RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 RFFLQ8WZ73 363 aa17.18■□□□□ 0.34
SPTLC2-203ENST00000554901 EDEM1Q92611 657 aa17.18■□□□□ 0.34
SPTLC2-203ENST00000554901 NT5C3BQ969T7 300 aa17.18■□□□□ 0.34
SPTLC2-203ENST00000554901 ACSF2Q96CM8 615 aaPredicted RBP17.18■□□□□ 0.34
SPTLC2-203ENST00000554901 CALR3Q96L12 384 aaKnown RBP17.18■□□□□ 0.34
SPTLC2-203ENST00000554901 DDX23Q9BUQ8 820 aaKnown RBP17.18■□□□□ 0.34
SPTLC2-203ENST00000554901 PACSIN1Q9BY11 444 aa17.18■□□□□ 0.34
SPTLC2-203ENST00000554901 NACA2Q9H009 215 aa17.18■□□□□ 0.34
SPTLC2-203ENST00000554901 SMOC2Q9H3U7 446 aa17.18■□□□□ 0.34
SPTLC2-203ENST00000554901 TRPV4Q9HBA0 871 aa17.18■□□□□ 0.34
SPTLC2-203ENST00000554901 TRPC7Q9HCX4 862 aa17.18■□□□□ 0.34
SPTLC2-203ENST00000554901 NR2E1Q9Y466 385 aa17.18■□□□□ 0.34
SPTLC2-203ENST00000554901 DENND4AQ7Z401 1863 aa17.18■□□□□ 0.34
SPTLC2-203ENST00000554901 OBSL1O75147 1896 aa17.18■□□□□ 0.34
SPTLC2-203ENST00000554901 A0A0A6YYK5 440 aaPredicted RBP17.17■□□□□ 0.34
SPTLC2-203ENST00000554901 C2CD4BA6NLJ0 364 aa17.17■□□□□ 0.34
SPTLC2-203ENST00000554901 NRG2O14511 850 aaPredicted RBP17.17■□□□□ 0.34
SPTLC2-203ENST00000554901 GRAP2O75791 330 aa17.17■□□□□ 0.34
SPTLC2-203ENST00000554901 CKMP06732 381 aa17.17■□□□□ 0.34
SPTLC2-203ENST00000554901 RFC1P35251 1148 aaPredicted RBP17.17■□□□□ 0.34
SPTLC2-203ENST00000554901 PTPN9P43378 593 aa17.17■□□□□ 0.34
SPTLC2-203ENST00000554901 VAV2P52735 878 aa17.17■□□□□ 0.34
SPTLC2-203ENST00000554901 SLC25A52Q3SY17 297 aa17.17■□□□□ 0.34
SPTLC2-203ENST00000554901 STXBP5Q5T5C0 1151 aa17.17■□□□□ 0.34
SPTLC2-203ENST00000554901 KIAA1958Q8N8K9 716 aa17.17■□□□□ 0.34
SPTLC2-203ENST00000554901 ING5Q8WYH8 240 aa17.17■□□□□ 0.34
SPTLC2-203ENST00000554901 SMARCD2Q92925 531 aa17.17■□□□□ 0.34
SPTLC2-203ENST00000554901 E2F7Q96AV8 911 aa17.17■□□□□ 0.34
SPTLC2-203ENST00000554901 PGAP3Q96FM1 320 aaPredicted RBP17.17■□□□□ 0.34
SPTLC2-203ENST00000554901 SERPINB11Q96P15 392 aa17.17■□□□□ 0.34
SPTLC2-203ENST00000554901 MCEEQ96PE7 176 aa17.17■□□□□ 0.34
SPTLC2-203ENST00000554901 KIF9Q9HAQ2 790 aa17.17■□□□□ 0.34
SPTLC2-203ENST00000554901 EPS15L1Q9UBC2 864 aa17.17■□□□□ 0.34
SPTLC2-203ENST00000554901 MYO1AQ9UBC5 1043 aa17.17■□□□□ 0.34
SPTLC2-203ENST00000554901 ARHGAP26Q9UNA1 814 aa17.17■□□□□ 0.34
SPTLC2-203ENST00000554901 NAALADL1Q9UQQ1 740 aa17.17■□□□□ 0.34
SPTLC2-203ENST00000554901 REXO2Q9Y3B8 237 aaKnown RBP17.17■□□□□ 0.34
SPTLC2-203ENST00000554901 ADGRG1Q9Y653 693 aa17.17■□□□□ 0.34
SPTLC2-203ENST00000554901 DENND4CQ5VZ89 1909 aa17.17■□□□□ 0.34
SPTLC2-203ENST00000554901 ANAPC1Q9H1A4 1944 aa17.17■□□□□ 0.34
SPTLC2-203ENST00000554901 TMEM191CA6NGB0 347 aa17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 BTNL10A8MVZ5 291 aa17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 DPYSL4O14531 572 aa17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 PJA2O43164 708 aa17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 ATMINO43313 823 aaPredicted RBP17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 MTA2O94776 668 aa17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 F9P00740 461 aa17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 LAMP2P13473 410 aa17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 TCF3P15923 654 aa17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 PDGFRAP16234 1089 aa17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 SDC4P31431 198 aa17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 FLT3P36888 993 aa17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 ZNF143P52747 638 aaPredicted RBP17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 RNASE9P60153 205 aaKnown RBP17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 COG7P83436 770 aa17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 SYPL2Q5VXT5 272 aa17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 PHLDB2Q86SQ0 1253 aa17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 DDX42Q86XP3 938 aaKnown RBP eCLIP17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 PLCD3Q8N3E9 789 aa17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 ARL14EPQ8N8R7 260 aaPredicted RBP17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 ACRBPQ8NEB7 543 aa17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 ZSCAN18Q8TBC5 510 aaPredicted RBP17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 DQX1Q8TE96 717 aaKnown RBP17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 ATXN2LQ8WWM7 1075 aaKnown RBP17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 ARHGEF26Q96DR7 871 aa17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 ASB16Q96NS5 453 aa17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 MYADMQ96S97 322 aa17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 NPY6RQ99463 290 aa17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 NUP85Q9BW27 656 aa17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 RNF38Q9H0F5 515 aa17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 OBP2AQ9NY56 170 aa17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 MARCH2Q9P0N8 246 aa17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 HBS1LQ9Y450 684 aaKnown RBP17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 IGLV3-25P01717 112 aa17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 CCDC175P0C221 793 aa17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 MBL2P11226 248 aaPredicted RBP17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 GPD1P21695 349 aa17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 GBP1P32455 592 aa17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 GBP2P32456 591 aaPredicted RBP17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 HADHBP55084 474 aaKnown RBP17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 RPL7AP62424 266 aaKnown RBP17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 TFF2Q03403 129 aa17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 EFEMP1Q12805 493 aa17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 ACAP1Q15027 740 aa17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 KIAA1328Q86T90 577 aa17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 ARID3BQ8IVW6 561 aaPredicted RBP17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 JOSD2Q8TAC2 188 aa17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 RXFP2Q8WXD0 754 aa17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 ZSWIM3Q96MP5 696 aa17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 SLC22A12Q96S37 553 aa17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 NCAPGQ9BPX3 1015 aa17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 CNPY3Q9BT09 278 aa17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 KCNF1Q9H3M0 494 aa17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 TDP1Q9NUW8 608 aa17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 CTTNBP2NLQ9P2B4 639 aa17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 PRKAG3Q9UGI9 489 aa17.16■□□□□ 0.34
SPTLC2-203ENST00000554901 EYSQ5T1H1 3165 aa17.15■□□□□ 0.34
SPTLC2-203ENST00000554901 ENDOD1O94919 500 aa17.15■□□□□ 0.34
SPTLC2-203ENST00000554901 TRUB2O95900 331 aaKnown RBP17.15■□□□□ 0.34
SPTLC2-203ENST00000554901 TBX18O95935 607 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms