RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 GOLGA8FQ08AF8 430 aa9.34□□□□□ -0.91
TDP1-208ENST00000553989 GOLGA8DPQ0D2H9 430 aa9.34□□□□□ -0.91
TDP1-208ENST00000553989 SYCP1Q15431 976 aa9.34□□□□□ -0.91
TDP1-208ENST00000553989 GRAMD4Q6IC98 578 aa9.34□□□□□ -0.91
TDP1-208ENST00000553989 SDE2Q6IQ49 451 aa9.34□□□□□ -0.91
TDP1-208ENST00000553989 UNC13DQ70J99 1090 aa9.34□□□□□ -0.91
TDP1-208ENST00000553989 EPM2AIP1Q7L775 607 aaPredicted RBP9.34□□□□□ -0.91
TDP1-208ENST00000553989 BBS7Q8IWZ6 715 aa9.34□□□□□ -0.91
TDP1-208ENST00000553989 SCAMP5Q8TAC9 235 aa9.34□□□□□ -0.91
TDP1-208ENST00000553989 OLIG1Q8TAK6 271 aa9.34□□□□□ -0.91
TDP1-208ENST00000553989 SCFD1Q8WVM8 642 aa9.34□□□□□ -0.91
TDP1-208ENST00000553989 JAKMIP2Q96AA8 810 aa9.34□□□□□ -0.91
TDP1-208ENST00000553989 SCNM1Q9BWG6 230 aa9.34□□□□□ -0.91
TDP1-208ENST00000553989 MAGEF1Q9HAY2 307 aa9.34□□□□□ -0.91
TDP1-208ENST00000553989 SLC39A2Q9NP94 309 aa9.34□□□□□ -0.91
TDP1-208ENST00000553989 FSCN3Q9NQT6 498 aa9.34□□□□□ -0.91
TDP1-208ENST00000553989 SPHK2Q9NRA0 654 aa9.34□□□□□ -0.91
TDP1-208ENST00000553989 TMEM74BQ9NUR3 256 aa9.34□□□□□ -0.91
TDP1-208ENST00000553989 TMEM30AQ9NV96 361 aa9.34□□□□□ -0.91
TDP1-208ENST00000553989 DNAJC17Q9NVM6 304 aaKnown RBP9.34□□□□□ -0.91
TDP1-208ENST00000553989 MBD1Q9UIS9 605 aaPredicted RBP9.34□□□□□ -0.91
TDP1-208ENST00000553989 MORC2Q9Y6X9 1032 aaPredicted RBP9.34□□□□□ -0.91
TDP1-208ENST00000553989 PTPRDP23468 1912 aa9.34□□□□□ -0.91
TDP1-208ENST00000553989 POLR2DO15514 142 aaKnown RBP9.33□□□□□ -0.92
TDP1-208ENST00000553989 HOXC11O43248 304 aaPredicted RBP9.33□□□□□ -0.92
TDP1-208ENST00000553989 NRDCO43847 1150 aa9.33□□□□□ -0.92
TDP1-208ENST00000553989 CUTAO60888 179 aa9.33□□□□□ -0.92
TDP1-208ENST00000553989 ADAM23O75077 832 aa9.33□□□□□ -0.92
TDP1-208ENST00000553989 PPP6R2O75170 966 aa9.33□□□□□ -0.92
TDP1-208ENST00000553989 STAU1O95793 577 aaKnown RBP9.33□□□□□ -0.92
TDP1-208ENST00000553989 TOP3BO95985 862 aaKnown RBP9.33□□□□□ -0.92
TDP1-208ENST00000553989 CCDC130P13994 396 aa9.33□□□□□ -0.92
TDP1-208ENST00000553989 CASP1P29466 404 aa9.33□□□□□ -0.92
TDP1-208ENST00000553989 RDXP35241 583 aaKnown RBP9.33□□□□□ -0.92
TDP1-208ENST00000553989 AFMP43652 599 aa9.33□□□□□ -0.92
TDP1-208ENST00000553989 TUBP50607 506 aa9.33□□□□□ -0.92
TDP1-208ENST00000553989 ORC1Q13415 861 aa9.33□□□□□ -0.92
TDP1-208ENST00000553989 NCOA4Q13772 614 aa9.33□□□□□ -0.92
TDP1-208ENST00000553989 DUOXA1Q1HG43 343 aa9.33□□□□□ -0.92
TDP1-208ENST00000553989 MAP7D1Q3KQU3 841 aa9.33□□□□□ -0.92
TDP1-208ENST00000553989 SLC36A4Q6YBV0 504 aa9.33□□□□□ -0.92
TDP1-208ENST00000553989 TPGS1Q6ZTW0 290 aa9.33□□□□□ -0.92
TDP1-208ENST00000553989 ACOT1Q86TX2 421 aa9.33□□□□□ -0.92
TDP1-208ENST00000553989 CHPFQ8IZ52 775 aa9.33□□□□□ -0.92
TDP1-208ENST00000553989 TERB1Q8NA31 727 aa9.33□□□□□ -0.92
TDP1-208ENST00000553989 ENGASEQ8NFI3 743 aa9.33□□□□□ -0.92
TDP1-208ENST00000553989 CEP76Q8TAP6 659 aa9.33□□□□□ -0.92
TDP1-208ENST00000553989 ZNF516Q92618 1163 aa9.33□□□□□ -0.92
TDP1-208ENST00000553989 ELMO3Q96BJ8 720 aa9.33□□□□□ -0.92
TDP1-208ENST00000553989 TIGD1Q96MW7 591 aa9.33□□□□□ -0.92
TDP1-208ENST00000553989 ZNF830Q96NB3 372 aaPredicted RBP9.33□□□□□ -0.92
TDP1-208ENST00000553989 XPO6Q96QU8 1125 aaKnown RBP9.33□□□□□ -0.92
TDP1-208ENST00000553989 C7orf25Q9BPX7 421 aa9.33□□□□□ -0.92
TDP1-208ENST00000553989 BPIFA3Q9BQP9 254 aa9.33□□□□□ -0.92
TDP1-208ENST00000553989 BBS2Q9BXC9 721 aa9.33□□□□□ -0.92
TDP1-208ENST00000553989 FBXO44Q9H4M3 255 aa9.33□□□□□ -0.92
TDP1-208ENST00000553989 TLR8Q9NR97 1041 aaKnown RBP9.33□□□□□ -0.92
TDP1-208ENST00000553989 FAM49BQ9NUQ9 324 aa9.33□□□□□ -0.92
TDP1-208ENST00000553989 FAM13BQ9NYF5 915 aa9.33□□□□□ -0.92
TDP1-208ENST00000553989 CALCOCO1Q9P1Z2 691 aa9.33□□□□□ -0.92
TDP1-208ENST00000553989 CGNQ9P2M7 1197 aaKnown RBP9.33□□□□□ -0.92
TDP1-208ENST00000553989 IMPACTQ9P2X3 320 aa9.33□□□□□ -0.92
TDP1-208ENST00000553989 LSM7Q9UK45 103 aaKnown RBP9.33□□□□□ -0.92
TDP1-208ENST00000553989 USP24Q9UPU5 2620 aa9.33□□□□□ -0.92
TDP1-208ENST00000553989 SPAARA0A1B0GVQ0 90 aa9.32□□□□□ -0.92
TDP1-208ENST00000553989 TMEM8BA6NDV4 472 aa9.32□□□□□ -0.92
TDP1-208ENST00000553989 LRRIQ3A6PVS8 624 aaPredicted RBP9.32□□□□□ -0.92
TDP1-208ENST00000553989 KIF2AO00139 706 aaPredicted RBP9.32□□□□□ -0.92
TDP1-208ENST00000553989 HYAL3O43820 417 aaPredicted RBP9.32□□□□□ -0.92
TDP1-208ENST00000553989 TLR5O60602 858 aa9.32□□□□□ -0.92
TDP1-208ENST00000553989 OPHN1O60890 802 aa9.32□□□□□ -0.92
TDP1-208ENST00000553989 NDUFS2O75306 463 aa9.32□□□□□ -0.92
TDP1-208ENST00000553989 ZNF217O75362 1048 aa9.32□□□□□ -0.92
TDP1-208ENST00000553989 GABRG2P18507 467 aa9.32□□□□□ -0.92
TDP1-208ENST00000553989 CMA1P23946 247 aa9.32□□□□□ -0.92
TDP1-208ENST00000553989 ADORA2BP29275 332 aa9.32□□□□□ -0.92
TDP1-208ENST00000553989 NTSR1P30989 418 aa9.32□□□□□ -0.92
TDP1-208ENST00000553989 HOXD12P35452 270 aa9.32□□□□□ -0.92
TDP1-208ENST00000553989 ME1P48163 572 aa9.32□□□□□ -0.92
TDP1-208ENST00000553989 AP3M2P53677 418 aa9.32□□□□□ -0.92
TDP1-208ENST00000553989 MAP3K7CLP57077 242 aa9.32□□□□□ -0.92
TDP1-208ENST00000553989 GSDMDP57764 484 aa9.32□□□□□ -0.92
TDP1-208ENST00000553989 SIM1P81133 766 aaPredicted RBP9.32□□□□□ -0.92
TDP1-208ENST00000553989 ZNF33AQ06730 810 aa9.32□□□□□ -0.92
TDP1-208ENST00000553989 IQCB1Q15051 598 aa9.32□□□□□ -0.92
TDP1-208ENST00000553989 KNOP1Q1ED39 458 aaKnown RBP9.32□□□□□ -0.92
TDP1-208ENST00000553989 SPDYCQ5MJ68 293 aa9.32□□□□□ -0.92
TDP1-208ENST00000553989 EGFLAMQ63HQ2 1017 aa9.32□□□□□ -0.92
TDP1-208ENST00000553989 SLC23A3Q6PIS1 610 aa9.32□□□□□ -0.92
TDP1-208ENST00000553989 SHC4Q6S5L8 630 aa9.32□□□□□ -0.92
TDP1-208ENST00000553989 CCDC186Q7Z3E2 898 aa9.32□□□□□ -0.92
TDP1-208ENST00000553989 RABEPKQ7Z6M1 372 aa9.32□□□□□ -0.92
TDP1-208ENST00000553989 METTL3Q86U44 580 aaKnown RBP9.32□□□□□ -0.92
TDP1-208ENST00000553989 TMEM25Q86YD3 366 aa9.32□□□□□ -0.92
TDP1-208ENST00000553989 ETFBKMTQ8IXQ9 262 aa9.32□□□□□ -0.92
TDP1-208ENST00000553989 ELOA2Q8IYF1 753 aaPredicted RBP9.32□□□□□ -0.92
TDP1-208ENST00000553989 CEP57L1Q8IYX8 460 aa9.32□□□□□ -0.92
TDP1-208ENST00000553989 RGL4Q8IZJ4 473 aa9.32□□□□□ -0.92
TDP1-208ENST00000553989 PHTF2Q8N3S3 785 aa9.32□□□□□ -0.92
TDP1-208ENST00000553989 GOLGA5Q8TBA6 731 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms