RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 ACOX2Q99424 681 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 TMEM175Q9BSA9 504 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 TRIM5Q9C035 493 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 TASP1Q9H6P5 420 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 C17orf75Q9HAS0 396 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 DMAP1Q9NPF5 467 aaPredicted RBP2.63□□□□□ -1.99
PRPF39-205ENST00000554081 TLR8Q9NR97 1041 aaKnown RBP2.63□□□□□ -1.99
PRPF39-205ENST00000554081 RAB20Q9NX57 234 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 MTRRQ9UBK8 725 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 SLC12A6Q9UHW9 1150 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 EIF2B4Q9UI10 523 aaKnown RBP2.63□□□□□ -1.99
PRPF39-205ENST00000554081 DNAI1Q9UI46 699 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 TSR3Q9UJK0 312 aaKnown RBP2.63□□□□□ -1.99
PRPF39-205ENST00000554081 SLC25A13Q9UJS0 675 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 TSPAN16Q9UKR8 245 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 DSEQ9UL01 958 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 KIAA1217Q5T5P2 1943 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 LRRK2Q5S007 2527 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 CPED1A4D0V7 1026 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 PRR33A8MZF0 331 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 M0R2N6 131 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 SYN3O14994 580 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 TBL1XO60907 577 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 WFS1O76024 890 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 ALDH1A2O94788 518 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 KAT7O95251 611 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 IPO7O95373 1038 aaKnown RBP2.63□□□□□ -1.99
PRPF39-205ENST00000554081 NFATC1O95644 943 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 APOEP02649 317 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 HOXD8P13378 290 aaPredicted RBP2.63□□□□□ -1.99
PRPF39-205ENST00000554081 SLC9A1P19634 815 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 SCP2P22307 547 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 CMA1P23946 247 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 GNA15P30679 374 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 CORO1AP31146 461 aaKnown RBP2.63□□□□□ -1.99
PRPF39-205ENST00000554081 CTHP32929 405 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 CSNK1EP49674 416 aaKnown RBP2.63□□□□□ -1.99
PRPF39-205ENST00000554081 RPS24P62847 133 aaKnown RBP2.63□□□□□ -1.99
PRPF39-205ENST00000554081 CREMQ03060 361 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 MCL1Q07820 350 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 PPP3CAQ08209 521 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 RAB33AQ14088 237 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 DMC1Q14565 340 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 MAPRE1Q15691 268 aaKnown RBP2.63□□□□□ -1.99
PRPF39-205ENST00000554081 INTS6LQ5JSJ4 861 aaKnown RBP2.63□□□□□ -1.99
PRPF39-205ENST00000554081 NAA35Q5VZE5 725 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 SLC39A4Q6P5W5 647 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 PKN3Q6P5Z2 889 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 PDXDC1Q6P996 788 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 INTS8Q75QN2 995 aaKnown RBP2.63□□□□□ -1.99
PRPF39-205ENST00000554081 MARK2Q7KZI7 788 aaKnown RBP2.63□□□□□ -1.99
PRPF39-205ENST00000554081 CYP2U1Q7Z449 544 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 FAM35AQ86V20 835 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 TMPRSS6Q8IU80 811 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 LGI2Q8N0V4 545 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 ZCCHC9Q8N567 271 aaKnown RBP2.63□□□□□ -1.99
PRPF39-205ENST00000554081 CELF5Q8N6W0 485 aaKnown RBP2.63□□□□□ -1.99
PRPF39-205ENST00000554081 C4orf32Q8N8J7 132 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 ATP11CQ8NB49 1132 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 CCNYQ8ND76 341 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 DEFB124Q8NES8 71 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 GOLGA5Q8TBA6 731 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 PARD3BQ8TEW8 1205 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 USP33Q8TEY7 942 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 LRRN4Q8WUT4 740 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 CRYGNQ8WXF5 182 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 EXOC4Q96A65 974 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 ZBTB9Q96C00 473 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 INTS4Q96HW7 963 aaKnown RBP2.63□□□□□ -1.99
PRPF39-205ENST00000554081 CNOT6LQ96LI5 555 aaKnown RBP2.63□□□□□ -1.99
PRPF39-205ENST00000554081 UROC1Q96N76 676 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 RTP3Q9BQQ7 232 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 KRTAP9-2Q9BYQ4 174 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 IRF2BPLQ9H1B7 796 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 TMEM134Q9H6X4 195 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 SAMSN1Q9NSI8 373 aaKnown RBP2.63□□□□□ -1.99
PRPF39-205ENST00000554081 ABCB8Q9NUT2 735 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 C2orf42Q9NWW7 574 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 IRAK4Q9NWZ3 460 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 UXTQ9UBK9 157 aaPredicted RBP2.63□□□□□ -1.99
PRPF39-205ENST00000554081 SEL1LQ9UBV2 794 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 TRIM10Q9UDY6 481 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 KLHL3Q9UH77 587 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 FBXO9Q9UK97 447 aaPredicted RBP2.63□□□□□ -1.99
PRPF39-205ENST00000554081 WDR3Q9UNX4 943 aaKnown RBP eCLIP2.63□□□□□ -1.99
PRPF39-205ENST00000554081 TMA7Q9Y2S6 64 aaKnown RBP2.63□□□□□ -1.99
PRPF39-205ENST00000554081 PCDHGA4Q9Y5G9 962 aa2.63□□□□□ -1.99
PRPF39-205ENST00000554081 USP9XQ93008 2570 aaPredicted RBP2.63□□□□□ -1.99
PRPF39-205ENST00000554081 ARAP2Q8WZ64 1704 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 MYH10P35580 1976 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 MTORP42345 2549 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 SETXQ7Z333 2677 aaKnown RBP2.62□□□□□ -1.99
PRPF39-205ENST00000554081 USP34Q70CQ2 3546 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 A0A1B0GUL6 1792 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 GOLGA6L7A0A1B0GV03 622 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 SPAARA0A1B0GVQ0 90 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 BICDL2A1A5D9 508 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 CCDC78A2IDD5 438 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 LRRIQ3A6PVS8 624 aaPredicted RBP2.62□□□□□ -1.99
PRPF39-205ENST00000554081 M0QYT0 321 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms