RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 KIAA1257Q9ULG3 409 aa8.51□□□□□ -1.05
CHPT1-208ENST00000552215 CNPP09543 421 aaKnown RBP8.5□□□□□ -1.05
CHPT1-208ENST00000552215 SETSIPP0DME0 302 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 ACADSBP45954 432 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 ERVFC1P60507 584 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 USP46P62068 366 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 SMAD3P84022 425 aaKnown RBP8.5□□□□□ -1.05
CHPT1-208ENST00000552215 GPS1Q13098 491 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 CCDC137Q6PK04 289 aaKnown RBP8.5□□□□□ -1.05
CHPT1-208ENST00000552215 C15orf39Q6ZRI6 1047 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 GRASPQ7Z6J2 395 aaPredicted RBP8.5□□□□□ -1.05
CHPT1-208ENST00000552215 SLFN11Q7Z7L1 901 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 XYLT1Q86Y38 959 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 WDTC1Q8N5D0 677 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 RNF10Q8N5U6 811 aaKnown RBP8.5□□□□□ -1.05
CHPT1-208ENST00000552215 BCL7CQ8WUZ0 217 aaPredicted RBP8.5□□□□□ -1.05
CHPT1-208ENST00000552215 NSMCE1Q8WV22 266 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 SMG7Q92540 1137 aaKnown RBP8.5□□□□□ -1.05
CHPT1-208ENST00000552215 SUSD3Q96L08 255 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 DAAM1Q9Y4D1 1078 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 MYH10P35580 1976 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 TYW5A2RUC4 315 aaKnown RBP8.5□□□□□ -1.05
CHPT1-208ENST00000552215 SART1O43290 800 aaKnown RBP8.5□□□□□ -1.05
CHPT1-208ENST00000552215 PROSCO94903 275 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 KRT7P08729 469 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 RBP3P10745 1247 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 TBX4P57082 545 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 DR1Q01658 176 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 PIGHQ14442 188 aaPredicted RBP8.5□□□□□ -1.05
CHPT1-208ENST00000552215 TCEA2Q15560 299 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 TMEM240Q5SV17 173 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 HS6ST3Q8IZP7 471 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 PPP2R3CQ969Q6 453 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 RPGRIP1Q96KN7 1286 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 TOX2Q96NM4 488 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 CNPY3Q9BT09 278 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 ARFGAP3Q9NP61 516 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 TRPM7Q96QT4 1865 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 H0Y626 953 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 CBX4O00257 560 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 MYBL1P10243 752 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 GOT1P17174 413 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 TUFMP49411 452 aaKnown RBP8.5□□□□□ -1.05
CHPT1-208ENST00000552215 MRPS5P82675 430 aaKnown RBP8.5□□□□□ -1.05
CHPT1-208ENST00000552215 OGDHQ02218 1023 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 RSPO2Q6UXX9 243 aaPredicted RBP8.5□□□□□ -1.05
CHPT1-208ENST00000552215 ANKRD33Q7Z3H0 272 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 DNAJB7Q7Z6W7 309 aaPredicted RBP8.5□□□□□ -1.05
CHPT1-208ENST00000552215 LGI2Q8N0V4 545 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 ACBD6Q9BR61 282 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 WDR35Q9P2L0 1181 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 TBK1Q9UHD2 729 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 DERAQ9Y315 318 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 NR2E1Q9Y466 385 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 FAM47DPA6NHR8 397 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 TJP3O95049 919 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 ACSL3O95573 720 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 EPCAMP16422 314 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 TUBP50607 506 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 KCNQ1P51787 676 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 CBX1P83916 185 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 C1QBPQ07021 282 aaKnown RBP8.5□□□□□ -1.05
CHPT1-208ENST00000552215 TRADDQ15628 312 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 CA9Q16790 459 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 WHAMMP3Q1A5X7 153 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 ARHGEF18Q6ZSZ5 1173 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 DDX53Q86TM3 631 aaKnown RBP8.5□□□□□ -1.05
CHPT1-208ENST00000552215 CCDC185Q8N715 623 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 COLGALT1Q8NBJ5 622 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 OR6K2Q8NGY2 324 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 UROC1Q96N76 676 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 POPDC2Q9HBU9 364 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 TLR8Q9NR97 1041 aaKnown RBP8.5□□□□□ -1.05
CHPT1-208ENST00000552215 XPO7Q9UIA9 1087 aaKnown RBP8.5□□□□□ -1.05
CHPT1-208ENST00000552215 PCDHB8Q9UN66 801 aa8.5□□□□□ -1.05
CHPT1-208ENST00000552215 WDR27A2RRH5 827 aa8.49□□□□□ -1.05
CHPT1-208ENST00000552215 USP12O75317 370 aa8.49□□□□□ -1.05
CHPT1-208ENST00000552215 ATF2P15336 505 aa8.49□□□□□ -1.05
CHPT1-208ENST00000552215 SESN2P58004 480 aaPredicted RBP8.49□□□□□ -1.05
CHPT1-208ENST00000552215 DSC3Q14574 896 aa8.49□□□□□ -1.05
CHPT1-208ENST00000552215 NYAP1Q6ZVC0 841 aa8.49□□□□□ -1.05
CHPT1-208ENST00000552215 NT5DC3Q86UY8 548 aa8.49□□□□□ -1.05
CHPT1-208ENST00000552215 ZC3H3Q8IXZ2 948 aaKnown RBP8.49□□□□□ -1.05
CHPT1-208ENST00000552215 YAF2Q8IY57 180 aa8.49□□□□□ -1.05
CHPT1-208ENST00000552215 C3orf20Q8ND61 904 aa8.49□□□□□ -1.05
CHPT1-208ENST00000552215 ZFYVE19Q96K21 471 aa8.49□□□□□ -1.05
CHPT1-208ENST00000552215 PARD6BQ9BYG5 372 aa8.49□□□□□ -1.05
CHPT1-208ENST00000552215 GOLGA6L7A0A1B0GV03 622 aa8.49□□□□□ -1.05
CHPT1-208ENST00000552215 CCDC66A2RUB6 948 aa8.49□□□□□ -1.05
CHPT1-208ENST00000552215 GOLGA6L10A6NI86 522 aa8.49□□□□□ -1.05
CHPT1-208ENST00000552215 HSF2BPO75031 334 aa8.49□□□□□ -1.05
CHPT1-208ENST00000552215 ECEL1O95672 775 aa8.49□□□□□ -1.05
CHPT1-208ENST00000552215 APRTP07741 180 aa8.49□□□□□ -1.05
CHPT1-208ENST00000552215 HPDP32754 393 aaPredicted RBP8.49□□□□□ -1.05
CHPT1-208ENST00000552215 WASP42768 502 aa8.49□□□□□ -1.05
CHPT1-208ENST00000552215 SPARCL1Q14515 664 aa8.49□□□□□ -1.05
CHPT1-208ENST00000552215 GPR158Q5T848 1215 aa8.49□□□□□ -1.05
CHPT1-208ENST00000552215 ANKMY2Q8IV38 441 aa8.49□□□□□ -1.05
CHPT1-208ENST00000552215 SLC25A41Q8N5S1 370 aa8.49□□□□□ -1.05
CHPT1-208ENST00000552215 ACTL9Q8TC94 416 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms