RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 DEUP1Q05D60 604 aa5.91□□□□□ -1.46
SCFD1-211ENST00000554437 MTAPQ13126 283 aa5.91□□□□□ -1.46
SCFD1-211ENST00000554437 TMEM119Q4V9L6 283 aa5.91□□□□□ -1.46
SCFD1-211ENST00000554437 ARL6IP4Q66PJ3 421 aaKnown RBP5.91□□□□□ -1.46
SCFD1-211ENST00000554437 SERPINA13PQ6UXR4 307 aa5.91□□□□□ -1.46
SCFD1-211ENST00000554437 PRIMA1Q86XR5 153 aa5.91□□□□□ -1.46
SCFD1-211ENST00000554437 RASGRP3Q8IV61 690 aa5.91□□□□□ -1.46
SCFD1-211ENST00000554437 SNX18Q96RF0 628 aa5.91□□□□□ -1.46
SCFD1-211ENST00000554437 RPS6KC1Q96S38 1066 aa5.91□□□□□ -1.46
SCFD1-211ENST00000554437 WDR12Q9GZL7 423 aaKnown RBP5.91□□□□□ -1.46
SCFD1-211ENST00000554437 RIPOR2Q9Y4F9 1068 aa5.91□□□□□ -1.46
SCFD1-211ENST00000554437 LOC102724159A0A0B4J2E5 919 aa5.9□□□□□ -1.46
SCFD1-211ENST00000554437 F5H423 210 aaPredicted RBP5.9□□□□□ -1.46
SCFD1-211ENST00000554437 PIP5K1BO14986 540 aa5.9□□□□□ -1.46
SCFD1-211ENST00000554437 FFAR2O15552 330 aa5.9□□□□□ -1.46
SCFD1-211ENST00000554437 CA12O43570 354 aa5.9□□□□□ -1.46
SCFD1-211ENST00000554437 C1RP00736 705 aa5.9□□□□□ -1.46
SCFD1-211ENST00000554437 DRD1P21728 446 aa5.9□□□□□ -1.46
SCFD1-211ENST00000554437 RENBPP51606 427 aa5.9□□□□□ -1.46
SCFD1-211ENST00000554437 TXNL4AP83876 142 aaKnown RBP5.9□□□□□ -1.46
SCFD1-211ENST00000554437 TNFAIP2Q03169 654 aa5.9□□□□□ -1.46
SCFD1-211ENST00000554437 PWP2Q15269 919 aaKnown RBP5.9□□□□□ -1.46
SCFD1-211ENST00000554437 GRHL2Q6ISB3 625 aa5.9□□□□□ -1.46
SCFD1-211ENST00000554437 PGBD2Q6P3X8 592 aa5.9□□□□□ -1.46
SCFD1-211ENST00000554437 BCDIN3DQ7Z5W3 292 aaKnown RBP5.9□□□□□ -1.46
SCFD1-211ENST00000554437 PNPLA1Q8N8W4 532 aa5.9□□□□□ -1.46
SCFD1-211ENST00000554437 ZNF527Q8NB42 609 aa5.9□□□□□ -1.46
SCFD1-211ENST00000554437 WDR24Q96S15 920 aa5.9□□□□□ -1.46
SCFD1-211ENST00000554437 CRB3Q9BUF7 120 aa5.9□□□□□ -1.46
SCFD1-211ENST00000554437 MYH16Q9H6N6 1097 aa5.9□□□□□ -1.46
SCFD1-211ENST00000554437 USP29Q9HBJ7 922 aa5.9□□□□□ -1.46
SCFD1-211ENST00000554437 A0A087WV62 115 aa5.89□□□□□ -1.47
SCFD1-211ENST00000554437 OR2W5A6NFC9 320 aa5.89□□□□□ -1.47
SCFD1-211ENST00000554437 H7C1Q1 480 aa5.89□□□□□ -1.47
SCFD1-211ENST00000554437 GCATO75600 419 aa5.89□□□□□ -1.47
SCFD1-211ENST00000554437 ZNF37AP17032 561 aaPredicted RBP5.89□□□□□ -1.47
SCFD1-211ENST00000554437 DGKQP52824 942 aa5.89□□□□□ -1.47
SCFD1-211ENST00000554437 CHAF1AQ13111 956 aaPredicted RBP5.89□□□□□ -1.47
SCFD1-211ENST00000554437 P3H1Q32P28 736 aa5.89□□□□□ -1.47
SCFD1-211ENST00000554437 TMEM196Q5HYL7 178 aa5.89□□□□□ -1.47
SCFD1-211ENST00000554437 ZNF788Q6ZQV5 615 aa5.89□□□□□ -1.47
SCFD1-211ENST00000554437 TTC30AQ86WT1 665 aa5.89□□□□□ -1.47
SCFD1-211ENST00000554437 MYLK4Q86YV6 388 aaPredicted RBP5.89□□□□□ -1.47
SCFD1-211ENST00000554437 FAM71DQ8N9W8 422 aa5.89□□□□□ -1.47
SCFD1-211ENST00000554437 IGSF9Q9P2J2 1179 aa5.89□□□□□ -1.47
SCFD1-211ENST00000554437 CA14Q9ULX7 337 aa5.89□□□□□ -1.47
SCFD1-211ENST00000554437 DTNAQ9Y4J8 743 aa5.89□□□□□ -1.47
SCFD1-211ENST00000554437 AOX1Q06278 1338 aa5.89□□□□□ -1.47
SCFD1-211ENST00000554437 FNDC1Q4ZHG4 1894 aaPredicted RBP5.89□□□□□ -1.47
SCFD1-211ENST00000554437 GOLGA6L3A6NEY3 463 aa5.88□□□□□ -1.47
SCFD1-211ENST00000554437 J3KTA2 159 aa5.88□□□□□ -1.47
SCFD1-211ENST00000554437 CBFA2T3O75081 653 aa5.88□□□□□ -1.47
SCFD1-211ENST00000554437 MT-CO3P00414 261 aa5.88□□□□□ -1.47
SCFD1-211ENST00000554437 NHLRC4P0CG21 123 aaPredicted RBP5.88□□□□□ -1.47
SCFD1-211ENST00000554437 GSTM5P46439 218 aa5.88□□□□□ -1.47
SCFD1-211ENST00000554437 PROK1P58294 105 aa5.88□□□□□ -1.47
SCFD1-211ENST00000554437 NHLH1Q02575 133 aa5.88□□□□□ -1.47
SCFD1-211ENST00000554437 BFSP2Q13515 415 aa5.88□□□□□ -1.47
SCFD1-211ENST00000554437 AASDHQ4L235 1098 aaPredicted RBP5.88□□□□□ -1.47
SCFD1-211ENST00000554437 PRAMEF17Q5VTA0 474 aa5.88□□□□□ -1.47
SCFD1-211ENST00000554437 TLDC1Q6P9B6 456 aa5.88□□□□□ -1.47
SCFD1-211ENST00000554437 C12orf76Q8N812 135 aaPredicted RBP5.88□□□□□ -1.47
SCFD1-211ENST00000554437 PNLDC1Q8NA58 520 aaKnown RBP5.88□□□□□ -1.47
SCFD1-211ENST00000554437 HASPINQ8TF76 798 aa5.88□□□□□ -1.47
SCFD1-211ENST00000554437 POF1BQ8WVV4 589 aa5.88□□□□□ -1.47
SCFD1-211ENST00000554437 PRR11Q96HE9 360 aaPredicted RBP5.88□□□□□ -1.47
SCFD1-211ENST00000554437 CCDC17Q96LX7 622 aa5.88□□□□□ -1.47
SCFD1-211ENST00000554437 HS6ST2Q96MM7 605 aa5.88□□□□□ -1.47
SCFD1-211ENST00000554437 EIF3CQ99613 913 aaKnown RBP5.88□□□□□ -1.47
SCFD1-211ENST00000554437 PRPF18Q99633 342 aaKnown RBP5.88□□□□□ -1.47
SCFD1-211ENST00000554437 NUDT22Q9BRQ3 303 aa5.88□□□□□ -1.47
SCFD1-211ENST00000554437 CINPQ9BW66 212 aaPredicted RBP5.88□□□□□ -1.47
SCFD1-211ENST00000554437 EPS8L2Q9H6S3 715 aa5.88□□□□□ -1.47
SCFD1-211ENST00000554437 HELLSQ9NRZ9 838 aa5.88□□□□□ -1.47
SCFD1-211ENST00000554437 ASIC5Q9NY37 505 aa5.88□□□□□ -1.47
SCFD1-211ENST00000554437 PTGFRNQ9P2B2 879 aa5.88□□□□□ -1.47
SCFD1-211ENST00000554437 COMMD10Q9Y6G5 202 aa5.88□□□□□ -1.47
SCFD1-211ENST00000554437 MANSC4A6NHS7 340 aaPredicted RBP5.87□□□□□ -1.47
SCFD1-211ENST00000554437 AQP12BA6NM10 295 aa5.87□□□□□ -1.47
SCFD1-211ENST00000554437 POC1B-GALNT4F8VUJ3 575 aa5.87□□□□□ -1.47
SCFD1-211ENST00000554437 UBE2Q2LH0YL09 131 aa5.87□□□□□ -1.47
SCFD1-211ENST00000554437 TPD52L2O43399 206 aaKnown RBP5.87□□□□□ -1.47
SCFD1-211ENST00000554437 USP1O94782 785 aa5.87□□□□□ -1.47
SCFD1-211ENST00000554437 GLP2RO95838 553 aa5.87□□□□□ -1.47
SCFD1-211ENST00000554437 LDHAP00338 332 aaKnown RBP5.87□□□□□ -1.47
SCFD1-211ENST00000554437 APEHP13798 732 aaKnown RBP5.87□□□□□ -1.47
SCFD1-211ENST00000554437 TFF2Q03403 129 aa5.87□□□□□ -1.47
SCFD1-211ENST00000554437 CCDC15Q0P6D6 951 aa5.87□□□□□ -1.47
SCFD1-211ENST00000554437 DNASE1L3Q13609 305 aa5.87□□□□□ -1.47
SCFD1-211ENST00000554437 KCNJ12Q14500 433 aa5.87□□□□□ -1.47
SCFD1-211ENST00000554437 PUM3Q15397 648 aaKnown RBP5.87□□□□□ -1.47
SCFD1-211ENST00000554437 FAM187BQ17R55 369 aa5.87□□□□□ -1.47
SCFD1-211ENST00000554437 PROSER3Q2NL68 480 aa5.87□□□□□ -1.47
SCFD1-211ENST00000554437 GORABQ5T7V8 394 aa5.87□□□□□ -1.47
SCFD1-211ENST00000554437 TMEM65Q6PI78 240 aa5.87□□□□□ -1.47
SCFD1-211ENST00000554437 CHSY1Q86X52 802 aa5.87□□□□□ -1.47
SCFD1-211ENST00000554437 GALNT4Q8N4A0 578 aa5.87□□□□□ -1.47
SCFD1-211ENST00000554437 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.87□□□□□ -1.47
SCFD1-211ENST00000554437 MAFAQ8NHW3 353 aaPredicted RBP5.87□□□□□ -1.47
SCFD1-211ENST00000554437 ADAMTS18Q8TE60 1221 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms