RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 SPEM2Q0P670 501 aa13.24□□□□□ -0.29
SNX6-207ENST00000556303 SRSF5Q13243 272 aaKnown RBP13.24□□□□□ -0.29
SNX6-207ENST00000556303 LPAL2Q16609 132 aa13.24□□□□□ -0.29
SNX6-207ENST00000556303 RSPO4Q2I0M5 234 aaPredicted RBP13.24□□□□□ -0.29
SNX6-207ENST00000556303 ANO4Q32M45 955 aa13.24□□□□□ -0.29
SNX6-207ENST00000556303 ISM2Q6H9L7 571 aa13.24□□□□□ -0.29
SNX6-207ENST00000556303 KLHL10Q6JEL2 608 aa13.24□□□□□ -0.29
SNX6-207ENST00000556303 LCLAT1Q6UWP7 414 aa13.24□□□□□ -0.29
SNX6-207ENST00000556303 DGLUCYQ7Z3D6 616 aa13.24□□□□□ -0.29
SNX6-207ENST00000556303 C12orf40Q86WS4 652 aa13.24□□□□□ -0.29
SNX6-207ENST00000556303 TMEM25Q86YD3 366 aa13.24□□□□□ -0.29
SNX6-207ENST00000556303 TRIM59Q8IWR1 403 aa13.24□□□□□ -0.29
SNX6-207ENST00000556303 TERB1Q8NA31 727 aa13.24□□□□□ -0.29
SNX6-207ENST00000556303 IL17RCQ8NAC3 791 aa13.24□□□□□ -0.29
SNX6-207ENST00000556303 KCTD13Q8WZ19 329 aa13.24□□□□□ -0.29
SNX6-207ENST00000556303 JAKMIP2Q96AA8 810 aa13.24□□□□□ -0.29
SNX6-207ENST00000556303 FAM81BQ96LP2 452 aa13.24□□□□□ -0.29
SNX6-207ENST00000556303 RTKNQ9BST9 563 aa13.24□□□□□ -0.29
SNX6-207ENST00000556303 POLMQ9NP87 494 aaPredicted RBP13.24□□□□□ -0.29
SNX6-207ENST00000556303 PARD6AQ9NPB6 346 aa13.24□□□□□ -0.29
SNX6-207ENST00000556303 OLA1Q9NTK5 396 aaKnown RBP13.24□□□□□ -0.29
SNX6-207ENST00000556303 CHMP5Q9NZZ3 219 aa13.24□□□□□ -0.29
SNX6-207ENST00000556303 KIAA1468Q9P260 1216 aa13.24□□□□□ -0.29
SNX6-207ENST00000556303 TSPAN16Q9UKR8 245 aa13.24□□□□□ -0.29
SNX6-207ENST00000556303 STRIP2Q9ULQ0 834 aa13.24□□□□□ -0.29
SNX6-207ENST00000556303 NCOR2Q9Y618 2525 aa13.24□□□□□ -0.29
SNX6-207ENST00000556303 MYO16Q9Y6X6 1858 aa13.23□□□□□ -0.29
SNX6-207ENST00000556303 GADD45BO75293 160 aaPredicted RBP13.23□□□□□ -0.29
SNX6-207ENST00000556303 STC2O76061 302 aa13.23□□□□□ -0.29
SNX6-207ENST00000556303 IRF1P10914 325 aa13.23□□□□□ -0.29
SNX6-207ENST00000556303 CHRM1P11229 460 aaPredicted RBP13.23□□□□□ -0.29
SNX6-207ENST00000556303 PRKCSHP14314 528 aaPredicted RBP13.23□□□□□ -0.29
SNX6-207ENST00000556303 PXNP49023 591 aaPredicted RBP13.23□□□□□ -0.29
SNX6-207ENST00000556303 TKTL1P51854 596 aa13.23□□□□□ -0.29
SNX6-207ENST00000556303 SEC13P55735 322 aa13.23□□□□□ -0.29
SNX6-207ENST00000556303 YWHAGP61981 247 aaKnown RBP eCLIP13.23□□□□□ -0.29
SNX6-207ENST00000556303 KCNH2Q12809 1159 aa13.23□□□□□ -0.29
SNX6-207ENST00000556303 BYSLQ13895 437 aaKnown RBP13.23□□□□□ -0.29
SNX6-207ENST00000556303 E2F5Q15329 346 aa13.23□□□□□ -0.29
SNX6-207ENST00000556303 ELF2Q15723 593 aa13.23□□□□□ -0.29
SNX6-207ENST00000556303 CNGA2Q16280 664 aa13.23□□□□□ -0.29
SNX6-207ENST00000556303 PLK5Q496M5 336 aa13.23□□□□□ -0.29
SNX6-207ENST00000556303 PRR23CQ6ZRP0 262 aa13.23□□□□□ -0.29
SNX6-207ENST00000556303 TTC30AQ86WT1 665 aa13.23□□□□□ -0.29
SNX6-207ENST00000556303 EHBP1Q8NDI1 1231 aa13.23□□□□□ -0.29
SNX6-207ENST00000556303 LMO3Q8TAP4 145 aa13.23□□□□□ -0.29
SNX6-207ENST00000556303 NETO1Q8TDF5 533 aa13.23□□□□□ -0.29
SNX6-207ENST00000556303 BBS2Q9BXC9 721 aa13.23□□□□□ -0.29
SNX6-207ENST00000556303 LRRC4Q9HBW1 653 aa13.23□□□□□ -0.29
SNX6-207ENST00000556303 CNGB3Q9NQW8 809 aa13.23□□□□□ -0.29
SNX6-207ENST00000556303 FBXO10Q9UK96 956 aa13.23□□□□□ -0.29
SNX6-207ENST00000556303 CDV3Q9UKY7 258 aaKnown RBP13.23□□□□□ -0.29
SNX6-207ENST00000556303 KIAA1549LQ6ZVL6 1849 aa13.23□□□□□ -0.29
SNX6-207ENST00000556303 O00370 1275 aa13.22□□□□□ -0.29
SNX6-207ENST00000556303 SCAMP3O14828 347 aaKnown RBP13.22□□□□□ -0.29
SNX6-207ENST00000556303 NPC1O15118 1278 aa13.22□□□□□ -0.29
SNX6-207ENST00000556303 AFPP02771 609 aaKnown RBP13.22□□□□□ -0.29
SNX6-207ENST00000556303 ZNF806P0C7X5 589 aa13.22□□□□□ -0.29
SNX6-207ENST00000556303 TYRP14679 529 aa13.22□□□□□ -0.29
SNX6-207ENST00000556303 CD19P15391 556 aa13.22□□□□□ -0.29
SNX6-207ENST00000556303 TIE1P35590 1138 aa13.22□□□□□ -0.29
SNX6-207ENST00000556303 PDE4CQ08493 712 aa13.22□□□□□ -0.29
SNX6-207ENST00000556303 GOLGA7BQ2TAP0 167 aa13.22□□□□□ -0.29
SNX6-207ENST00000556303 PKDCCQ504Y2 493 aa13.22□□□□□ -0.29
SNX6-207ENST00000556303 SPDYCQ5MJ68 293 aa13.22□□□□□ -0.29
SNX6-207ENST00000556303 GRAMD4Q6IC98 578 aa13.22□□□□□ -0.29
SNX6-207ENST00000556303 TMEM270Q6UE05 265 aa13.22□□□□□ -0.29
SNX6-207ENST00000556303 RSRC2Q7L4I2 434 aaKnown RBP13.22□□□□□ -0.29
SNX6-207ENST00000556303 KBTBD6Q86V97 674 aa13.22□□□□□ -0.29
SNX6-207ENST00000556303 PPM1KQ8N3J5 372 aa13.22□□□□□ -0.29
SNX6-207ENST00000556303 CPXM2Q8N436 756 aa13.22□□□□□ -0.29
SNX6-207ENST00000556303 TXNDC5Q8NBS9 432 aaKnown RBP13.22□□□□□ -0.29
SNX6-207ENST00000556303 WBP2Q969T9 261 aa13.22□□□□□ -0.29
SNX6-207ENST00000556303 PLD4Q96BZ4 506 aa13.22□□□□□ -0.29
SNX6-207ENST00000556303 HSFY1Q96LI6 401 aa13.22□□□□□ -0.29
SNX6-207ENST00000556303 IPO9Q96P70 1041 aaKnown RBP13.22□□□□□ -0.29
SNX6-207ENST00000556303 SRRTQ9BXP5 876 aaKnown RBP13.22□□□□□ -0.29
SNX6-207ENST00000556303 MARCH2Q9P0N8 246 aa13.22□□□□□ -0.29
SNX6-207ENST00000556303 RWDD2AQ9UIY3 292 aa13.22□□□□□ -0.29
SNX6-207ENST00000556303 CTNND2Q9UQB3 1225 aa13.22□□□□□ -0.29
SNX6-207ENST00000556303 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.22□□□□□ -0.29
SNX6-207ENST00000556303 GON4LQ3T8J9 2241 aa13.22□□□□□ -0.29
SNX6-207ENST00000556303 ABCA7Q8IZY2 2146 aa13.22□□□□□ -0.29
SNX6-207ENST00000556303 NEDD8-MDP1E9PL57 170 aa13.21□□□□□ -0.29
SNX6-207ENST00000556303 GFRA2O00451 464 aa13.21□□□□□ -0.29
SNX6-207ENST00000556303 KLF8O95600 359 aaPredicted RBP13.21□□□□□ -0.29
SNX6-207ENST00000556303 LATS1O95835 1130 aa13.21□□□□□ -0.29
SNX6-207ENST00000556303 PENKP01210 267 aaPredicted RBP13.21□□□□□ -0.29
SNX6-207ENST00000556303 HOXC13P31276 330 aa13.21□□□□□ -0.29
SNX6-207ENST00000556303 ZNF132P52740 706 aa13.21□□□□□ -0.29
SNX6-207ENST00000556303 LIMK1P53667 647 aa13.21□□□□□ -0.29
SNX6-207ENST00000556303 ATXN1P54253 815 aaKnown RBP13.21□□□□□ -0.29
SNX6-207ENST00000556303 ZNF445P59923 1031 aa13.21□□□□□ -0.29
SNX6-207ENST00000556303 MESP2Q0VG99 397 aa13.21□□□□□ -0.29
SNX6-207ENST00000556303 EFEMP1Q12805 493 aa13.21□□□□□ -0.29
SNX6-207ENST00000556303 LRMPQ12912 555 aa13.21□□□□□ -0.29
SNX6-207ENST00000556303 MEA1Q16626 185 aa13.21□□□□□ -0.29
SNX6-207ENST00000556303 PLA2G2CQ5R387 149 aa13.21□□□□□ -0.29
SNX6-207ENST00000556303 ENOSF1Q7L5Y1 443 aa13.21□□□□□ -0.29
SNX6-207ENST00000556303 MIB1Q86YT6 1006 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms