RNA–Protein interactions for RNA: ENST00000553247.1

LINC02407-202, Transcript of long intergenic non-protein coding RNA 2407, humanhuman

TSL 3 BASIC

Gene LINC02407, Length 1,083 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02407-202ENST00000553247 TMEM8AQ9HCN3 771 aa8.59□□□□□ -1.03
LINC02407-202ENST00000553247 CSNK1G1Q9HCP0 422 aa8.59□□□□□ -1.03
LINC02407-202ENST00000553247 GKN1Q9NS71 199 aa8.59□□□□□ -1.03
LINC02407-202ENST00000553247 TMEM30AQ9NV96 361 aa8.59□□□□□ -1.03
LINC02407-202ENST00000553247 TRPM5Q9NZQ8 1165 aa8.59□□□□□ -1.03
LINC02407-202ENST00000553247 MAGED2Q9UNF1 606 aaPredicted RBP8.59□□□□□ -1.03
LINC02407-202ENST00000553247 CCL26Q9Y258 94 aa8.59□□□□□ -1.03
LINC02407-202ENST00000553247 COQ4Q9Y3A0 265 aa8.59□□□□□ -1.03
LINC02407-202ENST00000553247 PIAS3Q9Y6X2 628 aa8.59□□□□□ -1.03
LINC02407-202ENST00000553247 GREB1Q4ZG55 1949 aa8.58□□□□□ -1.04
LINC02407-202ENST00000553247 TRAV19A0A0A6YYK7 116 aa8.58□□□□□ -1.04
LINC02407-202ENST00000553247 DBX1A6NMT0 343 aa8.58□□□□□ -1.04
LINC02407-202ENST00000553247 F8VP50 259 aa8.58□□□□□ -1.04
LINC02407-202ENST00000553247 SLC16A3O15427 465 aaKnown RBP8.58□□□□□ -1.04
LINC02407-202ENST00000553247 RTN3O95197 1032 aaPredicted RBP8.58□□□□□ -1.04
LINC02407-202ENST00000553247 OLFM2O95897 454 aa8.58□□□□□ -1.04
LINC02407-202ENST00000553247 ZDHHC11BP0C7U3 371 aa8.58□□□□□ -1.04
LINC02407-202ENST00000553247 SP9P0CG40 484 aa8.58□□□□□ -1.04
LINC02407-202ENST00000553247 HDCP19113 662 aa8.58□□□□□ -1.04
LINC02407-202ENST00000553247 BMP6P22004 513 aa8.58□□□□□ -1.04
LINC02407-202ENST00000553247 CCNE1P24864 410 aa8.58□□□□□ -1.04
LINC02407-202ENST00000553247 ANXA13P27216 316 aa8.58□□□□□ -1.04
LINC02407-202ENST00000553247 YWHAQP27348 245 aa8.58□□□□□ -1.04
LINC02407-202ENST00000553247 PDE6CP51160 858 aa8.58□□□□□ -1.04
LINC02407-202ENST00000553247 NDST1P52848 882 aa8.58□□□□□ -1.04
LINC02407-202ENST00000553247 PMS1P54277 932 aaKnown RBP8.58□□□□□ -1.04
LINC02407-202ENST00000553247 CACNA2D1P54289 1103 aa8.58□□□□□ -1.04
LINC02407-202ENST00000553247 SLC7A9P82251 487 aa8.58□□□□□ -1.04
LINC02407-202ENST00000553247 PDGFRLQ15198 375 aa8.58□□□□□ -1.04
LINC02407-202ENST00000553247 ITPRIPL2Q3MIP1 535 aa8.58□□□□□ -1.04
LINC02407-202ENST00000553247 DGKKQ5KSL6 1271 aa8.58□□□□□ -1.04
LINC02407-202ENST00000553247 FILIP1Q7Z7B0 1213 aa8.58□□□□□ -1.04
LINC02407-202ENST00000553247 SYT9Q86SS6 491 aa8.58□□□□□ -1.04
LINC02407-202ENST00000553247 ACOT1Q86TX2 421 aa8.58□□□□□ -1.04
LINC02407-202ENST00000553247 NUP93Q8N1F7 819 aa8.58□□□□□ -1.04
LINC02407-202ENST00000553247 SYNPOQ8N3V7 929 aa8.58□□□□□ -1.04
LINC02407-202ENST00000553247 OVCA2Q8WZ82 227 aa8.58□□□□□ -1.04
LINC02407-202ENST00000553247 SLC22A12Q96S37 553 aa8.58□□□□□ -1.04
LINC02407-202ENST00000553247 HNRNPABQ99729 332 aaKnown RBP8.58□□□□□ -1.04
LINC02407-202ENST00000553247 FAM126AQ9BYI3 521 aaPredicted RBP8.58□□□□□ -1.04
LINC02407-202ENST00000553247 ZNF518BQ9C0D4 1074 aa8.58□□□□□ -1.04
LINC02407-202ENST00000553247 SMG9Q9H0W8 520 aaKnown RBP8.58□□□□□ -1.04
LINC02407-202ENST00000553247 CHRDQ9H2X0 955 aa8.58□□□□□ -1.04
LINC02407-202ENST00000553247 LMAN1LQ9HAT1 526 aa8.58□□□□□ -1.04
LINC02407-202ENST00000553247 APOBEC3GQ9HC16 384 aaKnown RBP8.58□□□□□ -1.04
LINC02407-202ENST00000553247 ARHGAP26Q9UNA1 814 aa8.58□□□□□ -1.04
LINC02407-202ENST00000553247 DNAH14Q0VDD8 3507 aa8.58□□□□□ -1.04
LINC02407-202ENST00000553247 PTPRDP23468 1912 aa8.58□□□□□ -1.04
LINC02407-202ENST00000553247 NUP210Q8TEM1 1887 aaPredicted RBP8.57□□□□□ -1.04
LINC02407-202ENST00000553247 ANAPC1Q9H1A4 1944 aa8.57□□□□□ -1.04
LINC02407-202ENST00000553247 ZFHX4Q86UP3 3567 aa8.57□□□□□ -1.04
LINC02407-202ENST00000553247 SPECC1L-ADORA2AF8WAN1 911 aa8.57□□□□□ -1.04
LINC02407-202ENST00000553247 CLDN5O00501 218 aa8.57□□□□□ -1.04
LINC02407-202ENST00000553247 TRDMT1O14717 391 aaKnown RBP8.57□□□□□ -1.04
LINC02407-202ENST00000553247 KINO60870 393 aaKnown RBP8.57□□□□□ -1.04
LINC02407-202ENST00000553247 GADD45BO75293 160 aaPredicted RBP8.57□□□□□ -1.04
LINC02407-202ENST00000553247 CILPO75339 1184 aa8.57□□□□□ -1.04
LINC02407-202ENST00000553247 PAPSS2O95340 614 aaPredicted RBP8.57□□□□□ -1.04
LINC02407-202ENST00000553247 TRIM49P0CI25 452 aa8.57□□□□□ -1.04
LINC02407-202ENST00000553247 TRIM49CP0CI26 452 aa8.57□□□□□ -1.04
LINC02407-202ENST00000553247 EPB41P11171 864 aaKnown RBP8.57□□□□□ -1.04
LINC02407-202ENST00000553247 RAP1GAPP47736 663 aa8.57□□□□□ -1.04
LINC02407-202ENST00000553247 KPNA1P52294 538 aaPredicted RBP8.57□□□□□ -1.04
LINC02407-202ENST00000553247 AMPD2Q01433 879 aa8.57□□□□□ -1.04
LINC02407-202ENST00000553247 TAF10Q12962 218 aa8.57□□□□□ -1.04
LINC02407-202ENST00000553247 RUNX3Q13761 415 aa8.57□□□□□ -1.04
LINC02407-202ENST00000553247 MORC3Q14149 939 aa8.57□□□□□ -1.04
LINC02407-202ENST00000553247 ZNF77Q15935 545 aa8.57□□□□□ -1.04
LINC02407-202ENST00000553247 SPOPLQ6IQ16 392 aa8.57□□□□□ -1.04
LINC02407-202ENST00000553247 FRMD5Q7Z6J6 570 aa8.57□□□□□ -1.04
LINC02407-202ENST00000553247 ARL14EPQ8N8R7 260 aaPredicted RBP8.57□□□□□ -1.04
LINC02407-202ENST00000553247 STKLD1Q8NE28 680 aa8.57□□□□□ -1.04
LINC02407-202ENST00000553247 FBXL13Q8NEE6 735 aa8.57□□□□□ -1.04
LINC02407-202ENST00000553247 ZMIZ2Q8NF64 920 aa8.57□□□□□ -1.04
LINC02407-202ENST00000553247 RIN3Q8TB24 985 aa8.57□□□□□ -1.04
LINC02407-202ENST00000553247 OSCP1Q8WVF1 389 aa8.57□□□□□ -1.04
LINC02407-202ENST00000553247 SEMA4DQ92854 862 aa8.57□□□□□ -1.04
LINC02407-202ENST00000553247 ERCC4Q92889 916 aaPredicted RBP8.57□□□□□ -1.04
LINC02407-202ENST00000553247 ZFYVE19Q96K21 471 aa8.57□□□□□ -1.04
LINC02407-202ENST00000553247 CEP63Q96MT8 703 aa8.57□□□□□ -1.04
LINC02407-202ENST00000553247 SLITRK1Q96PX8 696 aa8.57□□□□□ -1.04
LINC02407-202ENST00000553247 KCNK16Q96T55 309 aa8.57□□□□□ -1.04
LINC02407-202ENST00000553247 TSG101Q99816 390 aa8.57□□□□□ -1.04
LINC02407-202ENST00000553247 DUSP9Q99956 384 aaKnown RBP8.57□□□□□ -1.04
LINC02407-202ENST00000553247 NT5C1AQ9BXI3 368 aa8.57□□□□□ -1.04
LINC02407-202ENST00000553247 UBXN6Q9BZV1 441 aa8.57□□□□□ -1.04
LINC02407-202ENST00000553247 IMPG2Q9BZV3 1241 aa8.57□□□□□ -1.04
LINC02407-202ENST00000553247 NIF3L1Q9GZT8 377 aa8.57□□□□□ -1.04
LINC02407-202ENST00000553247 RNF38Q9H0F5 515 aa8.57□□□□□ -1.04
LINC02407-202ENST00000553247 METTL14Q9HCE5 456 aaKnown RBP8.57□□□□□ -1.04
LINC02407-202ENST00000553247 DMAP1Q9NPF5 467 aaPredicted RBP8.57□□□□□ -1.04
LINC02407-202ENST00000553247 HPS4Q9NQG7 708 aa8.57□□□□□ -1.04
LINC02407-202ENST00000553247 PRMT8Q9NR22 394 aaPredicted RBP8.57□□□□□ -1.04
LINC02407-202ENST00000553247 RAB6BQ9NRW1 208 aa8.57□□□□□ -1.04
LINC02407-202ENST00000553247 FAM86C1Q9NVL1 165 aa8.57□□□□□ -1.04
LINC02407-202ENST00000553247 RAB20Q9NX57 234 aa8.57□□□□□ -1.04
LINC02407-202ENST00000553247 GTSE1Q9NYZ3 720 aa8.57□□□□□ -1.04
LINC02407-202ENST00000553247 CHMP5Q9NZZ3 219 aa8.57□□□□□ -1.04
LINC02407-202ENST00000553247 MAN1B1Q9UKM7 699 aa8.57□□□□□ -1.04
LINC02407-202ENST00000553247 ATP8B3O60423 1300 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms