RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 TLR10Q9BXR5 811 aa14.99□□□□□ -0.01
SHOX2-206ENST00000554685 SMOC2Q9H3U7 446 aa14.99□□□□□ -0.01
SHOX2-206ENST00000554685 FAM204AQ9H8W3 233 aa14.99□□□□□ -0.01
SHOX2-206ENST00000554685 NMUR1Q9HB89 426 aa14.99□□□□□ -0.01
SHOX2-206ENST00000554685 ASAH2Q9NR71 780 aa14.99□□□□□ -0.01
SHOX2-206ENST00000554685 DDX56Q9NY93 547 aaKnown RBP14.99□□□□□ -0.01
SHOX2-206ENST00000554685 PCDHA3Q9Y5H8 950 aa14.99□□□□□ -0.01
SHOX2-206ENST00000554685 HCFC2Q9Y5Z7 792 aa14.99□□□□□ -0.01
SHOX2-206ENST00000554685 SAR1BQ9Y6B6 198 aa14.99□□□□□ -0.01
SHOX2-206ENST00000554685 PLXNA3P51805 1871 aa14.98□□□□□ -0.01
SHOX2-206ENST00000554685 CES2O00748 559 aa14.98□□□□□ -0.01
SHOX2-206ENST00000554685 PER2O15055 1255 aa14.98□□□□□ -0.01
SHOX2-206ENST00000554685 TRUB2O95900 331 aaKnown RBP14.98□□□□□ -0.01
SHOX2-206ENST00000554685 EPCAMP16422 314 aa14.98□□□□□ -0.01
SHOX2-206ENST00000554685 CDC25CP30307 473 aa14.98□□□□□ -0.01
SHOX2-206ENST00000554685 CETN2P41208 172 aa14.98□□□□□ -0.01
SHOX2-206ENST00000554685 NRIP1P48552 1158 aa14.98□□□□□ -0.01
SHOX2-206ENST00000554685 VASPP50552 380 aaPredicted RBP14.98□□□□□ -0.01
SHOX2-206ENST00000554685 KPNA1P52294 538 aaPredicted RBP14.98□□□□□ -0.01
SHOX2-206ENST00000554685 NNTQ13423 1086 aa14.98□□□□□ -0.01
SHOX2-206ENST00000554685 CLUL1Q15846 466 aa14.98□□□□□ -0.01
SHOX2-206ENST00000554685 BOLA3Q53S33 107 aa14.98□□□□□ -0.01
SHOX2-206ENST00000554685 PRPF38BQ5VTL8 546 aaKnown RBP14.98□□□□□ -0.01
SHOX2-206ENST00000554685 SYPL2Q5VXT5 272 aa14.98□□□□□ -0.01
SHOX2-206ENST00000554685 RBM23Q86U06 439 aaKnown RBP14.98□□□□□ -0.01
SHOX2-206ENST00000554685 DQX1Q8TE96 717 aaKnown RBP14.98□□□□□ -0.01
SHOX2-206ENST00000554685 PBKQ96KB5 322 aa14.98□□□□□ -0.01
SHOX2-206ENST00000554685 CARD9Q9H257 536 aa14.98□□□□□ -0.01
SHOX2-206ENST00000554685 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.98□□□□□ -0.01
SHOX2-206ENST00000554685 DDIT4Q9NX09 232 aa14.98□□□□□ -0.01
SHOX2-206ENST00000554685 USP18Q9UMW8 372 aa14.98□□□□□ -0.01
SHOX2-206ENST00000554685 COLQQ9Y215 455 aaPredicted RBP14.98□□□□□ -0.01
SHOX2-206ENST00000554685 ZNF840PA6NDX5 716 aa14.97□□□□□ -0.01
SHOX2-206ENST00000554685 CCL16O15467 120 aa14.97□□□□□ -0.01
SHOX2-206ENST00000554685 NCK2O43639 380 aa14.97□□□□□ -0.01
SHOX2-206ENST00000554685 URI1O94763 535 aaPredicted RBP14.97□□□□□ -0.01
SHOX2-206ENST00000554685 PTPN2P17706 415 aa14.97□□□□□ -0.01
SHOX2-206ENST00000554685 PFKLP17858 780 aa14.97□□□□□ -0.01
SHOX2-206ENST00000554685 MIPP30301 263 aa14.97□□□□□ -0.01
SHOX2-206ENST00000554685 MTA1Q13330 715 aa14.97□□□□□ -0.01
SHOX2-206ENST00000554685 ARL13BQ3SXY8 428 aa14.97□□□□□ -0.01
SHOX2-206ENST00000554685 C10orf120Q5SQS8 335 aa14.97□□□□□ -0.01
SHOX2-206ENST00000554685 HECTD3Q5T447 861 aa14.97□□□□□ -0.01
SHOX2-206ENST00000554685 ZFYVE27Q5T4F4 411 aa14.97□□□□□ -0.01
SHOX2-206ENST00000554685 SEL1L2Q5TEA6 688 aa14.97□□□□□ -0.01
SHOX2-206ENST00000554685 SCYL2Q6P3W7 929 aa14.97□□□□□ -0.01
SHOX2-206ENST00000554685 KLHDC10Q6PID8 442 aa14.97□□□□□ -0.01
SHOX2-206ENST00000554685 BNIPLQ7Z465 357 aa14.97□□□□□ -0.01
SHOX2-206ENST00000554685 TAC4Q86UU9 113 aa14.97□□□□□ -0.01
SHOX2-206ENST00000554685 PSTKQ8IV42 348 aaKnown RBP14.97□□□□□ -0.01
SHOX2-206ENST00000554685 KATNAL2Q8IYT4 538 aa14.97□□□□□ -0.01
SHOX2-206ENST00000554685 CMASQ8NFW8 434 aaPredicted RBP14.97□□□□□ -0.01
SHOX2-206ENST00000554685 TEKT4Q8WW24 435 aa14.97□□□□□ -0.01
SHOX2-206ENST00000554685 MRPS31Q92665 395 aaKnown RBP14.97□□□□□ -0.01
SHOX2-206ENST00000554685 RBM41Q96IZ5 413 aaKnown RBP14.97□□□□□ -0.01
SHOX2-206ENST00000554685 NACA2Q9H009 215 aa14.97□□□□□ -0.01
SHOX2-206ENST00000554685 SFXN1Q9H9B4 322 aa14.97□□□□□ -0.01
SHOX2-206ENST00000554685 RNF14Q9UBS8 474 aa14.97□□□□□ -0.01
SHOX2-206ENST00000554685 PACSIN2Q9UNF0 486 aaPredicted RBP14.97□□□□□ -0.01
SHOX2-206ENST00000554685 COL4A4P53420 1690 aaPredicted RBP14.97□□□□□ -0.01
SHOX2-206ENST00000554685 RFXAPO00287 272 aa14.96□□□□□ -0.01
SHOX2-206ENST00000554685 KCNK3O14649 394 aa14.96□□□□□ -0.01
SHOX2-206ENST00000554685 DDX3YO15523 660 aaKnown RBP14.96□□□□□ -0.01
SHOX2-206ENST00000554685 IRAK2O43187 625 aa14.96□□□□□ -0.01
SHOX2-206ENST00000554685 TLR5O60602 858 aa14.96□□□□□ -0.01
SHOX2-206ENST00000554685 IGLV3-25P01717 112 aa14.96□□□□□ -0.01
SHOX2-206ENST00000554685 SLC2A3P11169 496 aa14.96□□□□□ -0.01
SHOX2-206ENST00000554685 PEX5P50542 639 aa14.96□□□□□ -0.01
SHOX2-206ENST00000554685 DNA2P51530 1060 aa14.96□□□□□ -0.01
SHOX2-206ENST00000554685 HDAC4P56524 1084 aa14.96□□□□□ -0.01
SHOX2-206ENST00000554685 TAS2R40P59535 323 aa14.96□□□□□ -0.01
SHOX2-206ENST00000554685 AMPD2Q01433 879 aa14.96□□□□□ -0.01
SHOX2-206ENST00000554685 SLC25A11Q02978 314 aaKnown RBP14.96□□□□□ -0.01
SHOX2-206ENST00000554685 NME3Q13232 169 aa14.96□□□□□ -0.01
SHOX2-206ENST00000554685 BRMS1LQ5PSV4 323 aa14.96□□□□□ -0.01
SHOX2-206ENST00000554685 MAP7D3Q8IWC1 876 aa14.96□□□□□ -0.01
SHOX2-206ENST00000554685 OSBPL9Q96SU4 736 aa14.96□□□□□ -0.01
SHOX2-206ENST00000554685 PRKD2Q9BZL6 878 aa14.96□□□□□ -0.01
SHOX2-206ENST00000554685 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.96□□□□□ -0.01
SHOX2-206ENST00000554685 ZMYM5Q9UJ78 669 aa14.96□□□□□ -0.01
SHOX2-206ENST00000554685 DNMT3LQ9UJW3 386 aa14.96□□□□□ -0.01
SHOX2-206ENST00000554685 MYO16Q9Y6X6 1858 aa14.95□□□□□ -0.02
SHOX2-206ENST00000554685 TNRC18O15417 2968 aaPredicted RBP14.95□□□□□ -0.02
SHOX2-206ENST00000554685 SOBPA7XYQ1 873 aa14.95□□□□□ -0.02
SHOX2-206ENST00000554685 ZNF197O14709 1029 aa14.95□□□□□ -0.02
SHOX2-206ENST00000554685 MDM4O15151 490 aa14.95□□□□□ -0.02
SHOX2-206ENST00000554685 FANCGO15287 622 aa14.95□□□□□ -0.02
SHOX2-206ENST00000554685 ZRANB2O95218 330 aaKnown RBP eCLIP14.95□□□□□ -0.02
SHOX2-206ENST00000554685 PAPLNO95428 1278 aa14.95□□□□□ -0.02
SHOX2-206ENST00000554685 F11P03951 625 aa14.95□□□□□ -0.02
SHOX2-206ENST00000554685 DDX6P26196 483 aaKnown RBP eCLIP14.95□□□□□ -0.02
SHOX2-206ENST00000554685 GABRR2P28476 465 aa14.95□□□□□ -0.02
SHOX2-206ENST00000554685 CCR1P32246 355 aa14.95□□□□□ -0.02
SHOX2-206ENST00000554685 GJC1P36383 396 aa14.95□□□□□ -0.02
SHOX2-206ENST00000554685 ATP5C1P36542 298 aaKnown RBP14.95□□□□□ -0.02
SHOX2-206ENST00000554685 CXCR3P49682 368 aa14.95□□□□□ -0.02
SHOX2-206ENST00000554685 EPHA5P54756 1037 aa14.95□□□□□ -0.02
SHOX2-206ENST00000554685 COPS2P61201 443 aa14.95□□□□□ -0.02
SHOX2-206ENST00000554685 ACBD5Q5T8D3 534 aaPredicted RBP14.95□□□□□ -0.02
SHOX2-206ENST00000554685 SH3PXD2AQ5TCZ1 1133 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms