RNA–Protein interactions for RNA: ENST00000555114.5

NEDD1-207, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 731 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-207ENST00000555114 PLEKHO2Q8TD55 490 aa16.33■□□□□ 0.2
NEDD1-207ENST00000555114 TMEM174Q8WUU8 243 aa16.33■□□□□ 0.2
NEDD1-207ENST00000555114 CDK5RAP1Q96SZ6 601 aaKnown RBP16.33■□□□□ 0.2
NEDD1-207ENST00000555114 PNPLA8Q9NP80 782 aa16.33■□□□□ 0.2
NEDD1-207ENST00000555114 DNMT3LQ9UJW3 386 aa16.33■□□□□ 0.2
NEDD1-207ENST00000555114 ZNF510Q9Y2H8 683 aa16.33■□□□□ 0.2
NEDD1-207ENST00000555114 CFAP47Q6ZTR5 3102 aa16.33■□□□□ 0.2
NEDD1-207ENST00000555114 TNRC6BQ9UPQ9 1833 aaKnown RBP16.33■□□□□ 0.2
NEDD1-207ENST00000555114 MYO18AQ92614 2054 aaKnown RBP16.33■□□□□ 0.2
NEDD1-207ENST00000555114 IKBKBO14920 756 aa16.32■□□□□ 0.2
NEDD1-207ENST00000555114 NPC1O15118 1278 aa16.32■□□□□ 0.2
NEDD1-207ENST00000555114 TRIM24O15164 1050 aa16.32■□□□□ 0.2
NEDD1-207ENST00000555114 BEST1O76090 585 aa16.32■□□□□ 0.2
NEDD1-207ENST00000555114 KIF20AO95235 890 aa16.32■□□□□ 0.2
NEDD1-207ENST00000555114 TBX18O95935 607 aa16.32■□□□□ 0.2
NEDD1-207ENST00000555114 RALAP11233 206 aa16.32■□□□□ 0.2
NEDD1-207ENST00000555114 PI4KAP42356 2102 aa16.32■□□□□ 0.2
NEDD1-207ENST00000555114 PSEN1P49768 467 aa16.32■□□□□ 0.2
NEDD1-207ENST00000555114 SLC14A1Q13336 389 aa16.32■□□□□ 0.2
NEDD1-207ENST00000555114 ORC1Q13415 861 aa16.32■□□□□ 0.2
NEDD1-207ENST00000555114 PLEKHG6Q3KR16 790 aa16.32■□□□□ 0.2
NEDD1-207ENST00000555114 GON4LQ3T8J9 2241 aa16.32■□□□□ 0.2
NEDD1-207ENST00000555114 KIAA1324Q6UXG2 1013 aaKnown RBP16.32■□□□□ 0.2
NEDD1-207ENST00000555114 MIB1Q86YT6 1006 aa16.32■□□□□ 0.2
NEDD1-207ENST00000555114 CCDC150Q8NCX0 1101 aa16.32■□□□□ 0.2
NEDD1-207ENST00000555114 TMC2Q8TDI7 906 aa16.32■□□□□ 0.2
NEDD1-207ENST00000555114 WBP2Q969T9 261 aa16.32■□□□□ 0.2
NEDD1-207ENST00000555114 HNRNPABQ99729 332 aaKnown RBP16.32■□□□□ 0.2
NEDD1-207ENST00000555114 FSCN3Q9NQT6 498 aa16.32■□□□□ 0.2
NEDD1-207ENST00000555114 DNAAF2Q9NVR5 837 aaKnown RBP16.32■□□□□ 0.2
NEDD1-207ENST00000555114 DMAC2Q9NW81 257 aa16.32■□□□□ 0.2
NEDD1-207ENST00000555114 RALYQ9UKM9 306 aaKnown RBP16.32■□□□□ 0.2
NEDD1-207ENST00000555114 PCDHB9Q9Y5E1 797 aa16.32■□□□□ 0.2
NEDD1-207ENST00000555114 PDXKO00764 312 aa16.31■□□□□ 0.2
NEDD1-207ENST00000555114 CYP26A1O43174 497 aa16.31■□□□□ 0.2
NEDD1-207ENST00000555114 CALUO43852 315 aaPredicted RBP16.31■□□□□ 0.2
NEDD1-207ENST00000555114 GREM1O60565 184 aa16.31■□□□□ 0.2
NEDD1-207ENST00000555114 ASS1P00966 412 aaKnown RBP16.31■□□□□ 0.2
NEDD1-207ENST00000555114 NR3C1P04150 777 aa16.31■□□□□ 0.2
NEDD1-207ENST00000555114 RARGP13631 454 aa16.31■□□□□ 0.2
NEDD1-207ENST00000555114 ACO1P21399 889 aaKnown RBP16.31■□□□□ 0.2
NEDD1-207ENST00000555114 ASPAP45381 313 aa16.31■□□□□ 0.2
NEDD1-207ENST00000555114 ZNF132P52740 706 aa16.31■□□□□ 0.2
NEDD1-207ENST00000555114 C10orf120Q5SQS8 335 aa16.31■□□□□ 0.2
NEDD1-207ENST00000555114 RESP18Q5W5W9 173 aa16.31■□□□□ 0.2
NEDD1-207ENST00000555114 CEP135Q66GS9 1140 aa16.31■□□□□ 0.2
NEDD1-207ENST00000555114 ATL3Q6DD88 541 aa16.31■□□□□ 0.2
NEDD1-207ENST00000555114 CLEC20AQ6ZU45 233 aa16.31■□□□□ 0.2
NEDD1-207ENST00000555114 SV2AQ7L0J3 742 aa16.31■□□□□ 0.2
NEDD1-207ENST00000555114 SLC41A1Q8IVJ1 513 aa16.31■□□□□ 0.2
NEDD1-207ENST00000555114 C12orf29Q8N999 325 aa16.31■□□□□ 0.2
NEDD1-207ENST00000555114 UCMAQ8WVF2 138 aa16.31■□□□□ 0.2
NEDD1-207ENST00000555114 JAKMIP2Q96AA8 810 aa16.31■□□□□ 0.2
NEDD1-207ENST00000555114 CYFIP2Q96F07 1278 aa16.31■□□□□ 0.2
NEDD1-207ENST00000555114 ZNF419Q96HQ0 510 aaPredicted RBP16.31■□□□□ 0.2
NEDD1-207ENST00000555114 ACOX2Q99424 681 aa16.31■□□□□ 0.2
NEDD1-207ENST00000555114 NT5C1AQ9BXI3 368 aa16.31■□□□□ 0.2
NEDD1-207ENST00000555114 BACH2Q9BYV9 841 aa16.31■□□□□ 0.2
NEDD1-207ENST00000555114 ZDHHC5Q9C0B5 715 aa16.31■□□□□ 0.2
NEDD1-207ENST00000555114 CYP3A43Q9HB55 503 aa16.31■□□□□ 0.2
NEDD1-207ENST00000555114 CACNA2D2Q9NY47 1150 aa16.31■□□□□ 0.2
NEDD1-207ENST00000555114 HMGXB4Q9UGU5 601 aa16.31■□□□□ 0.2
NEDD1-207ENST00000555114 NAGPAQ9UK23 515 aa16.31■□□□□ 0.2
NEDD1-207ENST00000555114 CFAP45Q9UL16 551 aa16.31■□□□□ 0.2
NEDD1-207ENST00000555114 HCN2Q9UL51 889 aa16.31■□□□□ 0.2
NEDD1-207ENST00000555114 PCDHA7Q9UN72 937 aa16.31■□□□□ 0.2
NEDD1-207ENST00000555114 RAD54BQ9Y620 910 aa16.31■□□□□ 0.2
NEDD1-207ENST00000555114 SRRM3A6NNA2 597 aaPredicted RBP16.3■□□□□ 0.2
NEDD1-207ENST00000555114 MEI4A8MW99 385 aa16.3■□□□□ 0.2
NEDD1-207ENST00000555114 PRRT4C9JH25 899 aa16.3■□□□□ 0.2
NEDD1-207ENST00000555114 SLFN14P0C7P3 912 aa16.3■□□□□ 0.2
NEDD1-207ENST00000555114 CD6P30203 668 aa16.3■□□□□ 0.2
NEDD1-207ENST00000555114 CHKAP35790 457 aa16.3■□□□□ 0.2
NEDD1-207ENST00000555114 DLG4P78352 724 aa16.3■□□□□ 0.2
NEDD1-207ENST00000555114 INCA1Q0VD86 236 aa16.3■□□□□ 0.2
NEDD1-207ENST00000555114 STK4Q13043 487 aa16.3■□□□□ 0.2
NEDD1-207ENST00000555114 FOXD4L5Q5VV16 416 aaPredicted RBP16.3■□□□□ 0.2
NEDD1-207ENST00000555114 TOGARAM2Q6ZUX3 1019 aa16.3■□□□□ 0.2
NEDD1-207ENST00000555114 FOXD4L4Q8WXT5 416 aaPredicted RBP16.3■□□□□ 0.2
NEDD1-207ENST00000555114 ELMO3Q96BJ8 720 aa16.3■□□□□ 0.2
NEDD1-207ENST00000555114 MRGPRX1Q96LB2 322 aa16.3■□□□□ 0.2
NEDD1-207ENST00000555114 DCLK3Q9C098 648 aa16.3■□□□□ 0.2
NEDD1-207ENST00000555114 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.3■□□□□ 0.2
NEDD1-207ENST00000555114 KLK13Q9UKR3 277 aa16.3■□□□□ 0.2
NEDD1-207ENST00000555114 A0A1W2PQH9 124 aa16.29■□□□□ 0.2
NEDD1-207ENST00000555114 PCNX2A6NKB5 2137 aa16.29■□□□□ 0.2
NEDD1-207ENST00000555114 SYNCRIPO60506 623 aaKnown RBP16.29■□□□□ 0.2
NEDD1-207ENST00000555114 HLA-DRAP01903 254 aa16.29■□□□□ 0.2
NEDD1-207ENST00000555114 CYBBP04839 570 aa16.29■□□□□ 0.2
NEDD1-207ENST00000555114 MYL1P05976 194 aa16.29■□□□□ 0.2
NEDD1-207ENST00000555114 HSP90AA1P07900 732 aaKnown RBP16.29■□□□□ 0.2
NEDD1-207ENST00000555114 PGFP49763 221 aa16.29■□□□□ 0.2
NEDD1-207ENST00000555114 COG7P83436 770 aa16.29■□□□□ 0.2
NEDD1-207ENST00000555114 FOXD4L6Q3SYB3 417 aaPredicted RBP16.29■□□□□ 0.2
NEDD1-207ENST00000555114 SPOPLQ6IQ16 392 aa16.29■□□□□ 0.2
NEDD1-207ENST00000555114 FOXD4L3Q6VB84 417 aaPredicted RBP16.29■□□□□ 0.2
NEDD1-207ENST00000555114 Q6ZNB5 142 aa16.29■□□□□ 0.2
NEDD1-207ENST00000555114 GPRIN1Q7Z2K8 1008 aa16.29■□□□□ 0.2
NEDD1-207ENST00000555114 METTL3Q86U44 580 aaKnown RBP16.29■□□□□ 0.2
NEDD1-207ENST00000555114 ZNF276Q8N554 614 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms