RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 CRYBB1P53674 252 aaPredicted RBP7.2□□□□□ -1.26
SLIRP-204ENST00000555890 ADAM17P78536 824 aa7.2□□□□□ -1.26
SLIRP-204ENST00000555890 TMEM62Q0P6H9 643 aa7.2□□□□□ -1.26
SLIRP-204ENST00000555890 MYO1EQ12965 1108 aa7.2□□□□□ -1.26
SLIRP-204ENST00000555890 TMEM132DQ14C87 1099 aa7.2□□□□□ -1.26
SLIRP-204ENST00000555890 SLC10A6Q3KNW5 377 aa7.2□□□□□ -1.26
SLIRP-204ENST00000555890 TTC39BQ5VTQ0 682 aaPredicted RBP7.2□□□□□ -1.26
SLIRP-204ENST00000555890 JADE1Q6IE81 842 aa7.2□□□□□ -1.26
SLIRP-204ENST00000555890 C11orf63Q6NUN7 778 aa7.2□□□□□ -1.26
SLIRP-204ENST00000555890 TMCO3Q6UWJ1 677 aa7.2□□□□□ -1.26
SLIRP-204ENST00000555890 ZNF572Q7Z3I7 529 aaPredicted RBP7.2□□□□□ -1.26
SLIRP-204ENST00000555890 NT5DC3Q86UY8 548 aa7.2□□□□□ -1.26
SLIRP-204ENST00000555890 DNAAF5Q86Y56 855 aa7.2□□□□□ -1.26
SLIRP-204ENST00000555890 PALB2Q86YC2 1186 aa7.2□□□□□ -1.26
SLIRP-204ENST00000555890 EFCAB13Q8IY85 973 aa7.2□□□□□ -1.26
SLIRP-204ENST00000555890 MMGT1Q8N4V1 131 aa7.2□□□□□ -1.26
SLIRP-204ENST00000555890 CEP120Q8N960 986 aa7.2□□□□□ -1.26
SLIRP-204ENST00000555890 COG1Q8WTW3 980 aa7.2□□□□□ -1.26
SLIRP-204ENST00000555890 ZNF653Q96CK0 615 aa7.2□□□□□ -1.26
SLIRP-204ENST00000555890 ARHGEF26Q96DR7 871 aa7.2□□□□□ -1.26
SLIRP-204ENST00000555890 LIN37Q96GY3 246 aaPredicted RBP7.2□□□□□ -1.26
SLIRP-204ENST00000555890 VCPIP1Q96JH7 1222 aa7.2□□□□□ -1.26
SLIRP-204ENST00000555890 FAM84AQ96KN4 292 aa7.2□□□□□ -1.26
SLIRP-204ENST00000555890 RPS6KC1Q96S38 1066 aa7.2□□□□□ -1.26
SLIRP-204ENST00000555890 PSMB7Q99436 277 aa7.2□□□□□ -1.26
SLIRP-204ENST00000555890 OSMRQ99650 979 aa7.2□□□□□ -1.26
SLIRP-204ENST00000555890 PARD6BQ9BYG5 372 aa7.2□□□□□ -1.26
SLIRP-204ENST00000555890 TRIM6Q9C030 488 aaPredicted RBP7.2□□□□□ -1.26
SLIRP-204ENST00000555890 DNAI2Q9GZS0 605 aa7.2□□□□□ -1.26
SLIRP-204ENST00000555890 CYP3A43Q9HB55 503 aa7.2□□□□□ -1.26
SLIRP-204ENST00000555890 APOBEC3GQ9HC16 384 aaKnown RBP7.2□□□□□ -1.26
SLIRP-204ENST00000555890 POLMQ9NP87 494 aaPredicted RBP7.2□□□□□ -1.26
SLIRP-204ENST00000555890 AVENQ9NQS1 362 aaPredicted RBP7.2□□□□□ -1.26
SLIRP-204ENST00000555890 CISHQ9NSE2 258 aa7.2□□□□□ -1.26
SLIRP-204ENST00000555890 TAS2R14Q9NYV8 317 aa7.2□□□□□ -1.26
SLIRP-204ENST00000555890 NXF1Q9UBU9 619 aaKnown RBP7.2□□□□□ -1.26
SLIRP-204ENST00000555890 CNOT8Q9UFF9 292 aaKnown RBP7.2□□□□□ -1.26
SLIRP-204ENST00000555890 GTF3C4Q9UKN8 822 aa7.2□□□□□ -1.26
SLIRP-204ENST00000555890 EFR3BQ9Y2G0 817 aa7.2□□□□□ -1.26
SLIRP-204ENST00000555890 C2CD2Q9Y426 696 aa7.2□□□□□ -1.26
SLIRP-204ENST00000555890 NBPF19A0A087WUL8 3843 aa7.2□□□□□ -1.26
SLIRP-204ENST00000555890 MICAL3Q7RTP6 2002 aa7.2□□□□□ -1.26
SLIRP-204ENST00000555890 PDCD11Q14690 1871 aaKnown RBP7.19□□□□□ -1.26
SLIRP-204ENST00000555890 A0A1W2PP55 124 aa7.19□□□□□ -1.26
SLIRP-204ENST00000555890 TARSL2A2RTX5 802 aaKnown RBP7.19□□□□□ -1.26
SLIRP-204ENST00000555890 CCDC151A5D8V7 595 aa7.19□□□□□ -1.26
SLIRP-204ENST00000555890 KCNK3O14649 394 aa7.19□□□□□ -1.26
SLIRP-204ENST00000555890 ATP8B1O43520 1251 aa7.19□□□□□ -1.26
SLIRP-204ENST00000555890 XPOTO43592 962 aaKnown RBP7.19□□□□□ -1.26
SLIRP-204ENST00000555890 CEP104O60308 925 aa7.19□□□□□ -1.26
SLIRP-204ENST00000555890 BUB1BO60566 1050 aaPredicted RBP7.19□□□□□ -1.26
SLIRP-204ENST00000555890 NBNO60934 754 aa7.19□□□□□ -1.26
SLIRP-204ENST00000555890 LSM8O95777 96 aaKnown RBP7.19□□□□□ -1.26
SLIRP-204ENST00000555890 CXCL10P02778 98 aa7.19□□□□□ -1.26
SLIRP-204ENST00000555890 CYP1A1P04798 512 aaPredicted RBP7.19□□□□□ -1.26
SLIRP-204ENST00000555890 ITGB3P05106 788 aa7.19□□□□□ -1.26
SLIRP-204ENST00000555890 NFICP08651 508 aa7.19□□□□□ -1.26
SLIRP-204ENST00000555890 PAEPP09466 180 aa7.19□□□□□ -1.26
SLIRP-204ENST00000555890 RHOXF2BP0C7M4 288 aa7.19□□□□□ -1.26
SLIRP-204ENST00000555890 UNGP13051 313 aaPredicted RBP7.19□□□□□ -1.26
SLIRP-204ENST00000555890 ATF7P17544 494 aaPredicted RBP7.19□□□□□ -1.26
SLIRP-204ENST00000555890 CD58P19256 250 aa7.19□□□□□ -1.26
SLIRP-204ENST00000555890 ELAVL4P26378 380 aaKnown RBP7.19□□□□□ -1.26
SLIRP-204ENST00000555890 GRNP28799 593 aaKnown RBP7.19□□□□□ -1.26
SLIRP-204ENST00000555890 CXCR5P32302 372 aa7.19□□□□□ -1.26
SLIRP-204ENST00000555890 SOX9P48436 509 aa7.19□□□□□ -1.26
SLIRP-204ENST00000555890 CSRP3P50461 194 aa7.19□□□□□ -1.26
SLIRP-204ENST00000555890 DNA2P51530 1060 aa7.19□□□□□ -1.26
SLIRP-204ENST00000555890 TNNC1P63316 161 aa7.19□□□□□ -1.26
SLIRP-204ENST00000555890 HTRA4P83105 476 aaPredicted RBP7.19□□□□□ -1.26
SLIRP-204ENST00000555890 WDR72Q3MJ13 1102 aa7.19□□□□□ -1.26
SLIRP-204ENST00000555890 GLE1Q53GS7 698 aaKnown RBP7.19□□□□□ -1.26
SLIRP-204ENST00000555890 FBXO38Q6PIJ6 1188 aa7.19□□□□□ -1.26
SLIRP-204ENST00000555890 RUFY4Q6ZNE9 571 aa7.19□□□□□ -1.26
SLIRP-204ENST00000555890 C1orf210Q8IVY1 113 aa7.19□□□□□ -1.26
SLIRP-204ENST00000555890 TMEM192Q8IY95 271 aa7.19□□□□□ -1.26
SLIRP-204ENST00000555890 MCOLN2Q8IZK6 566 aa7.19□□□□□ -1.26
SLIRP-204ENST00000555890 UBL4BQ8N7F7 174 aa7.19□□□□□ -1.26
SLIRP-204ENST00000555890 UBR7Q8N806 425 aa7.19□□□□□ -1.26
SLIRP-204ENST00000555890 SMRP1Q8NCR6 262 aa7.19□□□□□ -1.26
SLIRP-204ENST00000555890 TMEM35BQ8NCS4 154 aa7.19□□□□□ -1.26
SLIRP-204ENST00000555890 SPATA4Q8NEY3 305 aa7.19□□□□□ -1.26
SLIRP-204ENST00000555890 BEST2Q8NFU1 509 aa7.19□□□□□ -1.26
SLIRP-204ENST00000555890 ELMO3Q96BJ8 720 aa7.19□□□□□ -1.26
SLIRP-204ENST00000555890 HES6Q96HZ4 224 aa7.19□□□□□ -1.26
SLIRP-204ENST00000555890 HPDLQ96IR7 371 aa7.19□□□□□ -1.26
SLIRP-204ENST00000555890 MSLNLQ96KJ4 702 aa7.19□□□□□ -1.26
SLIRP-204ENST00000555890 NAP1L3Q99457 506 aaPredicted RBP7.19□□□□□ -1.26
SLIRP-204ENST00000555890 RHOXF2Q9BQY4 288 aa7.19□□□□□ -1.26
SLIRP-204ENST00000555890 NUP85Q9BW27 656 aa7.19□□□□□ -1.26
SLIRP-204ENST00000555890 CELF4Q9BZC1 486 aaKnown RBP7.19□□□□□ -1.26
SLIRP-204ENST00000555890 ZNF518BQ9C0D4 1074 aa7.19□□□□□ -1.26
SLIRP-204ENST00000555890 XYLT2Q9H1B5 865 aa7.19□□□□□ -1.26
SLIRP-204ENST00000555890 EPC1Q9H2F5 836 aa7.19□□□□□ -1.26
SLIRP-204ENST00000555890 MRPL47Q9HD33 250 aaKnown RBP7.19□□□□□ -1.26
SLIRP-204ENST00000555890 ABCB6Q9NP58 842 aa7.19□□□□□ -1.26
SLIRP-204ENST00000555890 ARFGAP3Q9NP61 516 aa7.19□□□□□ -1.26
SLIRP-204ENST00000555890 OSGEPQ9NPF4 335 aa7.19□□□□□ -1.26
SLIRP-204ENST00000555890 ACP6Q9NPH0 428 aa7.19□□□□□ -1.26
SLIRP-204ENST00000555890 DPP3Q9NY33 737 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms