RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 ARHGAP23Q9P227 1491 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 NUP188Q5SRE5 1749 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 TET3O43151 1660 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 PTPN23Q9H3S7 1636 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 A0A0B4J269 797 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 WDR27A2RRH5 827 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 LINC00473A8K010 186 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 CLCA1A8K7I4 914 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 H7C4K7 107 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 IFRD1O00458 451 aaPredicted RBP1.81□□□□□ -2.12
PRPF39-208ENST00000554785 IKBKBO14920 756 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 ADAMTS3O15072 1205 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 CCP110O43303 1012 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 PROM1O43490 865 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 PEX1O43933 1283 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 A1BGP04217 495 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 CHRM2P08172 466 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 SRGNP10124 158 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 MYL4P12829 197 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 TPH1P17752 444 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 EEF1GP26641 437 aaKnown RBP1.81□□□□□ -2.12
PRPF39-208ENST00000554785 CD6P30203 668 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 NPTX2P47972 431 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 HSPA7P48741 367 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 NDUFV1P49821 464 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 CPT1AP50416 773 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 NHLH1Q02575 133 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 TUBB3Q13509 450 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 IDI1Q13907 227 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 ARHGEF7Q14155 803 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 KRT72Q14CN4 511 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 NPY5RQ15761 445 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 MPEG1Q2M385 716 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 FAM83BQ5T0W9 1011 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 GORABQ5T7V8 394 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 PAPD7Q5XG87 772 aaKnown RBP1.81□□□□□ -2.12
PRPF39-208ENST00000554785 SFRP4Q6FHJ7 346 aaPredicted RBP1.81□□□□□ -2.12
PRPF39-208ENST00000554785 KRT27Q7Z3Y8 459 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 SMC5Q8IY18 1101 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 EXOC8Q8IYI6 725 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP1.81□□□□□ -2.12
PRPF39-208ENST00000554785 VGLL2Q8N8G2 317 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 FANCBQ8NB91 859 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 CCDC150Q8NCX0 1101 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 TOR1AIP2Q8NFQ8 470 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 SMCR8Q8TEV9 937 aaPredicted RBP1.81□□□□□ -2.12
PRPF39-208ENST00000554785 POF1BQ8WVV4 589 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 SNX19Q92543 992 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 DPF1Q92782 380 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 PPP2R3CQ969Q6 453 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 LRRC59Q96AG4 307 aaKnown RBP1.81□□□□□ -2.12
PRPF39-208ENST00000554785 LRRC46Q96FV0 321 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 TMEM41AQ96HV5 264 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 FBXL20Q96IG2 436 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 OSBPL9Q96SU4 736 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 NELL2Q99435 816 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 POLR3GLQ9BT43 218 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 CRB3Q9BUF7 120 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 PTDSS2Q9BVG9 487 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 EIF2AQ9BY44 585 aaKnown RBP1.81□□□□□ -2.12
PRPF39-208ENST00000554785 MAGEB5Q9BZ81 275 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 WDR12Q9GZL7 423 aaKnown RBP1.81□□□□□ -2.12
PRPF39-208ENST00000554785 INTS13Q9NVM9 706 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 CDC23Q9UJX2 597 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 MAN2B2Q9Y2E5 1009 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 ADGRB3O60242 1522 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 TRPM2O94759 1503 aa1.81□□□□□ -2.12
PRPF39-208ENST00000554785 PLEKHH2Q8IVE3 1493 aa1.8□□□□□ -2.12
PRPF39-208ENST00000554785 ATRNO75882 1429 aa1.8□□□□□ -2.12
PRPF39-208ENST00000554785 MST1RQ04912 1400 aa1.8□□□□□ -2.12
PRPF39-208ENST00000554785 USP32Q8NFA0 1604 aa1.8□□□□□ -2.12
PRPF39-208ENST00000554785 AOX1Q06278 1338 aa1.8□□□□□ -2.12
PRPF39-208ENST00000554785 hCG_1984214I3L0E3 225 aa1.8□□□□□ -2.12
PRPF39-208ENST00000554785 HNRNPDLO14979 420 aaKnown RBP1.8□□□□□ -2.12
PRPF39-208ENST00000554785 MPPED1O15442 326 aa1.8□□□□□ -2.12
PRPF39-208ENST00000554785 PLA2G6O60733 806 aa1.8□□□□□ -2.12
PRPF39-208ENST00000554785 RASAL1O95294 804 aa1.8□□□□□ -2.12
PRPF39-208ENST00000554785 C1RP00736 705 aa1.8□□□□□ -2.12
PRPF39-208ENST00000554785 PDHA1P08559 390 aa1.8□□□□□ -2.12
PRPF39-208ENST00000554785 KCNA3P22001 575 aa1.8□□□□□ -2.12
PRPF39-208ENST00000554785 PPIFP30405 207 aaKnown RBP1.8□□□□□ -2.12
PRPF39-208ENST00000554785 IL6STP40189 918 aaPredicted RBP1.8□□□□□ -2.12
PRPF39-208ENST00000554785 PTDSS1P48651 473 aaKnown RBP1.8□□□□□ -2.12
PRPF39-208ENST00000554785 DGKEP52429 567 aa1.8□□□□□ -2.12
PRPF39-208ENST00000554785 TNFAIP2Q03169 654 aa1.8□□□□□ -2.12
PRPF39-208ENST00000554785 MYO1EQ12965 1108 aa1.8□□□□□ -2.12
PRPF39-208ENST00000554785 GRM1Q13255 1194 aa1.8□□□□□ -2.12
PRPF39-208ENST00000554785 E2F2Q14209 437 aa1.8□□□□□ -2.12
PRPF39-208ENST00000554785 STARD3Q14849 445 aa1.8□□□□□ -2.12
PRPF39-208ENST00000554785 TXNRD1Q16881 649 aa1.8□□□□□ -2.12
PRPF39-208ENST00000554785 GRAMD1BQ3KR37 738 aa1.8□□□□□ -2.12
PRPF39-208ENST00000554785 ZIK1Q3SY52 487 aaPredicted RBP1.8□□□□□ -2.12
PRPF39-208ENST00000554785 RBM20Q5T481 1227 aaKnown RBP1.8□□□□□ -2.12
PRPF39-208ENST00000554785 TSTD2Q5T7W7 516 aa1.8□□□□□ -2.12
PRPF39-208ENST00000554785 ARHGAP40Q5TG30 622 aa1.8□□□□□ -2.12
PRPF39-208ENST00000554785 VPS53Q5VIR6 699 aa1.8□□□□□ -2.12
PRPF39-208ENST00000554785 ICE2Q659A1 982 aa1.8□□□□□ -2.12
PRPF39-208ENST00000554785 PLAG1Q6DJT9 500 aa1.8□□□□□ -2.12
PRPF39-208ENST00000554785 FCRL6Q6DN72 434 aa1.8□□□□□ -2.12
PRPF39-208ENST00000554785 RGS7BPQ6MZT1 257 aaPredicted RBP1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms