RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 FCARP24071 287 aa8.77□□□□□ -1.01
PSEN1-209ENST00000553855 PON1P27169 355 aa8.77□□□□□ -1.01
PSEN1-209ENST00000553855 GNA15P30679 374 aa8.77□□□□□ -1.01
PSEN1-209ENST00000553855 ATP5C1P36542 298 aaKnown RBP8.77□□□□□ -1.01
PSEN1-209ENST00000553855 EIF1AXP47813 144 aaKnown RBP8.77□□□□□ -1.01
PSEN1-209ENST00000553855 CLCN5P51795 746 aa8.77□□□□□ -1.01
PSEN1-209ENST00000553855 CACNA2D1P54289 1103 aa8.77□□□□□ -1.01
PSEN1-209ENST00000553855 RAPGEF1Q13905 1077 aa8.77□□□□□ -1.01
PSEN1-209ENST00000553855 MTF1Q14872 753 aa8.77□□□□□ -1.01
PSEN1-209ENST00000553855 UBXN2BQ14CS0 331 aa8.77□□□□□ -1.01
PSEN1-209ENST00000553855 TLR1Q15399 786 aa8.77□□□□□ -1.01
PSEN1-209ENST00000553855 CNGA2Q16280 664 aa8.77□□□□□ -1.01
PSEN1-209ENST00000553855 ANO6Q4KMQ2 910 aa8.77□□□□□ -1.01
PSEN1-209ENST00000553855 LCLAT1Q6UWP7 414 aa8.77□□□□□ -1.01
PSEN1-209ENST00000553855 TPRG1Q6ZUI0 275 aa8.77□□□□□ -1.01
PSEN1-209ENST00000553855 C11orf57Q6ZUT1 292 aaPredicted RBP8.77□□□□□ -1.01
PSEN1-209ENST00000553855 RSRC2Q7L4I2 434 aaKnown RBP8.77□□□□□ -1.01
PSEN1-209ENST00000553855 TMEM150AQ86TG1 271 aa8.77□□□□□ -1.01
PSEN1-209ENST00000553855 IRF2BP1Q8IU81 584 aa8.77□□□□□ -1.01
PSEN1-209ENST00000553855 CPA6Q8N4T0 437 aa8.77□□□□□ -1.01
PSEN1-209ENST00000553855 AOPEPQ8N6M6 819 aa8.77□□□□□ -1.01
PSEN1-209ENST00000553855 SCAMP5Q8TAC9 235 aa8.77□□□□□ -1.01
PSEN1-209ENST00000553855 LMO3Q8TAP4 145 aa8.77□□□□□ -1.01
PSEN1-209ENST00000553855 SH3RF2Q8TEC5 729 aa8.77□□□□□ -1.01
PSEN1-209ENST00000553855 USP13Q92995 863 aaPredicted RBP8.77□□□□□ -1.01
PSEN1-209ENST00000553855 MYO19Q96H55 970 aa8.77□□□□□ -1.01
PSEN1-209ENST00000553855 MRGPRX2Q96LB1 330 aa8.77□□□□□ -1.01
PSEN1-209ENST00000553855 NOX5Q96PH1 765 aa8.77□□□□□ -1.01
PSEN1-209ENST00000553855 LSM14BQ9BX40 385 aaKnown RBP8.77□□□□□ -1.01
PSEN1-209ENST00000553855 PLA2G2FQ9BZM2 168 aa8.77□□□□□ -1.01
PSEN1-209ENST00000553855 SMG9Q9H0W8 520 aaKnown RBP8.77□□□□□ -1.01
PSEN1-209ENST00000553855 IRF2BPLQ9H1B7 796 aa8.77□□□□□ -1.01
PSEN1-209ENST00000553855 SMOC2Q9H3U7 446 aa8.77□□□□□ -1.01
PSEN1-209ENST00000553855 TBC1D17Q9HA65 648 aa8.77□□□□□ -1.01
PSEN1-209ENST00000553855 TRPV5Q9NQA5 729 aa8.77□□□□□ -1.01
PSEN1-209ENST00000553855 FANCLQ9NW38 375 aa8.77□□□□□ -1.01
PSEN1-209ENST00000553855 DUS2Q9NX74 493 aaKnown RBP8.77□□□□□ -1.01
PSEN1-209ENST00000553855 GMIPQ9P107 970 aa8.77□□□□□ -1.01
PSEN1-209ENST00000553855 NAGPAQ9UK23 515 aa8.77□□□□□ -1.01
PSEN1-209ENST00000553855 LSM7Q9UK45 103 aaKnown RBP8.77□□□□□ -1.01
PSEN1-209ENST00000553855 DNAJC12Q9UKB3 198 aa8.77□□□□□ -1.01
PSEN1-209ENST00000553855 STRIP2Q9ULQ0 834 aa8.77□□□□□ -1.01
PSEN1-209ENST00000553855 ARHGAP26Q9UNA1 814 aa8.77□□□□□ -1.01
PSEN1-209ENST00000553855 SCML2Q9UQR0 700 aa8.77□□□□□ -1.01
PSEN1-209ENST00000553855 SH3BP1Q9Y3L3 701 aa8.77□□□□□ -1.01
PSEN1-209ENST00000553855 DAAM1Q9Y4D1 1078 aa8.77□□□□□ -1.01
PSEN1-209ENST00000553855 NCANO14594 1321 aa8.77□□□□□ -1.01
PSEN1-209ENST00000553855 KANSL1LA0AUZ9 987 aa8.76□□□□□ -1.01
PSEN1-209ENST00000553855 O00370 1275 aa8.76□□□□□ -1.01
PSEN1-209ENST00000553855 TLR5O60602 858 aa8.76□□□□□ -1.01
PSEN1-209ENST00000553855 TADA3O75528 432 aa8.76□□□□□ -1.01
PSEN1-209ENST00000553855 BEST1O76090 585 aa8.76□□□□□ -1.01
PSEN1-209ENST00000553855 PRAMEF12O95522 483 aa8.76□□□□□ -1.01
PSEN1-209ENST00000553855 NFATC1O95644 943 aa8.76□□□□□ -1.01
PSEN1-209ENST00000553855 BRD2P25440 801 aaKnown RBP8.76□□□□□ -1.01
PSEN1-209ENST00000553855 KRT9P35527 623 aa8.76□□□□□ -1.01
PSEN1-209ENST00000553855 ACADSBP45954 432 aa8.76□□□□□ -1.01
PSEN1-209ENST00000553855 ZNF165P49910 485 aa8.76□□□□□ -1.01
PSEN1-209ENST00000553855 TUBP50607 506 aa8.76□□□□□ -1.01
PSEN1-209ENST00000553855 SLC7A9P82251 487 aa8.76□□□□□ -1.01
PSEN1-209ENST00000553855 FCHO2Q0JRZ9 810 aa8.76□□□□□ -1.01
PSEN1-209ENST00000553855 KRT31Q15323 416 aa8.76□□□□□ -1.01
PSEN1-209ENST00000553855 ITPRIPL2Q3MIP1 535 aa8.76□□□□□ -1.01
PSEN1-209ENST00000553855 CDKAL1Q5VV42 579 aa8.76□□□□□ -1.01
PSEN1-209ENST00000553855 BTBD8Q5XKL5 378 aa8.76□□□□□ -1.01
PSEN1-209ENST00000553855 PIGZQ86VD9 579 aa8.76□□□□□ -1.01
PSEN1-209ENST00000553855 ZMIZ2Q8NF64 920 aa8.76□□□□□ -1.01
PSEN1-209ENST00000553855 NEK11Q8NG66 645 aa8.76□□□□□ -1.01
PSEN1-209ENST00000553855 UBA3Q8TBC4 463 aa8.76□□□□□ -1.01
PSEN1-209ENST00000553855 RNF139Q8WU17 664 aa8.76□□□□□ -1.01
PSEN1-209ENST00000553855 KAT5Q92993 513 aa8.76□□□□□ -1.01
PSEN1-209ENST00000553855 ATP2A3Q93084 1043 aa8.76□□□□□ -1.01
PSEN1-209ENST00000553855 HSFY1Q96LI6 401 aa8.76□□□□□ -1.01
PSEN1-209ENST00000553855 SPAG5Q96R06 1193 aa8.76□□□□□ -1.01
PSEN1-209ENST00000553855 MED15Q96RN5 788 aa8.76□□□□□ -1.01
PSEN1-209ENST00000553855 CYP2S1Q96SQ9 504 aa8.76□□□□□ -1.01
PSEN1-209ENST00000553855 BPIFA3Q9BQP9 254 aa8.76□□□□□ -1.01
PSEN1-209ENST00000553855 KCNH6Q9H252 994 aa8.76□□□□□ -1.01
PSEN1-209ENST00000553855 ST7Q9NRC1 585 aa8.76□□□□□ -1.01
PSEN1-209ENST00000553855 HEBP1Q9NRV9 189 aa8.76□□□□□ -1.01
PSEN1-209ENST00000553855 GKN1Q9NS71 199 aa8.76□□□□□ -1.01
PSEN1-209ENST00000553855 SMPD4Q9NXE4 827 aa8.76□□□□□ -1.01
PSEN1-209ENST00000553855 IL37Q9NZH6 218 aa8.76□□□□□ -1.01
PSEN1-209ENST00000553855 TBC1D14Q9P2M4 693 aa8.76□□□□□ -1.01
PSEN1-209ENST00000553855 SIT1Q9Y3P8 196 aa8.76□□□□□ -1.01
PSEN1-209ENST00000553855 HRH3Q9Y5N1 445 aa8.76□□□□□ -1.01
PSEN1-209ENST00000553855 CPQQ9Y646 472 aa8.76□□□□□ -1.01
PSEN1-209ENST00000553855 USP3Q9Y6I4 520 aa8.76□□□□□ -1.01
PSEN1-209ENST00000553855 PIAS3Q9Y6X2 628 aa8.76□□□□□ -1.01
PSEN1-209ENST00000553855 NCOR1O75376 2440 aa8.75□□□□□ -1.01
PSEN1-209ENST00000553855 BDP1A6H8Y1 2624 aa8.75□□□□□ -1.01
PSEN1-209ENST00000553855 SYCE3A1L190 88 aa8.75□□□□□ -1.01
PSEN1-209ENST00000553855 FAM92AA1XBS5 289 aa8.75□□□□□ -1.01
PSEN1-209ENST00000553855 LEFTY2O00292 366 aa8.75□□□□□ -1.01
PSEN1-209ENST00000553855 CYP26A1O43174 497 aa8.75□□□□□ -1.01
PSEN1-209ENST00000553855 SART1O43290 800 aaKnown RBP8.75□□□□□ -1.01
PSEN1-209ENST00000553855 FZD6O60353 706 aa8.75□□□□□ -1.01
PSEN1-209ENST00000553855 GDF9O60383 454 aa8.75□□□□□ -1.01
PSEN1-209ENST00000553855 FBXO21O94952 628 aa8.75□□□□□ -1.01
PSEN1-209ENST00000553855 ZBED1O96006 694 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms