RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 ZNF513Q8N8E2 541 aaPredicted RBP6.96□□□□□ -1.3
SLIRP-203ENST00000554074 SPATA20Q8TB22 786 aa6.96□□□□□ -1.3
SLIRP-203ENST00000554074 SEMA4DQ92854 862 aa6.96□□□□□ -1.3
SLIRP-203ENST00000554074 SPACA7Q96KW9 195 aa6.96□□□□□ -1.3
SLIRP-203ENST00000554074 TIGD1Q96MW7 591 aa6.96□□□□□ -1.3
SLIRP-203ENST00000554074 XPO6Q96QU8 1125 aaKnown RBP6.96□□□□□ -1.3
SLIRP-203ENST00000554074 LSM14BQ9BX40 385 aaKnown RBP6.96□□□□□ -1.3
SLIRP-203ENST00000554074 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.96□□□□□ -1.31e-10■■■■■ 28.7
SLIRP-203ENST00000554074 OSER1Q9NX31 292 aa6.96□□□□□ -1.3
SLIRP-203ENST00000554074 RAB20Q9NX57 234 aa6.96□□□□□ -1.3
SLIRP-203ENST00000554074 DNMT3LQ9UJW3 386 aa6.96□□□□□ -1.3
SLIRP-203ENST00000554074 ZNF510Q9Y2H8 683 aa6.96□□□□□ -1.3
SLIRP-203ENST00000554074 CABIN1Q9Y6J0 2220 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 A0A1W2PQH9 124 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 TBC1D3BA6NDS4 549 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 ANTXRLA6NF34 631 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 HAX1O00165 279 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 GFRA2O00451 464 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 DCLK1O15075 740 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 NPC1O15118 1278 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 PMM2O15305 246 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 STC2O76061 302 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 SMC2O95347 1197 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 CAVIN2O95810 425 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 TBX18O95935 607 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 IRF1P10914 325 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 RALAP11233 206 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 RARGP13631 454 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 TYRP14679 529 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 CD58P19256 250 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 NTSR1P30989 418 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 GBP1P32455 592 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 HOXD12P35452 270 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 PPP1R2P41236 205 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 PRCPP42785 496 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 RAD23BP54727 409 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 SLC8A3P57103 927 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 YWHAEP62258 255 aaKnown RBP6.95□□□□□ -1.3
SLIRP-203ENST00000554074 COG7P83436 770 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 CREB5Q02930 508 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 KDSRQ06136 332 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 E2F5Q15329 346 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 CCDC6Q16204 474 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 ANO4Q32M45 955 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 RAB41Q5JT25 222 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 C10orf76Q5T2E6 689 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 EMC10Q5UCC4 262 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 RNF43Q68DV7 783 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 GRAMD4Q6IC98 578 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 FOXR2Q6PJQ5 311 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 LPCAT2Q7L5N7 544 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 SCD5Q86SK9 330 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 ARHGAP18Q8N392 663 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 ANKRD52Q8NB46 1076 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 SLC4A11Q8NBS3 891 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 ENGASEQ8NFI3 743 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 WBP2Q969T9 261 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 TMEM176AQ96HP8 235 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 HEXIM2Q96MH2 286 aaKnown RBP6.95□□□□□ -1.3
SLIRP-203ENST00000554074 TSG101Q99816 390 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 GABRG3Q99928 467 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 BBS2Q9BXC9 721 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 TPSD1Q9BZJ3 242 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 DCLK3Q9C098 648 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 NMUR1Q9HB89 426 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 RXFP3Q9NSD7 469 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 CISHQ9NSE2 258 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 DNAJC17Q9NVM6 304 aaKnown RBP6.95□□□□□ -1.3
SLIRP-203ENST00000554074 EVLQ9UI08 416 aaPredicted RBP6.95□□□□□ -1.3
SLIRP-203ENST00000554074 HOOK1Q9UJC3 728 aaKnown RBP6.95□□□□□ -1.3
SLIRP-203ENST00000554074 NAGPAQ9UK23 515 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 FBXO10Q9UK96 956 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 SLC27A6Q9Y2P4 619 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 NUMA1Q14980 2115 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 ZFHX4Q86UP3 3567 aa6.95□□□□□ -1.3
SLIRP-203ENST00000554074 MUC22E2RYF6 1773 aaPredicted RBP6.95□□□□□ -1.3
SLIRP-203ENST00000554074 KNL1Q8NG31 2342 aa6.94□□□□□ -1.3
SLIRP-203ENST00000554074 LNP1A1A4G5 178 aa6.94□□□□□ -1.3
SLIRP-203ENST00000554074 GOLGA6L4A6NEF3 574 aa6.94□□□□□ -1.3
SLIRP-203ENST00000554074 NEDD8-MDP1E9PL57 170 aa6.94□□□□□ -1.3
SLIRP-203ENST00000554074 KHNYNO15037 678 aaKnown RBP6.94□□□□□ -1.3
SLIRP-203ENST00000554074 ZNF217O75362 1048 aa6.94□□□□□ -1.3
SLIRP-203ENST00000554074 PENKP01210 267 aaPredicted RBP6.94□□□□□ -1.3
SLIRP-203ENST00000554074 CISD3P0C7P0 127 aa6.94□□□□□ -1.3
SLIRP-203ENST00000554074 HOXB2P14652 356 aa6.94□□□□□ -1.3
SLIRP-203ENST00000554074 BCKDHBP21953 392 aa6.94□□□□□ -1.3
SLIRP-203ENST00000554074 TBXAS1P24557 533 aaPredicted RBP6.94□□□□□ -1.3
SLIRP-203ENST00000554074 CHKAP35790 457 aa6.94□□□□□ -1.3
SLIRP-203ENST00000554074 DGKGP49619 791 aa6.94□□□□□ -1.3
SLIRP-203ENST00000554074 ZNF132P52740 706 aa6.94□□□□□ -1.3
SLIRP-203ENST00000554074 BCAT1P54687 386 aa6.94□□□□□ -1.3
SLIRP-203ENST00000554074 SHC2P98077 582 aa6.94□□□□□ -1.3
SLIRP-203ENST00000554074 PNOCQ13519 176 aa6.94□□□□□ -1.3
SLIRP-203ENST00000554074 MAP7D1Q3KQU3 841 aa6.94□□□□□ -1.3
SLIRP-203ENST00000554074 CBWD6Q4V339 395 aa6.94□□□□□ -1.3
SLIRP-203ENST00000554074 ZNF394Q53GI3 561 aa6.94□□□□□ -1.3
SLIRP-203ENST00000554074 CBWD3Q5JTY5 395 aa6.94□□□□□ -1.3
SLIRP-203ENST00000554074 CBWD5Q5RIA9 395 aa6.94□□□□□ -1.3
SLIRP-203ENST00000554074 C10orf120Q5SQS8 335 aa6.94□□□□□ -1.3
SLIRP-203ENST00000554074 DAB2IPQ5VWQ8 1189 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms