RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 HTRA4P83105 476 aaPredicted RBP4.66□□□□□ -1.66
VTI1B-203ENST00000554636 ANKRD1Q15327 319 aa4.66□□□□□ -1.66
VTI1B-203ENST00000554636 TCEA2Q15560 299 aa4.66□□□□□ -1.66
VTI1B-203ENST00000554636 UGCGQ16739 394 aa4.66□□□□□ -1.66
VTI1B-203ENST00000554636 Q4G0T1 1027 aa4.66□□□□□ -1.66
VTI1B-203ENST00000554636 FBXO47Q5MNV8 452 aa4.66□□□□□ -1.66
VTI1B-203ENST00000554636 TTC38Q5R3I4 469 aa4.66□□□□□ -1.66
VTI1B-203ENST00000554636 FAM160B1Q5W0V3 765 aa4.66□□□□□ -1.66
VTI1B-203ENST00000554636 GALNT17Q6IS24 598 aa4.66□□□□□ -1.66
VTI1B-203ENST00000554636 MIS18BP1Q6P0N0 1132 aa4.66□□□□□ -1.66
VTI1B-203ENST00000554636 CPLX2Q6PUV4 134 aaKnown RBP4.66□□□□□ -1.66
VTI1B-203ENST00000554636 MTHFD1LQ6UB35 978 aa4.66□□□□□ -1.66
VTI1B-203ENST00000554636 B3GNT9Q6UX72 402 aa4.66□□□□□ -1.66
VTI1B-203ENST00000554636 TSHZ1Q6ZSZ6 1077 aa4.66□□□□□ -1.66
VTI1B-203ENST00000554636 SMAP1Q8IYB5 467 aaPredicted RBP4.66□□□□□ -1.66
VTI1B-203ENST00000554636 MYOCDQ8IZQ8 938 aa4.66□□□□□ -1.66
VTI1B-203ENST00000554636 BCL6BQ8N143 479 aaPredicted RBP4.66□□□□□ -1.66
VTI1B-203ENST00000554636 LINC01465Q8N7H1 131 aa4.66□□□□□ -1.66
VTI1B-203ENST00000554636 NECAB1Q8N987 351 aa4.66□□□□□ -1.66
VTI1B-203ENST00000554636 SLC17A8Q8NDX2 589 aa4.66□□□□□ -1.66
VTI1B-203ENST00000554636 NSUN7Q8NE18 718 aaKnown RBP4.66□□□□□ -1.66
VTI1B-203ENST00000554636 OR5AN1Q8NGI8 311 aa4.66□□□□□ -1.66
VTI1B-203ENST00000554636 ETNPPLQ8TBG4 499 aa4.66□□□□□ -1.66
VTI1B-203ENST00000554636 TBCKQ8TEA7 893 aa4.66□□□□□ -1.66
VTI1B-203ENST00000554636 ATP8B4Q8TF62 1192 aa4.66□□□□□ -1.66
VTI1B-203ENST00000554636 SEPT8Q92599 483 aa4.66□□□□□ -1.66
VTI1B-203ENST00000554636 APBB2Q92870 758 aa4.66□□□□□ -1.66
VTI1B-203ENST00000554636 GJA10Q969M2 543 aa4.66□□□□□ -1.66
VTI1B-203ENST00000554636 ELF4Q99607 663 aaPredicted RBP4.66□□□□□ -1.66
VTI1B-203ENST00000554636 KRTAP4-5Q9BYR2 181 aa4.66□□□□□ -1.66
VTI1B-203ENST00000554636 IFIH1Q9BYX4 1025 aaKnown RBP4.66□□□□□ -1.66
VTI1B-203ENST00000554636 C22orf23Q9BZE7 217 aa4.66□□□□□ -1.66
VTI1B-203ENST00000554636 FAM49AQ9H0Q0 323 aaPredicted RBP4.66□□□□□ -1.66
VTI1B-203ENST00000554636 VPS11Q9H270 941 aa4.66□□□□□ -1.66
VTI1B-203ENST00000554636 UNC45AQ9H3U1 944 aa4.66□□□□□ -1.66
VTI1B-203ENST00000554636 AZI2Q9H6S1 392 aa4.66□□□□□ -1.66
VTI1B-203ENST00000554636 AGO3Q9H9G7 860 aaKnown RBP4.66□□□□□ -1.66
VTI1B-203ENST00000554636 CERS4Q9HA82 394 aa4.66□□□□□ -1.66
VTI1B-203ENST00000554636 SLC28A3Q9HAS3 691 aa4.66□□□□□ -1.66
VTI1B-203ENST00000554636 ZNF302Q9NR11 478 aa4.66□□□□□ -1.66
VTI1B-203ENST00000554636 ACSS2Q9NR19 701 aa4.66□□□□□ -1.66
VTI1B-203ENST00000554636 TBC1D22BQ9NU19 505 aa4.66□□□□□ -1.66
VTI1B-203ENST00000554636 ORC3Q9UBD5 711 aaPredicted RBP4.66□□□□□ -1.66
VTI1B-203ENST00000554636 SAE1Q9UBE0 346 aaPredicted RBP4.66□□□□□ -1.66
VTI1B-203ENST00000554636 MAGEC2Q9UBF1 373 aaPredicted RBP4.66□□□□□ -1.66
VTI1B-203ENST00000554636 RALGAPA2Q2PPJ7 1873 aa4.66□□□□□ -1.66
VTI1B-203ENST00000554636 KDM3AQ9Y4C1 1321 aa4.66□□□□□ -1.66
VTI1B-203ENST00000554636 KIAA1671Q9BY89 1806 aa4.65□□□□□ -1.66
VTI1B-203ENST00000554636 LINC01553A4QN01 128 aa4.65□□□□□ -1.67
VTI1B-203ENST00000554636 KIF28PB7ZC32 967 aa4.65□□□□□ -1.67
VTI1B-203ENST00000554636 SLC37A4O43826 429 aa4.65□□□□□ -1.67
VTI1B-203ENST00000554636 JAK2O60674 1132 aa4.65□□□□□ -1.67
VTI1B-203ENST00000554636 GAS7O60861 476 aa4.65□□□□□ -1.67
VTI1B-203ENST00000554636 PSMD10O75832 226 aa4.65□□□□□ -1.67
VTI1B-203ENST00000554636 STBD1O95210 358 aa4.65□□□□□ -1.67
VTI1B-203ENST00000554636 C22orf31O95567 290 aa4.65□□□□□ -1.67
VTI1B-203ENST00000554636 RPLP2P05387 115 aaKnown RBP4.65□□□□□ -1.67
VTI1B-203ENST00000554636 LINC00271P0C7V0 271 aa4.65□□□□□ -1.67
VTI1B-203ENST00000554636 POU3F3P20264 500 aaPredicted RBP4.65□□□□□ -1.67
VTI1B-203ENST00000554636 CD52P31358 61 aa4.65□□□□□ -1.67
VTI1B-203ENST00000554636 JAK3P52333 1124 aa4.65□□□□□ -1.67
VTI1B-203ENST00000554636 ATP2C1P98194 919 aaPredicted RBP4.65□□□□□ -1.67
VTI1B-203ENST00000554636 NFYCQ13952 458 aa4.65□□□□□ -1.67
VTI1B-203ENST00000554636 PRKD1Q15139 912 aaPredicted RBP4.65□□□□□ -1.67
VTI1B-203ENST00000554636 EARS2Q5JPH6 523 aaKnown RBP4.65□□□□□ -1.67
VTI1B-203ENST00000554636 ZNF484Q5JVG2 852 aa4.65□□□□□ -1.67
VTI1B-203ENST00000554636 LRCH2Q5VUJ6 765 aa4.65□□□□□ -1.67
VTI1B-203ENST00000554636 KRT40Q6A162 431 aa4.65□□□□□ -1.67
VTI1B-203ENST00000554636 SWSAP1Q6NVH7 229 aa4.65□□□□□ -1.67
VTI1B-203ENST00000554636 ESRP1Q6NXG1 681 aaKnown RBP4.65□□□□□ -1.67
VTI1B-203ENST00000554636 RSPH3Q86UC2 560 aa4.65□□□□□ -1.67
VTI1B-203ENST00000554636 JAZF1Q86VZ6 243 aa4.65□□□□□ -1.67
VTI1B-203ENST00000554636 GPR135Q8IZ08 494 aa4.65□□□□□ -1.67
VTI1B-203ENST00000554636 KIAA0319LQ8IZA0 1049 aa4.65□□□□□ -1.67
VTI1B-203ENST00000554636 ZNF808Q8N4W9 903 aaPredicted RBP4.65□□□□□ -1.67
VTI1B-203ENST00000554636 RDM1Q8NG50 284 aa4.65□□□□□ -1.67
VTI1B-203ENST00000554636 GDPD5Q8WTR4 605 aa4.65□□□□□ -1.67
VTI1B-203ENST00000554636 ARNTL2Q8WYA1 636 aa4.65□□□□□ -1.67
VTI1B-203ENST00000554636 TOP1MTQ969P6 601 aa4.65□□□□□ -1.67
VTI1B-203ENST00000554636 E2F7Q96AV8 911 aa4.65□□□□□ -1.67
VTI1B-203ENST00000554636 TGS1Q96RS0 853 aaKnown RBP4.65□□□□□ -1.67
VTI1B-203ENST00000554636 RIT2Q99578 217 aa4.65□□□□□ -1.67
VTI1B-203ENST00000554636 RAD9AQ99638 391 aa4.65□□□□□ -1.67
VTI1B-203ENST00000554636 TEKT3Q9BXF9 490 aa4.65□□□□□ -1.67
VTI1B-203ENST00000554636 TMX1Q9H3N1 280 aa4.65□□□□□ -1.67
VTI1B-203ENST00000554636 ERVK-5Q9HDB9 667 aa4.65□□□□□ -1.67
VTI1B-203ENST00000554636 KCNMB3Q9NPA1 279 aa4.65□□□□□ -1.67
VTI1B-203ENST00000554636 OXSMQ9NWU1 459 aa4.65□□□□□ -1.67
VTI1B-203ENST00000554636 THG1LQ9NWX6 298 aaKnown RBP4.65□□□□□ -1.67
VTI1B-203ENST00000554636 GABBR1Q9UBS5 961 aa4.65□□□□□ -1.67
VTI1B-203ENST00000554636 DDX25Q9UHL0 483 aaKnown RBP4.65□□□□□ -1.67
VTI1B-203ENST00000554636 DNAI1Q9UI46 699 aa4.65□□□□□ -1.67
VTI1B-203ENST00000554636 ZKSCAN5Q9Y2L8 839 aa4.65□□□□□ -1.67
VTI1B-203ENST00000554636 PCDHA10Q9Y5I2 948 aa4.65□□□□□ -1.67
VTI1B-203ENST00000554636 MTCH2Q9Y6C9 303 aa4.65□□□□□ -1.67
VTI1B-203ENST00000554636 SQORQ9Y6N5 450 aa4.65□□□□□ -1.67
VTI1B-203ENST00000554636 NCOR1O75376 2440 aa4.65□□□□□ -1.67
VTI1B-203ENST00000554636 SLC26A4O43511 780 aa4.64□□□□□ -1.67
VTI1B-203ENST00000554636 CHMP2AO43633 222 aa4.64□□□□□ -1.67
VTI1B-203ENST00000554636 EIF5BO60841 1220 aaKnown RBP4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms