1.05
VTI1B-206ENST00000556461 DENND1CQ8IV53 801 aa8.49□□□□□ -1.05
VTI1B-206ENST00000556461 FMNL3Q8IVF7 1028 aa8.49□□□□□ -1.05
VTI1B-206ENST00000556461 SIX6OS1Q8N1H7 587 aa8.49□□□□□ -1.05
VTI1B-206ENST00000556461 SCML4Q8N228 414 aa8.49□□□□□ -1.05
VTI1B-206ENST00000556461 ARHGAP18Q8N392 663 aa8.49□□□□□ -1.05
VTI1B-206ENST00000556461 WDTC1Q8N5D0 677 aa8.49□□□□□ -1.05
VTI1B-206ENST00000556461 CCDC33Q8N5R6 958 aa8.49□□□□□ -1.05
VTI1B-206ENST00000556461 ENOX1Q8TC92 643 aaKnown RBP8.49□□□□□ -1.05
VTI1B-206ENST00000556461 ZNF606Q8WXB4 792 aa8.49□□□□□ -1.05
VTI1B-206ENST00000556461 OTUB2Q96DC9 234 aa8.49□□□□□ -1.05
VTI1B-206ENST00000556461 HSFY1Q96LI6 401 aa8.49□□□□□ -1.05
VTI1B-206ENST00000556461 PNKPQ96T60 521 aa8.49□□□□□ -1.05
VTI1B-206ENST00000556461 FAM126AQ9BYI3 521 aaPredicted RBP8.49□□□□□ -1.05
VTI1B-206ENST00000556461 EPC1Q9H2F5 836 aa8.49□□□□□ -1.05
VTI1B-206ENST00000556461 SEMA4AQ9H3S1 761 aa8.49□□□□□ -1.05
VTI1B-206ENST00000556461 CNGB3Q9NQW8 809 aa8.49□□□□□ -1.05
VTI1B-206ENST00000556461 PLK2Q9NYY3 685 aa8.49□□□□□ -1.05
VTI1B-206ENST00000556461 TMEM63CQ9P1W3 806 aa8.49□□□□□ -1.05
VTI1B-206ENST00000556461 LSM7Q9UK45 103 aaKnown RBP8.49□□□□□ -1.05
VTI1B-206ENST00000556461 DNAJC12Q9UKB3 198 aa8.49□□□□□ -1.05
VTI1B-206ENST00000556461 AGO1Q9UL18 857 aaKnown RBP8.49□□□□□ -1.05
VTI1B-206ENST00000556461 CLEC4EQ9ULY5 219 aa8.49□□□□□ -1.05
VTI1B-206ENST00000556461 SMG5Q9UPR3 1016 aaKnown RBP8.49□□□□□ -1.05
VTI1B-206ENST00000556461 FHOD1Q9Y613 1164 aa8.49□□□□□ -1.05
VTI1B-206ENST00000556461 A0A0A0MRY4 1105 aa8.48□□□□□ -1.05
VTI1B-206ENST00000556461 FAM170AA1A519 330 aa8.48□□□□□ -1.05
VTI1B-206ENST00000556461 SGK1O00141 431 aa8.48□□□□□ -1.05
VTI1B-206ENST00000556461 PAPSS1O43252 624 aaPredicted RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms