RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 Q9H521 79 aa11.09□□□□□ -0.63
MTHFD1-210ENST00000555252 GALNT8Q9NY28 637 aa11.09□□□□□ -0.63
MTHFD1-210ENST00000555252 PPM1HQ9ULR3 514 aa11.09□□□□□ -0.63
MTHFD1-210ENST00000555252 WDR90Q96KV7 1748 aa11.09□□□□□ -0.63
MTHFD1-210ENST00000555252 FAM237BA0A1B0GVD1 139 aa11.08□□□□□ -0.63
MTHFD1-210ENST00000555252 ZSCAN9O15535 394 aaPredicted RBP11.08□□□□□ -0.63
MTHFD1-210ENST00000555252 B4GALT4O60513 344 aa11.08□□□□□ -0.63
MTHFD1-210ENST00000555252 IL18RAPO95256 599 aa11.08□□□□□ -0.63
MTHFD1-210ENST00000555252 BAG2O95816 211 aa11.08□□□□□ -0.63
MTHFD1-210ENST00000555252 KRT10P13645 584 aa11.08□□□□□ -0.63
MTHFD1-210ENST00000555252 ETS1P14921 441 aa11.08□□□□□ -0.63
MTHFD1-210ENST00000555252 DESP17661 470 aa11.08□□□□□ -0.63
MTHFD1-210ENST00000555252 CPOXP36551 454 aa11.08□□□□□ -0.63
MTHFD1-210ENST00000555252 RPL5P46777 297 aaKnown RBP11.08□□□□□ -0.63
MTHFD1-210ENST00000555252 MYL6P60660 151 aa11.08□□□□□ -0.63
MTHFD1-210ENST00000555252 FSTL1Q12841 308 aa11.08□□□□□ -0.63
MTHFD1-210ENST00000555252 EFTUD2Q15029 972 aaKnown RBP eCLIP11.08□□□□□ -0.635e-6■■■■■ 49.7
MTHFD1-210ENST00000555252 FNBP1LQ5T0N5 605 aa11.08□□□□□ -0.63
MTHFD1-210ENST00000555252 ZFYVE27Q5T4F4 411 aa11.08□□□□□ -0.63
MTHFD1-210ENST00000555252 KAZNQ674X7 775 aa11.08□□□□□ -0.63
MTHFD1-210ENST00000555252 MPZL3Q6UWV2 235 aa11.08□□□□□ -0.63
MTHFD1-210ENST00000555252 B3GNT6Q6ZMB0 384 aa11.08□□□□□ -0.63
MTHFD1-210ENST00000555252 TSHZ1Q6ZSZ6 1077 aa11.08□□□□□ -0.63
MTHFD1-210ENST00000555252 ZBTB33Q86T24 672 aa11.08□□□□□ -0.63
MTHFD1-210ENST00000555252 PRPF39Q86UA1 669 aaKnown RBP11.08□□□□□ -0.63
MTHFD1-210ENST00000555252 ALYREFQ86V81 257 aaKnown RBP11.08□□□□□ -0.63
MTHFD1-210ENST00000555252 LRRC43Q8N309 656 aa11.08□□□□□ -0.63
MTHFD1-210ENST00000555252 MARVELD2Q8N4S9 558 aa11.08□□□□□ -0.63
MTHFD1-210ENST00000555252 CATSPER2Q96P56 530 aa11.08□□□□□ -0.63
MTHFD1-210ENST00000555252 MTMR12Q9C0I1 747 aa11.08□□□□□ -0.63
MTHFD1-210ENST00000555252 SPATC1LQ9H0A9 340 aa11.08□□□□□ -0.63
MTHFD1-210ENST00000555252 DNAAF2Q9NVR5 837 aaKnown RBP11.08□□□□□ -0.63
MTHFD1-210ENST00000555252 BTBD7Q9P203 1132 aa11.08□□□□□ -0.63
MTHFD1-210ENST00000555252 ARMCX1Q9P291 453 aa11.08□□□□□ -0.63
MTHFD1-210ENST00000555252 THEGQ9P2T0 379 aa11.08□□□□□ -0.63
MTHFD1-210ENST00000555252 ITGA11Q9UKX5 1188 aa11.08□□□□□ -0.63
MTHFD1-210ENST00000555252 PLLPQ9Y342 182 aa11.08□□□□□ -0.63
MTHFD1-210ENST00000555252 SH3BP1Q9Y3L3 701 aa11.08□□□□□ -0.63
MTHFD1-210ENST00000555252 A0A088AWK7 358 aa11.08□□□□□ -0.64
MTHFD1-210ENST00000555252 ACKR2O00590 384 aa11.08□□□□□ -0.64
MTHFD1-210ENST00000555252 DENRO43583 198 aaKnown RBP11.08□□□□□ -0.64
MTHFD1-210ENST00000555252 COQ9O75208 318 aa11.08□□□□□ -0.64
MTHFD1-210ENST00000555252 SNNO75324 88 aaPredicted RBP11.08□□□□□ -0.64
MTHFD1-210ENST00000555252 KRT37O76014 449 aa11.08□□□□□ -0.64
MTHFD1-210ENST00000555252 KRT7P08729 469 aa11.08□□□□□ -0.64
MTHFD1-210ENST00000555252 FAM200BP0CF97 657 aa11.08□□□□□ -0.64
MTHFD1-210ENST00000555252 VCLP18206 1134 aa11.08□□□□□ -0.64
MTHFD1-210ENST00000555252 PROZP22891 400 aa11.08□□□□□ -0.64
MTHFD1-210ENST00000555252 ACAT1P24752 427 aaKnown RBP11.08□□□□□ -0.64
MTHFD1-210ENST00000555252 GJC1P36383 396 aa11.08□□□□□ -0.64
MTHFD1-210ENST00000555252 TNFSF9P41273 254 aa11.08□□□□□ -0.64
MTHFD1-210ENST00000555252 RPL7AP62424 266 aaKnown RBP11.08□□□□□ -0.64
MTHFD1-210ENST00000555252 SULT2A1Q06520 285 aa11.08□□□□□ -0.64
MTHFD1-210ENST00000555252 HADHQ16836 314 aaKnown RBP11.08□□□□□ -0.64
MTHFD1-210ENST00000555252 ZNF699Q32M78 642 aa11.08□□□□□ -0.64
MTHFD1-210ENST00000555252 HP1BP3Q5SSJ5 553 aaPredicted RBP11.08□□□□□ -0.64
MTHFD1-210ENST00000555252 ARMC3Q5W041 872 aa11.08□□□□□ -0.64
MTHFD1-210ENST00000555252 GPAT2Q6NUI2 795 aa11.08□□□□□ -0.64
MTHFD1-210ENST00000555252 BORAQ6PGQ7 559 aa11.08□□□□□ -0.64
MTHFD1-210ENST00000555252 RAPH1Q70E73 1250 aa11.08□□□□□ -0.64
MTHFD1-210ENST00000555252 SLC26A11Q86WA9 606 aa11.08□□□□□ -0.64
MTHFD1-210ENST00000555252 FNIP1Q8TF40 1166 aa11.08□□□□□ -0.64
MTHFD1-210ENST00000555252 MRRFQ96E11 262 aaKnown RBP11.08□□□□□ -0.64
MTHFD1-210ENST00000555252 SERAC1Q96JX3 654 aa11.08□□□□□ -0.64
MTHFD1-210ENST00000555252 MCEEQ96PE7 176 aa11.08□□□□□ -0.64
MTHFD1-210ENST00000555252 PLEKHG4BQ96PX9 1271 aa11.08□□□□□ -0.64
MTHFD1-210ENST00000555252 SRPK1Q96SB4 655 aaKnown RBP11.08□□□□□ -0.64
MTHFD1-210ENST00000555252 TMEM121Q9BTD3 319 aa11.08□□□□□ -0.64
MTHFD1-210ENST00000555252 ZCWPW1Q9H0M4 648 aa11.08□□□□□ -0.64
MTHFD1-210ENST00000555252 FZD1Q9UP38 647 aa11.08□□□□□ -0.64
MTHFD1-210ENST00000555252 CSADQ9Y600 493 aa11.08□□□□□ -0.64
MTHFD1-210ENST00000555252 SDR42E2A6NKP2 422 aa11.07□□□□□ -0.64
MTHFD1-210ENST00000555252 TTLL13PA6NNM8 815 aa11.07□□□□□ -0.64
MTHFD1-210ENST00000555252 GOLGA8RI6L899 631 aa11.07□□□□□ -0.64
MTHFD1-210ENST00000555252 TRDMT1O14717 391 aaKnown RBP11.07□□□□□ -0.64
MTHFD1-210ENST00000555252 SNRPAP09012 282 aaKnown RBP11.07□□□□□ -0.64
MTHFD1-210ENST00000555252 PDK3Q15120 406 aa11.07□□□□□ -0.64
MTHFD1-210ENST00000555252 ADRM1Q16186 407 aa11.07□□□□□ -0.64
MTHFD1-210ENST00000555252 TAZQ16635 292 aa11.07□□□□□ -0.64
MTHFD1-210ENST00000555252 SEZ6Q53EL9 994 aa11.07□□□□□ -0.64
MTHFD1-210ENST00000555252 TEX44Q53QW1 395 aa11.07□□□□□ -0.64
MTHFD1-210ENST00000555252 TREML2Q5T2D2 321 aa11.07□□□□□ -0.64
MTHFD1-210ENST00000555252 STXBP5Q5T5C0 1151 aa11.07□□□□□ -0.64
MTHFD1-210ENST00000555252 PGM2L1Q6PCE3 622 aa11.07□□□□□ -0.64
MTHFD1-210ENST00000555252 UGT2A3Q6UWM9 527 aa11.07□□□□□ -0.64
MTHFD1-210ENST00000555252 BBS12Q6ZW61 710 aa11.07□□□□□ -0.64
MTHFD1-210ENST00000555252 THNSL1Q8IYQ7 743 aa11.07□□□□□ -0.64
MTHFD1-210ENST00000555252 GPC2Q8N158 579 aa11.07□□□□□ -0.64
MTHFD1-210ENST00000555252 RNF149Q8NC42 400 aa11.07□□□□□ -0.64
MTHFD1-210ENST00000555252 PRICKLE1Q96MT3 831 aaPredicted RBP11.07□□□□□ -0.64
MTHFD1-210ENST00000555252 GPR20Q99678 358 aa11.07□□□□□ -0.64
MTHFD1-210ENST00000555252 WDR83Q9BRX9 315 aaKnown RBP11.07□□□□□ -0.64
MTHFD1-210ENST00000555252 FZD8Q9H461 694 aa11.07□□□□□ -0.64
MTHFD1-210ENST00000555252 PADI4Q9UM07 663 aa11.07□□□□□ -0.64
MTHFD1-210ENST00000555252 IVNS1ABPQ9Y6Y0 642 aa11.07□□□□□ -0.64
MTHFD1-210ENST00000555252 ARHGAP10A1A4S6 786 aa11.07□□□□□ -0.64
MTHFD1-210ENST00000555252 NOP56O00567 594 aaKnown RBP11.07□□□□□ -0.64
MTHFD1-210ENST00000555252 IFNB1P01574 187 aa11.07□□□□□ -0.64
MTHFD1-210ENST00000555252 HOXC6P09630 235 aa11.07□□□□□ -0.64
MTHFD1-210ENST00000555252 SRGAP2CP0DJJ0 459 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms