RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 CDO1Q16878 200 aa9.61□□□□□ -0.87
ACTN1-218ENST00000556343 C10orf120Q5SQS8 335 aa9.61□□□□□ -0.87
ACTN1-218ENST00000556343 SEL1L2Q5TEA6 688 aa9.61□□□□□ -0.87
ACTN1-218ENST00000556343 PAPD7Q5XG87 772 aaKnown RBP9.61□□□□□ -0.87
ACTN1-218ENST00000556343 KLHDC10Q6PID8 442 aa9.61□□□□□ -0.87
ACTN1-218ENST00000556343 PDZD4Q76G19 769 aaPredicted RBP9.61□□□□□ -0.87
ACTN1-218ENST00000556343 POLNQ7Z5Q5 900 aa9.61□□□□□ -0.87
ACTN1-218ENST00000556343 SPRED2Q7Z698 418 aa9.61□□□□□ -0.87
ACTN1-218ENST00000556343 SCD5Q86SK9 330 aa9.61□□□□□ -0.87
ACTN1-218ENST00000556343 PSTKQ8IV42 348 aaKnown RBP9.61□□□□□ -0.87
ACTN1-218ENST00000556343 RCOR2Q8IZ40 523 aa9.61□□□□□ -0.87
ACTN1-218ENST00000556343 CMASQ8NFW8 434 aaPredicted RBP9.61□□□□□ -0.87
ACTN1-218ENST00000556343 EDEM1Q92611 657 aa9.61□□□□□ -0.87
ACTN1-218ENST00000556343 CENPIQ92674 756 aaPredicted RBP9.61□□□□□ -0.87
ACTN1-218ENST00000556343 NT5C3BQ969T7 300 aa9.61□□□□□ -0.87
ACTN1-218ENST00000556343 PGAP3Q96FM1 320 aaPredicted RBP9.61□□□□□ -0.87
ACTN1-218ENST00000556343 HES6Q96HZ4 224 aa9.61□□□□□ -0.87
ACTN1-218ENST00000556343 WDR24Q96S15 920 aa9.61□□□□□ -0.87
ACTN1-218ENST00000556343 NPY6RQ99463 290 aa9.61□□□□□ -0.87
ACTN1-218ENST00000556343 GAS2L1Q99501 681 aaPredicted RBP9.61□□□□□ -0.87
ACTN1-218ENST00000556343 PRKD2Q9BZL6 878 aa9.61□□□□□ -0.87
ACTN1-218ENST00000556343 ATXN3LQ9H3M9 355 aa9.61□□□□□ -0.87
ACTN1-218ENST00000556343 IGFLR1Q9H665 355 aa9.61□□□□□ -0.87
ACTN1-218ENST00000556343 WDCPQ9H6R7 721 aa9.61□□□□□ -0.87
ACTN1-218ENST00000556343 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.61□□□□□ -0.87
ACTN1-218ENST00000556343 DDIT4Q9NX09 232 aa9.61□□□□□ -0.87
ACTN1-218ENST00000556343 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.61□□□□□ -0.87
ACTN1-218ENST00000556343 DNMT3LQ9UJW3 386 aa9.61□□□□□ -0.87
ACTN1-218ENST00000556343 USP18Q9UMW8 372 aa9.61□□□□□ -0.87
ACTN1-218ENST00000556343 PCDHA3Q9Y5H8 950 aa9.61□□□□□ -0.87
ACTN1-218ENST00000556343 HCFC2Q9Y5Z7 792 aa9.61□□□□□ -0.87
ACTN1-218ENST00000556343 PDE4DIPQ5VU43 2346 aa9.6□□□□□ -0.87
ACTN1-218ENST00000556343 CCDC195A0A1B0GUA6 201 aa9.6□□□□□ -0.87
ACTN1-218ENST00000556343 ZNF840PA6NDX5 716 aa9.6□□□□□ -0.87
ACTN1-218ENST00000556343 RFXAPO00287 272 aa9.6□□□□□ -0.87
ACTN1-218ENST00000556343 CES2O00748 559 aa9.6□□□□□ -0.87
ACTN1-218ENST00000556343 KCNK3O14649 394 aa9.6□□□□□ -0.87
ACTN1-218ENST00000556343 ENC1O14682 589 aa9.6□□□□□ -0.87
ACTN1-218ENST00000556343 TLR5O60602 858 aa9.6□□□□□ -0.87
ACTN1-218ENST00000556343 URI1O94763 535 aaPredicted RBP9.6□□□□□ -0.87
ACTN1-218ENST00000556343 ENDOD1O94919 500 aa9.6□□□□□ -0.87
ACTN1-218ENST00000556343 MYL4P12829 197 aa9.6□□□□□ -0.87
ACTN1-218ENST00000556343 HMGA1P17096 107 aaKnown RBP9.6□□□□□ -0.87
ACTN1-218ENST00000556343 HOXB8P17481 243 aaPredicted RBP9.6□□□□□ -0.87
ACTN1-218ENST00000556343 GABRR2P28476 465 aa9.6□□□□□ -0.87
ACTN1-218ENST00000556343 MIPP30301 263 aa9.6□□□□□ -0.87
ACTN1-218ENST00000556343 CCR1P32246 355 aa9.6□□□□□ -0.87
ACTN1-218ENST00000556343 CTNNA1P35221 906 aaKnown RBP9.6□□□□□ -0.87
ACTN1-218ENST00000556343 ZNF135P52742 658 aaPredicted RBP9.6□□□□□ -0.87
ACTN1-218ENST00000556343 COPS2P61201 443 aa9.6□□□□□ -0.87
ACTN1-218ENST00000556343 COG7P83436 770 aa9.6□□□□□ -0.87
ACTN1-218ENST00000556343 OGDHQ02218 1023 aa9.6□□□□□ -0.87
ACTN1-218ENST00000556343 CKAP4Q07065 602 aaKnown RBP9.6□□□□□ -0.87
ACTN1-218ENST00000556343 EFEMP1Q12805 493 aa9.6□□□□□ -0.87
ACTN1-218ENST00000556343 NNTQ13423 1086 aa9.6□□□□□ -0.87
ACTN1-218ENST00000556343 KRT81Q14533 505 aa9.6□□□□□ -0.87
ACTN1-218ENST00000556343 PDK2Q15119 407 aa9.6□□□□□ -0.87
ACTN1-218ENST00000556343 C15orf59Q2T9L4 293 aaPredicted RBP9.6□□□□□ -0.87
ACTN1-218ENST00000556343 BRMS1LQ5PSV4 323 aa9.6□□□□□ -0.87
ACTN1-218ENST00000556343 ERMARDQ5T6L9 678 aa9.6□□□□□ -0.87
ACTN1-218ENST00000556343 CCDC181Q5TID7 509 aa9.6□□□□□ -0.87
ACTN1-218ENST00000556343 MSANTD2Q6P1R3 559 aa9.6□□□□□ -0.87
ACTN1-218ENST00000556343 HFE2Q6ZVN8 426 aa9.6□□□□□ -0.87
ACTN1-218ENST00000556343 BHLHA9Q7RTU4 235 aa9.6□□□□□ -0.87
ACTN1-218ENST00000556343 ADGRD2Q7Z7M1 963 aa9.6□□□□□ -0.87
ACTN1-218ENST00000556343 UNC45BQ8IWX7 931 aa9.6□□□□□ -0.87
ACTN1-218ENST00000556343 KATNAL2Q8IYT4 538 aa9.6□□□□□ -0.87
ACTN1-218ENST00000556343 EFHBQ8N7U6 833 aa9.6□□□□□ -0.87
ACTN1-218ENST00000556343 KCTD6Q8NC69 237 aa9.6□□□□□ -0.87
ACTN1-218ENST00000556343 DQX1Q8TE96 717 aaKnown RBP9.6□□□□□ -0.87
ACTN1-218ENST00000556343 TEKT4Q8WW24 435 aa9.6□□□□□ -0.87
ACTN1-218ENST00000556343 MAIP1Q8WWC4 291 aa9.6□□□□□ -0.87
ACTN1-218ENST00000556343 RBM41Q96IZ5 413 aaKnown RBP9.6□□□□□ -0.87
ACTN1-218ENST00000556343 PIWIL1Q96J94 861 aaKnown RBP9.6□□□□□ -0.87
ACTN1-218ENST00000556343 CORO1BQ9BR76 489 aa9.6□□□□□ -0.87
ACTN1-218ENST00000556343 MAK16Q9BXY0 300 aaKnown RBP9.6□□□□□ -0.87
ACTN1-218ENST00000556343 TRIM7Q9C029 511 aa9.6□□□□□ -0.87
ACTN1-218ENST00000556343 SMOC2Q9H3U7 446 aa9.6□□□□□ -0.87
ACTN1-218ENST00000556343 NMUR1Q9HB89 426 aa9.6□□□□□ -0.87
ACTN1-218ENST00000556343 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.6□□□□□ -0.87
ACTN1-218ENST00000556343 MARCH2Q9P0N8 246 aa9.6□□□□□ -0.87
ACTN1-218ENST00000556343 PCSK1NQ9UHG2 260 aa9.6□□□□□ -0.87
ACTN1-218ENST00000556343 SNX12Q9UMY4 172 aa9.6□□□□□ -0.87
ACTN1-218ENST00000556343 TLR6Q9Y2C9 796 aa9.6□□□□□ -0.87
ACTN1-218ENST00000556343 HBS1LQ9Y450 684 aaKnown RBP9.6□□□□□ -0.87
ACTN1-218ENST00000556343 CLUHO75153 1309 aa9.59□□□□□ -0.87
ACTN1-218ENST00000556343 SYNJ2BP-COX16A0A087WUM0 186 aa9.59□□□□□ -0.87
ACTN1-218ENST00000556343 TRAV19A0A0A6YYK7 116 aa9.59□□□□□ -0.87
ACTN1-218ENST00000556343 SLC12A8A0AV02 714 aa9.59□□□□□ -0.87
ACTN1-218ENST00000556343 EPOPA6NHQ4 379 aa9.59□□□□□ -0.87
ACTN1-218ENST00000556343 LRCH4O75427 683 aa9.59□□□□□ -0.87
ACTN1-218ENST00000556343 APOEP02649 317 aa9.59□□□□□ -0.87
ACTN1-218ENST00000556343 F11P03951 625 aa9.59□□□□□ -0.87
ACTN1-218ENST00000556343 ATP1A1P05023 1023 aaKnown RBP9.59□□□□□ -0.87
ACTN1-218ENST00000556343 FYNP06241 537 aa9.59□□□□□ -0.87
ACTN1-218ENST00000556343 GJC1P36383 396 aa9.59□□□□□ -0.87
ACTN1-218ENST00000556343 CXCR3P49682 368 aa9.59□□□□□ -0.87
ACTN1-218ENST00000556343 DNA2P51530 1060 aa9.59□□□□□ -0.87
ACTN1-218ENST00000556343 TBX4P57082 545 aa9.59□□□□□ -0.87
ACTN1-218ENST00000556343 TRIP4Q15650 581 aaPredicted RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms