RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 ADGRG1Q9Y653 693 aa12.11□□□□□ -0.47
SLIRP-205ENST00000556310 DMDP11532 3685 aa12.1□□□□□ -0.47
SLIRP-205ENST00000556310 BECN2A8MW95 431 aa12.1□□□□□ -0.47
SLIRP-205ENST00000556310 PES1O00541 588 aaKnown RBP12.1□□□□□ -0.47
SLIRP-205ENST00000556310 MDM4O15151 490 aa12.1□□□□□ -0.47
SLIRP-205ENST00000556310 MED7O43513 233 aa12.1□□□□□ -0.47
SLIRP-205ENST00000556310 ADH1CP00326 375 aa12.1□□□□□ -0.47
SLIRP-205ENST00000556310 IRF1P10914 325 aa12.1□□□□□ -0.47
SLIRP-205ENST00000556310 DRD1P21728 446 aa12.1□□□□□ -0.47
SLIRP-205ENST00000556310 NBL1P41271 181 aa12.1□□□□□ -0.47
SLIRP-205ENST00000556310 CCR3P51677 355 aa12.1□□□□□ -0.47
SLIRP-205ENST00000556310 TYRO3Q06418 890 aa12.1□□□□□ -0.47
SLIRP-205ENST00000556310 GRSF1Q12849 480 aaKnown RBP eCLIP12.1□□□□□ -0.47
SLIRP-205ENST00000556310 KRT31Q15323 416 aa12.1□□□□□ -0.47
SLIRP-205ENST00000556310 DHCR24Q15392 516 aa12.1□□□□□ -0.47
SLIRP-205ENST00000556310 GAB4Q2WGN9 574 aa12.1□□□□□ -0.47
SLIRP-205ENST00000556310 ZNF528Q3MIS6 628 aa12.1□□□□□ -0.47
SLIRP-205ENST00000556310 FSTL4Q6MZW2 842 aa12.1□□□□□ -0.47
SLIRP-205ENST00000556310 PMF1Q6P1K2 205 aa12.1□□□□□ -0.47
SLIRP-205ENST00000556310 Q6ZS52 159 aa12.1□□□□□ -0.47
SLIRP-205ENST00000556310 PACS2Q86VP3 889 aa12.1□□□□□ -0.47
SLIRP-205ENST00000556310 BBS7Q8IWZ6 715 aa12.1□□□□□ -0.47
SLIRP-205ENST00000556310 CD101Q93033 1021 aa12.1□□□□□ -0.47
SLIRP-205ENST00000556310 HSFY1Q96LI6 401 aa12.1□□□□□ -0.47
SLIRP-205ENST00000556310 P2RY13Q9BPV8 354 aa12.1□□□□□ -0.47
SLIRP-205ENST00000556310 TAB2Q9NYJ8 693 aa12.1□□□□□ -0.47
SLIRP-205ENST00000556310 LSM7Q9UK45 103 aaKnown RBP12.1□□□□□ -0.47
SLIRP-205ENST00000556310 AJAP1Q9UKB5 411 aaPredicted RBP12.1□□□□□ -0.47
SLIRP-205ENST00000556310 NUDT5Q9UKK9 219 aa12.1□□□□□ -0.47
SLIRP-205ENST00000556310 ATG2BQ96BY7 2078 aa12.09□□□□□ -0.47
SLIRP-205ENST00000556310 PROB1E7EW31 1015 aa12.09□□□□□ -0.47
SLIRP-205ENST00000556310 THAP12O43422 761 aa12.09□□□□□ -0.47
SLIRP-205ENST00000556310 GREM1O60565 184 aa12.09□□□□□ -0.47
SLIRP-205ENST00000556310 LETM1O95202 739 aaPredicted RBP12.09□□□□□ -0.47
SLIRP-205ENST00000556310 TPM2P07951 284 aa12.09□□□□□ -0.47
SLIRP-205ENST00000556310 SP9P0CG40 484 aa12.09□□□□□ -0.47
SLIRP-205ENST00000556310 ADH5P11766 374 aa12.09□□□□□ -0.47
SLIRP-205ENST00000556310 USP8P40818 1118 aa12.09□□□□□ -0.47
SLIRP-205ENST00000556310 EIF2DP41214 584 aaKnown RBP12.09□□□□□ -0.47
SLIRP-205ENST00000556310 RGS7P49802 495 aa12.09□□□□□ -0.47
SLIRP-205ENST00000556310 DAOAP59103 153 aa12.09□□□□□ -0.47
SLIRP-205ENST00000556310 GAS6Q14393 721 aa12.09□□□□□ -0.47
SLIRP-205ENST00000556310 PPP2R5DQ14738 602 aa12.09□□□□□ -0.47
SLIRP-205ENST00000556310 FBXO43Q4G163 708 aa12.09□□□□□ -0.47
SLIRP-205ENST00000556310 NAIF1Q69YI7 327 aaPredicted RBP12.09□□□□□ -0.47
SLIRP-205ENST00000556310 DPY19L2P1Q6NXN4 242 aa12.09□□□□□ -0.47
SLIRP-205ENST00000556310 CAVIN1Q6NZI2 390 aaKnown RBP12.09□□□□□ -0.47
SLIRP-205ENST00000556310 HTR3DQ70Z44 454 aa12.09□□□□□ -0.47
SLIRP-205ENST00000556310 RSRC2Q7L4I2 434 aaKnown RBP12.09□□□□□ -0.47
SLIRP-205ENST00000556310 MIB1Q86YT6 1006 aa12.09□□□□□ -0.47
SLIRP-205ENST00000556310 ADGRG2Q8IZP9 1017 aa12.09□□□□□ -0.47
SLIRP-205ENST00000556310 SPEM1Q8N4L4 309 aa12.09□□□□□ -0.47
SLIRP-205ENST00000556310 ZNF606Q8WXB4 792 aa12.09□□□□□ -0.47
SLIRP-205ENST00000556310 IRGQQ8WZA9 623 aa12.09□□□□□ -0.47
SLIRP-205ENST00000556310 WBP2Q969T9 261 aa12.09□□□□□ -0.47
SLIRP-205ENST00000556310 PHOX2BQ99453 314 aa12.09□□□□□ -0.47
SLIRP-205ENST00000556310 OLA1Q9NTK5 396 aaKnown RBP12.09□□□□□ -0.47
SLIRP-205ENST00000556310 FANCLQ9NW38 375 aa12.09□□□□□ -0.47
SLIRP-205ENST00000556310 RASAL2Q9UJF2 1139 aa12.09□□□□□ -0.47
SLIRP-205ENST00000556310 DNAJC12Q9UKB3 198 aa12.09□□□□□ -0.47
SLIRP-205ENST00000556310 STRIP2Q9ULQ0 834 aa12.09□□□□□ -0.47
SLIRP-205ENST00000556310 ZFHX2Q9C0A1 2572 aaPredicted RBP12.09□□□□□ -0.47
SLIRP-205ENST00000556310 USP34Q70CQ2 3546 aa12.08□□□□□ -0.48
SLIRP-205ENST00000556310 YJEFN3A6XGL0 299 aa12.08□□□□□ -0.48
SLIRP-205ENST00000556310 E7ENQ6 273 aa12.08□□□□□ -0.48
SLIRP-205ENST00000556310 HOXC11O43248 304 aaPredicted RBP12.08□□□□□ -0.48
SLIRP-205ENST00000556310 STC2O76061 302 aa12.08□□□□□ -0.48
SLIRP-205ENST00000556310 FBXO21O94952 628 aa12.08□□□□□ -0.48
SLIRP-205ENST00000556310 PAPSS2O95340 614 aaPredicted RBP12.08□□□□□ -0.48
SLIRP-205ENST00000556310 EGFP01133 1207 aa12.08□□□□□ -0.48
SLIRP-205ENST00000556310 LCP1P13796 627 aa12.08□□□□□ -0.48
SLIRP-205ENST00000556310 OPRD1P41143 372 aa12.08□□□□□ -0.48
SLIRP-205ENST00000556310 GPD2P43304 727 aa12.08□□□□□ -0.48
SLIRP-205ENST00000556310 RPL34P49207 117 aaKnown RBP12.08□□□□□ -0.48
SLIRP-205ENST00000556310 GALK1P51570 392 aa12.08□□□□□ -0.48
SLIRP-205ENST00000556310 COG7P83436 770 aa12.08□□□□□ -0.48
SLIRP-205ENST00000556310 KCNMA1Q12791 1236 aa12.08□□□□□ -0.48
SLIRP-205ENST00000556310 EFEMP1Q12805 493 aa12.08□□□□□ -0.48
SLIRP-205ENST00000556310 LY6G5CQ5SRR4 150 aa12.08□□□□□ -0.48
SLIRP-205ENST00000556310 KLHDC7AQ5VTJ3 777 aa12.08□□□□□ -0.48
SLIRP-205ENST00000556310 BSPRYQ5W0U4 402 aa12.08□□□□□ -0.48
SLIRP-205ENST00000556310 BTBD8Q5XKL5 378 aa12.08□□□□□ -0.48
SLIRP-205ENST00000556310 DENND1BQ6P3S1 775 aa12.08□□□□□ -0.48
SLIRP-205ENST00000556310 RHBDF2Q6PJF5 856 aa12.08□□□□□ -0.48
SLIRP-205ENST00000556310 ZC3H14Q6PJT7 736 aaKnown RBP12.08□□□□□ -0.48
SLIRP-205ENST00000556310 Q6ZNB5 142 aa12.08□□□□□ -0.48
SLIRP-205ENST00000556310 ANKRD20A12PQ8NF67 263 aa12.08□□□□□ -0.48
SLIRP-205ENST00000556310 STK32AQ8WU08 396 aa12.08□□□□□ -0.48
SLIRP-205ENST00000556310 NDRG1Q92597 394 aaKnown RBP12.08□□□□□ -0.48
SLIRP-205ENST00000556310 LSM14BQ9BX40 385 aaKnown RBP12.08□□□□□ -0.48
SLIRP-205ENST00000556310 NAT10Q9H0A0 1025 aaKnown RBP12.08□□□□□ -0.48
SLIRP-205ENST00000556310 VPS16Q9H269 839 aa12.08□□□□□ -0.48
SLIRP-205ENST00000556310 FBRSL1Q9HCM7 1045 aaKnown RBP12.08□□□□□ -0.48
SLIRP-205ENST00000556310 ACP6Q9NPH0 428 aa12.08□□□□□ -0.48
SLIRP-205ENST00000556310 PLCB1Q9NQ66 1216 aa12.08□□□□□ -0.48
SLIRP-205ENST00000556310 SPHK2Q9NRA0 654 aa12.08□□□□□ -0.48
SLIRP-205ENST00000556310 MARCH2Q9P0N8 246 aa12.08□□□□□ -0.48
SLIRP-205ENST00000556310 FHOD1Q9Y613 1164 aa12.08□□□□□ -0.48
SLIRP-205ENST00000556310 WDR87Q6ZQQ6 2873 aa12.08□□□□□ -0.48
SLIRP-205ENST00000556310 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms