RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 CNTN6Q9UQ52 1028 aa5.32□□□□□ -1.56
VTI1B-202ENST00000553619 INPP5FQ9Y2H2 1132 aa5.32□□□□□ -1.56
VTI1B-202ENST00000553619 CEP83Q9Y592 693 aa5.32□□□□□ -1.56
VTI1B-202ENST00000553619 SNX9Q9Y5X1 595 aa5.32□□□□□ -1.56
VTI1B-202ENST00000553619 PTPRJQ12913 1337 aa5.31□□□□□ -1.56
VTI1B-202ENST00000553619 TRIM43BA6NCK2 446 aa5.31□□□□□ -1.56
VTI1B-202ENST00000553619 ANKRD33BA6NCL7 494 aa5.31□□□□□ -1.56
VTI1B-202ENST00000553619 TBKBP1A7MCY6 615 aa5.31□□□□□ -1.56
VTI1B-202ENST00000553619 A8MXQ7 604 aa5.31□□□□□ -1.56
VTI1B-202ENST00000553619 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.31□□□□□ -1.56
VTI1B-202ENST00000553619 TMEM189-UBE2V1I3L0A0 370 aa5.31□□□□□ -1.56
VTI1B-202ENST00000553619 PTGESO14684 152 aa5.31□□□□□ -1.56
VTI1B-202ENST00000553619 THAP12O43422 761 aa5.31□□□□□ -1.56
VTI1B-202ENST00000553619 RTN2O75298 545 aa5.31□□□□□ -1.56
VTI1B-202ENST00000553619 B3GAT3O94766 335 aa5.31□□□□□ -1.56
VTI1B-202ENST00000553619 LCA5LO95447 670 aa5.31□□□□□ -1.56
VTI1B-202ENST00000553619 WEE2P0C1S8 567 aa5.31□□□□□ -1.56
VTI1B-202ENST00000553619 ODC1P11926 461 aa5.31□□□□□ -1.56
VTI1B-202ENST00000553619 CSF2RAP15509 400 aa5.31□□□□□ -1.56
VTI1B-202ENST00000553619 CYP11B1P15538 503 aa5.31□□□□□ -1.56
VTI1B-202ENST00000553619 TYMPP19971 482 aa5.31□□□□□ -1.56
VTI1B-202ENST00000553619 WARSP23381 471 aaKnown RBP5.31□□□□□ -1.56
VTI1B-202ENST00000553619 OR1G1P47890 313 aa5.31□□□□□ -1.56
VTI1B-202ENST00000553619 ALDH7A1P49419 539 aaKnown RBP5.31□□□□□ -1.56
VTI1B-202ENST00000553619 KIF11P52732 1056 aa5.31□□□□□ -1.56
VTI1B-202ENST00000553619 SLC8A3P57103 927 aa5.31□□□□□ -1.56
VTI1B-202ENST00000553619 CDR2Q01850 454 aa5.31□□□□□ -1.56
VTI1B-202ENST00000553619 GOLGA8FQ08AF8 430 aa5.31□□□□□ -1.56
VTI1B-202ENST00000553619 GOLGA8DPQ0D2H9 430 aa5.31□□□□□ -1.56
VTI1B-202ENST00000553619 GPNMBQ14956 572 aa5.31□□□□□ -1.56
VTI1B-202ENST00000553619 MAPRE1Q15691 268 aaKnown RBP5.31□□□□□ -1.56
VTI1B-202ENST00000553619 NAB2Q15742 525 aa5.31□□□□□ -1.56
VTI1B-202ENST00000553619 CNGA2Q16280 664 aa5.31□□□□□ -1.56
VTI1B-202ENST00000553619 KCNMB1Q16558 191 aa5.31□□□□□ -1.56
VTI1B-202ENST00000553619 SLC18A3Q16572 532 aa5.31□□□□□ -1.56
VTI1B-202ENST00000553619 UPP1Q16831 310 aa5.31□□□□□ -1.56
VTI1B-202ENST00000553619 ARHGAP29Q52LW3 1261 aa5.31□□□□□ -1.56
VTI1B-202ENST00000553619 CCDC122Q5T0U0 273 aa5.31□□□□□ -1.56
VTI1B-202ENST00000553619 SPOUT1Q5T280 376 aaKnown RBP5.31□□□□□ -1.56
VTI1B-202ENST00000553619 FYB2Q5VWT5 728 aa5.31□□□□□ -1.56
VTI1B-202ENST00000553619 SPOPLQ6IQ16 392 aa5.31□□□□□ -1.56
VTI1B-202ENST00000553619 ALKBH5Q6P6C2 394 aaKnown RBP5.31□□□□□ -1.56
VTI1B-202ENST00000553619 LRFN4Q6PJG9 635 aa5.31□□□□□ -1.56
VTI1B-202ENST00000553619 ZNF662Q6ZS27 426 aa5.31□□□□□ -1.56
VTI1B-202ENST00000553619 UBE2Q1Q7Z7E8 422 aa5.31□□□□□ -1.56
VTI1B-202ENST00000553619 KIAA1328Q86T90 577 aa5.31□□□□□ -1.56
VTI1B-202ENST00000553619 TMEM139Q8IV31 216 aa5.31□□□□□ -1.56
VTI1B-202ENST00000553619 CRYBG2Q8N1P7 616 aa5.31□□□□□ -1.56
VTI1B-202ENST00000553619 MFSD4AQ8N468 514 aa5.31□□□□□ -1.56
VTI1B-202ENST00000553619 RBBP8NLQ8NC74 664 aaPredicted RBP5.31□□□□□ -1.56
VTI1B-202ENST00000553619 MSANTD4Q8NCY6 345 aa5.31□□□□□ -1.56
VTI1B-202ENST00000553619 GSTCDQ8NEC7 633 aa5.31□□□□□ -1.56
VTI1B-202ENST00000553619 CXorf38Q8TB03 319 aa5.31□□□□□ -1.56
VTI1B-202ENST00000553619 PHOSPHO2Q8TCD6 241 aa5.31□□□□□ -1.56
VTI1B-202ENST00000553619 KIAA1524Q8TCG1 905 aa5.31□□□□□ -1.56
VTI1B-202ENST00000553619 C18orf25Q96B23 403 aaPredicted RBP5.31□□□□□ -1.56
VTI1B-202ENST00000553619 TRIM43Q96BQ3 446 aaPredicted RBP5.31□□□□□ -1.56
VTI1B-202ENST00000553619 COX4I2Q96KJ9 171 aa5.31□□□□□ -1.56
VTI1B-202ENST00000553619 KREMEN1Q96MU8 473 aa5.31□□□□□ -1.56
VTI1B-202ENST00000553619 CASD1Q96PB1 797 aa5.31□□□□□ -1.56
VTI1B-202ENST00000553619 NOX5Q96PH1 765 aa5.31□□□□□ -1.56
VTI1B-202ENST00000553619 WNT10AQ9GZT5 417 aa5.31□□□□□ -1.56
VTI1B-202ENST00000553619 APOBEC3GQ9HC16 384 aaKnown RBP5.31□□□□□ -1.56
VTI1B-202ENST00000553619 SEPT11Q9NVA2 429 aaKnown RBP5.31□□□□□ -1.56
VTI1B-202ENST00000553619 ARHGAP20Q9P2F6 1191 aa5.31□□□□□ -1.56
VTI1B-202ENST00000553619 MYO1AQ9UBC5 1043 aa5.31□□□□□ -1.56
VTI1B-202ENST00000553619 ADAMTS1Q9UHI8 967 aa5.31□□□□□ -1.56
VTI1B-202ENST00000553619 PUF60Q9UHX1 559 aaKnown RBP5.31□□□□□ -1.56
VTI1B-202ENST00000553619 PCDHA13Q9Y5I0 950 aa5.31□□□□□ -1.56
VTI1B-202ENST00000553619 AK5Q9Y6K8 562 aa5.31□□□□□ -1.56
VTI1B-202ENST00000553619 SCN5AQ14524 2016 aa5.31□□□□□ -1.56
VTI1B-202ENST00000553619 TET1Q8NFU7 2136 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 ATP8B3O60423 1300 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 SCN1AP35498 2009 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 MICAL3Q7RTP6 2002 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.3□□□□□ -1.56
VTI1B-202ENST00000553619 ANKRD62A6NC57 917 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 CCDC85CA6NKD9 419 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 PRR33A8MZF0 331 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 H7C4K7 107 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 RBAK-RBAKDNI3L0D1 243 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 M0QZQ0 153 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 SYN3O14994 580 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 MEFVO15553 781 aaPredicted RBP5.3□□□□□ -1.56
VTI1B-202ENST00000553619 ZNF500O60304 480 aaPredicted RBP5.3□□□□□ -1.56
VTI1B-202ENST00000553619 LRRN2O75325 713 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 CILPO75339 1184 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 DGKIO75912 1065 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 DDHD2O94830 711 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 SLITRK5O94991 958 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 BPNT1O95861 308 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 H2AFZP0C0S5 128 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 MYBL1P10243 752 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 FGFR1P11362 822 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 CD19P15391 556 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 CD58P19256 250 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 ACO1P21399 889 aaKnown RBP5.3□□□□□ -1.56
VTI1B-202ENST00000553619 PCSK1P29120 753 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 LIG3P49916 1009 aa5.3□□□□□ -1.56
VTI1B-202ENST00000553619 CLCNKBP51801 687 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms