RNA–Protein interactions for RNA: ENST00000553391.2

MTHFD1-203, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-203ENST00000553391 BEND5Q7L4P6 421 aa9.76□□□□□ -0.85
MTHFD1-203ENST00000553391 BHLHA9Q7RTU4 235 aa9.76□□□□□ -0.85
MTHFD1-203ENST00000553391 ZNF280BQ86YH2 543 aa9.76□□□□□ -0.85
MTHFD1-203ENST00000553391 PPIL6Q8IXY8 311 aa9.76□□□□□ -0.85
MTHFD1-203ENST00000553391 THEM5Q8N1Q8 247 aa9.76□□□□□ -0.85
MTHFD1-203ENST00000553391 CCDC185Q8N715 623 aa9.76□□□□□ -0.85
MTHFD1-203ENST00000553391 FAM71DQ8N9W8 422 aa9.76□□□□□ -0.85
MTHFD1-203ENST00000553391 UHMK1Q8TAS1 419 aaKnown RBP9.76□□□□□ -0.85
MTHFD1-203ENST00000553391 ZNF296Q8WUU4 475 aaPredicted RBP9.76□□□□□ -0.85
MTHFD1-203ENST00000553391 IRGQQ8WZA9 623 aa9.76□□□□□ -0.85
MTHFD1-203ENST00000553391 CENPTQ96BT3 561 aa9.76□□□□□ -0.85
MTHFD1-203ENST00000553391 PGAP3Q96FM1 320 aaPredicted RBP9.76□□□□□ -0.85
MTHFD1-203ENST00000553391 RBM15Q96T37 977 aaKnown RBP eCLIP9.76□□□□□ -0.85
MTHFD1-203ENST00000553391 PHACTR1Q9C0D0 580 aa9.76□□□□□ -0.85
MTHFD1-203ENST00000553391 DHX35Q9H5Z1 703 aaKnown RBP9.76□□□□□ -0.85
MTHFD1-203ENST00000553391 ELAC1Q9H777 363 aaKnown RBP9.76□□□□□ -0.85
MTHFD1-203ENST00000553391 POPDC2Q9HBU9 364 aa9.76□□□□□ -0.85
MTHFD1-203ENST00000553391 STARD7Q9NQZ5 370 aa9.76□□□□□ -0.85
MTHFD1-203ENST00000553391 TMEM30AQ9NV96 361 aa9.76□□□□□ -0.85
MTHFD1-203ENST00000553391 TMLHEQ9NVH6 421 aa9.76□□□□□ -0.85
MTHFD1-203ENST00000553391 RRN3Q9NYV6 651 aa9.76□□□□□ -0.85
MTHFD1-203ENST00000553391 CWC15Q9P013 229 aaKnown RBP9.76□□□□□ -0.85
MTHFD1-203ENST00000553391 RCOR3Q9P2K3 495 aaPredicted RBP9.76□□□□□ -0.85
MTHFD1-203ENST00000553391 KANSL3Q9P2N6 904 aa9.76□□□□□ -0.85
MTHFD1-203ENST00000553391 SLC12A6Q9UHW9 1150 aa9.76□□□□□ -0.85
MTHFD1-203ENST00000553391 SHOC2Q9UQ13 582 aa9.76□□□□□ -0.85
MTHFD1-203ENST00000553391 NAALADL1Q9UQQ1 740 aa9.76□□□□□ -0.85
MTHFD1-203ENST00000553391 USP3Q9Y6I4 520 aa9.76□□□□□ -0.85
MTHFD1-203ENST00000553391 YJEFN3A6XGL0 299 aa9.75□□□□□ -0.85
MTHFD1-203ENST00000553391 DCDC2CA8MYV0 355 aa9.75□□□□□ -0.85
MTHFD1-203ENST00000553391 E7ENQ6 273 aa9.75□□□□□ -0.85
MTHFD1-203ENST00000553391 E7ESA3 106 aa9.75□□□□□ -0.85
MTHFD1-203ENST00000553391 E7EVH7 732 aa9.75□□□□□ -0.85
MTHFD1-203ENST00000553391 H7C0C1 242 aa9.75□□□□□ -0.85
MTHFD1-203ENST00000553391 RGS16O15492 202 aaPredicted RBP9.75□□□□□ -0.85
MTHFD1-203ENST00000553391 B4GALT3O60512 393 aa9.75□□□□□ -0.85
MTHFD1-203ENST00000553391 GCATO75600 419 aa9.75□□□□□ -0.85
MTHFD1-203ENST00000553391 DGKIO75912 1065 aa9.75□□□□□ -0.85
MTHFD1-203ENST00000553391 OAZ2O95190 189 aa9.75□□□□□ -0.85
MTHFD1-203ENST00000553391 SELPP16109 830 aa9.75□□□□□ -0.85
MTHFD1-203ENST00000553391 TSHRP16473 764 aa9.75□□□□□ -0.85
MTHFD1-203ENST00000553391 AMPD1P23109 780 aa9.75□□□□□ -0.85
MTHFD1-203ENST00000553391 ADRA1BP35368 520 aa9.75□□□□□ -0.85
MTHFD1-203ENST00000553391 ATP5OP48047 213 aa9.75□□□□□ -0.85
MTHFD1-203ENST00000553391 HCAR3P49019 387 aa9.75□□□□□ -0.85
MTHFD1-203ENST00000553391 ATP1A2P50993 1020 aa9.75□□□□□ -0.85
MTHFD1-203ENST00000553391 RABGGTBP53611 331 aa9.75□□□□□ -0.85
MTHFD1-203ENST00000553391 ROR1Q01973 937 aa9.75□□□□□ -0.85
MTHFD1-203ENST00000553391 DCAF6Q58WW2 860 aa9.75□□□□□ -0.85
MTHFD1-203ENST00000553391 DNAJC21Q5F1R6 531 aaKnown RBP9.75□□□□□ -0.85
MTHFD1-203ENST00000553391 NOMO2Q5JPE7 1267 aa9.75□□□□□ -0.85
MTHFD1-203ENST00000553391 CLLU1OSQ5K130 101 aa9.75□□□□□ -0.85
MTHFD1-203ENST00000553391 ANKRD22Q5VYY1 191 aa9.75□□□□□ -0.85
MTHFD1-203ENST00000553391 C4orf22Q6V702 233 aa9.75□□□□□ -0.85
MTHFD1-203ENST00000553391 COLGALT2Q8IYK4 626 aa9.75□□□□□ -0.85
MTHFD1-203ENST00000553391 SIX6OS1Q8N1H7 587 aa9.75□□□□□ -0.85
MTHFD1-203ENST00000553391 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.75□□□□□ -0.85
MTHFD1-203ENST00000553391 MYLPFQ96A32 169 aa9.75□□□□□ -0.85
MTHFD1-203ENST00000553391 NTAN1Q96AB6 310 aa9.75□□□□□ -0.85
MTHFD1-203ENST00000553391 SMARCD1Q96GM5 515 aa9.75□□□□□ -0.85
MTHFD1-203ENST00000553391 C9orf72Q96LT7 481 aa9.75□□□□□ -0.85
MTHFD1-203ENST00000553391 CSPG4P5Q96PW8 444 aa9.75□□□□□ -0.85
MTHFD1-203ENST00000553391 CCDC77Q9BR77 488 aa9.75□□□□□ -0.85
MTHFD1-203ENST00000553391 FTHL17Q9BXU8 183 aa9.75□□□□□ -0.85
MTHFD1-203ENST00000553391 CENPHQ9H3R5 247 aa9.75□□□□□ -0.85
MTHFD1-203ENST00000553391 SAYSD1Q9NPB0 183 aa9.75□□□□□ -0.85
MTHFD1-203ENST00000553391 KRT82Q9NSB4 513 aa9.75□□□□□ -0.85
MTHFD1-203ENST00000553391 DNAJC17Q9NVM6 304 aaKnown RBP9.75□□□□□ -0.85
MTHFD1-203ENST00000553391 FBXW11Q9UKB1 542 aa9.75□□□□□ -0.85
MTHFD1-203ENST00000553391 STAP1Q9ULZ2 295 aa9.75□□□□□ -0.85
MTHFD1-203ENST00000553391 AP4E1Q9UPM8 1137 aa9.75□□□□□ -0.85
MTHFD1-203ENST00000553391 INPP5FQ9Y2H2 1132 aa9.75□□□□□ -0.85
MTHFD1-203ENST00000553391 CASP8AP2Q9UKL3 1982 aa9.74□□□□□ -0.85
MTHFD1-203ENST00000553391 TCRBV7S3A2A0A539 114 aa9.74□□□□□ -0.85
MTHFD1-203ENST00000553391 C5orf60A6NFR6 353 aa9.74□□□□□ -0.85
MTHFD1-203ENST00000553391 M0QYT0 321 aa9.74□□□□□ -0.85
MTHFD1-203ENST00000553391 ACSL3O95573 720 aa9.74□□□□□ -0.85
MTHFD1-203ENST00000553391 ZBED1O96006 694 aa9.74□□□□□ -0.85
MTHFD1-203ENST00000553391 F9P00740 461 aa9.74□□□□□ -0.85
MTHFD1-203ENST00000553391 ITGB1P05556 798 aa9.74□□□□□ -0.85
MTHFD1-203ENST00000553391 USP17L7P0C7H9 530 aa9.74□□□□□ -0.85
MTHFD1-203ENST00000553391 RBL1P28749 1068 aa9.74□□□□□ -0.85
MTHFD1-203ENST00000553391 RDXP35241 583 aaKnown RBP9.74□□□□□ -0.85
MTHFD1-203ENST00000553391 MAGEA6P43360 314 aa9.74□□□□□ -0.85
MTHFD1-203ENST00000553391 MMP13P45452 471 aa9.74□□□□□ -0.85
MTHFD1-203ENST00000553391 CTCFP49711 727 aaPredicted RBP9.74□□□□□ -0.85
MTHFD1-203ENST00000553391 AIF1P55008 147 aa9.74□□□□□ -0.85
MTHFD1-203ENST00000553391 GUCY1A3Q02108 690 aa9.74□□□□□ -0.85
MTHFD1-203ENST00000553391 DEUP1Q05D60 604 aa9.74□□□□□ -0.85
MTHFD1-203ENST00000553391 EIF4EBP2Q13542 120 aaPredicted RBP9.74□□□□□ -0.85
MTHFD1-203ENST00000553391 MRPL58Q14197 206 aaKnown RBP9.74□□□□□ -0.85
MTHFD1-203ENST00000553391 MAPRE1Q15691 268 aaKnown RBP9.74□□□□□ -0.85
MTHFD1-203ENST00000553391 FNBP1LQ5T0N5 605 aa9.74□□□□□ -0.85
MTHFD1-203ENST00000553391 OVOS1Q6IE37 1185 aa9.74□□□□□ -0.85
MTHFD1-203ENST00000553391 GLB1LQ6UWU2 654 aa9.74□□□□□ -0.85
MTHFD1-203ENST00000553391 CENPUQ71F23 418 aa9.74□□□□□ -0.85
MTHFD1-203ENST00000553391 B4GALNT4Q76KP1 1039 aa9.74□□□□□ -0.85
MTHFD1-203ENST00000553391 GPRIN1Q7Z2K8 1008 aa9.74□□□□□ -0.85
MTHFD1-203ENST00000553391 EXOC3L1Q86VI1 746 aa9.74□□□□□ -0.85
MTHFD1-203ENST00000553391 ZC3H18Q86VM9 953 aaKnown RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms