RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 SLC2A14Q8TDB8 520 aa14.98□□□□□ -0.01
CHMP1A-210ENST00000551981 ERLEC1Q96DZ1 483 aa14.98□□□□□ -0.01
CHMP1A-210ENST00000551981 CAMK1GQ96NX5 476 aa14.98□□□□□ -0.01
CHMP1A-210ENST00000551981 SMOQ99835 787 aa14.98□□□□□ -0.01
CHMP1A-210ENST00000551981 KLF16Q9BXK1 252 aaPredicted RBP14.98□□□□□ -0.01
CHMP1A-210ENST00000551981 GZF1Q9H116 711 aaPredicted RBP14.98□□□□□ -0.01
CHMP1A-210ENST00000551981 ZSCAN16Q9H4T2 348 aaPredicted RBP14.98□□□□□ -0.01
CHMP1A-210ENST00000551981 CYLDQ9NQC7 956 aa14.98□□□□□ -0.01
CHMP1A-210ENST00000551981 CACNA2D2Q9NY47 1150 aa14.98□□□□□ -0.01
CHMP1A-210ENST00000551981 APOBEC2Q9Y235 224 aaKnown RBP14.98□□□□□ -0.01
CHMP1A-210ENST00000551981 RAD54BQ9Y620 910 aa14.98□□□□□ -0.01
CHMP1A-210ENST00000551981 SMG1Q96Q15 3661 aaKnown RBP14.98□□□□□ -0.01
CHMP1A-210ENST00000551981 GCN1Q92616 2671 aaKnown RBP14.97□□□□□ -0.01
CHMP1A-210ENST00000551981 A0A1B0GTW7 788 aa14.97□□□□□ -0.01
CHMP1A-210ENST00000551981 TAF4O00268 1085 aa14.97□□□□□ -0.01
CHMP1A-210ENST00000551981 GREM1O60565 184 aa14.97□□□□□ -0.01
CHMP1A-210ENST00000551981 TBX18O95935 607 aa14.97□□□□□ -0.01
CHMP1A-210ENST00000551981 CAPNS1P04632 268 aa14.97□□□□□ -0.01
CHMP1A-210ENST00000551981 CCDC130P13994 396 aa14.97□□□□□ -0.01
CHMP1A-210ENST00000551981 NASPP49321 788 aaPredicted RBP14.97□□□□□ -0.01
CHMP1A-210ENST00000551981 MAP3K7CLP57077 242 aa14.97□□□□□ -0.01
CHMP1A-210ENST00000551981 GRIK2Q13002 908 aa14.97□□□□□ -0.01
CHMP1A-210ENST00000551981 NCOA4Q13772 614 aa14.97□□□□□ -0.01
CHMP1A-210ENST00000551981 TOGARAM2Q6ZUX3 1019 aa14.97□□□□□ -0.01
CHMP1A-210ENST00000551981 UNC13DQ70J99 1090 aa14.97□□□□□ -0.01
CHMP1A-210ENST00000551981 METTL3Q86U44 580 aaKnown RBP14.97□□□□□ -0.01
CHMP1A-210ENST00000551981 C12orf56Q8IXR9 622 aa14.97□□□□□ -0.01
CHMP1A-210ENST00000551981 GOLGA5Q8TBA6 731 aa14.97□□□□□ -0.01
CHMP1A-210ENST00000551981 DHX58Q96C10 678 aa14.97□□□□□ -0.01
CHMP1A-210ENST00000551981 C7orf25Q9BPX7 421 aa14.97□□□□□ -0.01
CHMP1A-210ENST00000551981 SLC6A17Q9H1V8 727 aa14.97□□□□□ -0.01
CHMP1A-210ENST00000551981 CCDC86Q9H6F5 360 aaKnown RBP14.97□□□□□ -0.01
CHMP1A-210ENST00000551981 MAGEF1Q9HAY2 307 aa14.97□□□□□ -0.01
CHMP1A-210ENST00000551981 CSNK1G1Q9HCP0 422 aa14.97□□□□□ -0.01
CHMP1A-210ENST00000551981 TFIP11Q9UBB9 837 aaKnown RBP14.97□□□□□ -0.01
CHMP1A-210ENST00000551981 NFE2L3Q9Y4A8 694 aa14.97□□□□□ -0.01
CHMP1A-210ENST00000551981 GPSM3Q9Y4H4 160 aa14.97□□□□□ -0.01
CHMP1A-210ENST00000551981 NPC1O15118 1278 aa14.96□□□□□ -0.01
CHMP1A-210ENST00000551981 FAM200BP0CF97 657 aa14.96□□□□□ -0.01
CHMP1A-210ENST00000551981 CASP4P49662 377 aa14.96□□□□□ -0.01
CHMP1A-210ENST00000551981 ZNF132P52740 706 aa14.96□□□□□ -0.01
CHMP1A-210ENST00000551981 ACACAQ13085 2346 aa14.96□□□□□ -0.01
CHMP1A-210ENST00000551981 E2F5Q15329 346 aa14.96□□□□□ -0.01
CHMP1A-210ENST00000551981 BMT2Q1RMZ1 405 aa14.96□□□□□ -0.01
CHMP1A-210ENST00000551981 KLHDC10Q6PID8 442 aa14.96□□□□□ -0.01
CHMP1A-210ENST00000551981 CCNI2Q6ZMN8 369 aaPredicted RBP14.96□□□□□ -0.01
CHMP1A-210ENST00000551981 TADA2BQ86TJ2 420 aa14.96□□□□□ -0.01
CHMP1A-210ENST00000551981 UNC93AQ86WB7 457 aa14.96□□□□□ -0.01
CHMP1A-210ENST00000551981 PNPLA1Q8N8W4 532 aa14.96□□□□□ -0.01
CHMP1A-210ENST00000551981 ZMIZ2Q8NF64 920 aa14.96□□□□□ -0.01
CHMP1A-210ENST00000551981 TOE1Q96GM8 510 aaKnown RBP14.96□□□□□ -0.01
CHMP1A-210ENST00000551981 PRDM16Q9HAZ2 1276 aa14.96□□□□□ -0.01
CHMP1A-210ENST00000551981 CD93Q9NPY3 652 aa14.96□□□□□ -0.01
CHMP1A-210ENST00000551981 SCML2Q9UQR0 700 aa14.96□□□□□ -0.01
CHMP1A-210ENST00000551981 LRRIQ3A6PVS8 624 aaPredicted RBP14.95□□□□□ -0.02
CHMP1A-210ENST00000551981 SPTLC2O15270 562 aa14.95□□□□□ -0.02
CHMP1A-210ENST00000551981 CYP26A1O43174 497 aa14.95□□□□□ -0.02
CHMP1A-210ENST00000551981 BEST1O76090 585 aa14.95□□□□□ -0.02
CHMP1A-210ENST00000551981 CER1O95813 267 aa14.95□□□□□ -0.02
CHMP1A-210ENST00000551981 CISD3P0C7P0 127 aa14.95□□□□□ -0.02
CHMP1A-210ENST00000551981 NCAM1P13591 858 aa14.95□□□□□ -0.02
CHMP1A-210ENST00000551981 MAOBP27338 520 aa14.95□□□□□ -0.02
CHMP1A-210ENST00000551981 OXTRP30559 389 aa14.95□□□□□ -0.02
CHMP1A-210ENST00000551981 PLA2G4AP47712 749 aa14.95□□□□□ -0.02
CHMP1A-210ENST00000551981 PGFP49763 221 aa14.95□□□□□ -0.02
CHMP1A-210ENST00000551981 CLDN10P78369 228 aa14.95□□□□□ -0.02
CHMP1A-210ENST00000551981 KNOP1Q1ED39 458 aaKnown RBP14.95□□□□□ -0.02
CHMP1A-210ENST00000551981 SGSM1Q2NKQ1 1148 aa14.95□□□□□ -0.02
CHMP1A-210ENST00000551981 FUT11Q495W5 492 aa14.95□□□□□ -0.02
CHMP1A-210ENST00000551981 C19orf48Q6RUI8 117 aa14.95□□□□□ -0.02
CHMP1A-210ENST00000551981 GLRX5Q86SX6 157 aa14.95□□□□□ -0.02
CHMP1A-210ENST00000551981 CRYBG2Q8N1P7 616 aa14.95□□□□□ -0.02
CHMP1A-210ENST00000551981 ZCCHC9Q8N567 271 aaKnown RBP14.95□□□□□ -0.02
CHMP1A-210ENST00000551981 LINC00301Q8NCQ3 95 aa14.95□□□□□ -0.02
CHMP1A-210ENST00000551981 CADM4Q8NFZ8 388 aa14.95□□□□□ -0.02
CHMP1A-210ENST00000551981 SETD7Q8WTS6 366 aaKnown RBP14.95□□□□□ -0.02
CHMP1A-210ENST00000551981 UCMAQ8WVF2 138 aa14.95□□□□□ -0.02
CHMP1A-210ENST00000551981 DNASE2BQ8WZ79 361 aa14.95□□□□□ -0.02
CHMP1A-210ENST00000551981 TAF4BQ92750 862 aa14.95□□□□□ -0.02
CHMP1A-210ENST00000551981 BHMTQ93088 406 aa14.95□□□□□ -0.02
CHMP1A-210ENST00000551981 SDCBP2Q9H190 292 aa14.95□□□□□ -0.02
CHMP1A-210ENST00000551981 MIR1-1HGQ9H1L0 117 aa14.95□□□□□ -0.02
CHMP1A-210ENST00000551981 FAM49BQ9NUQ9 324 aa14.95□□□□□ -0.02
CHMP1A-210ENST00000551981 DNMT3LQ9UJW3 386 aa14.95□□□□□ -0.02
CHMP1A-210ENST00000551981 ZNF510Q9Y2H8 683 aa14.95□□□□□ -0.02
CHMP1A-210ENST00000551981 PCDHA5Q9Y5H7 936 aa14.95□□□□□ -0.02
CHMP1A-210ENST00000551981 STON1Q9Y6Q2 735 aa14.95□□□□□ -0.02
CHMP1A-210ENST00000551981 WASH3PC4AMC7 463 aa14.94□□□□□ -0.02
CHMP1A-210ENST00000551981 SYNCRIPO60506 623 aaKnown RBP14.94□□□□□ -0.02
CHMP1A-210ENST00000551981 PPP6R2O75170 966 aa14.94□□□□□ -0.02
CHMP1A-210ENST00000551981 C4BPAP04003 597 aaKnown RBP14.94□□□□□ -0.02
CHMP1A-210ENST00000551981 RPN1P04843 607 aaKnown RBP14.94□□□□□ -0.02
CHMP1A-210ENST00000551981 ZNF883P0CG24 379 aa14.94□□□□□ -0.02
CHMP1A-210ENST00000551981 RARGP13631 454 aa14.94□□□□□ -0.02
CHMP1A-210ENST00000551981 ADORA2BP29275 332 aa14.94□□□□□ -0.02
CHMP1A-210ENST00000551981 NDST1P52848 882 aa14.94□□□□□ -0.02
CHMP1A-210ENST00000551981 EHHADHQ08426 723 aa14.94□□□□□ -0.02
CHMP1A-210ENST00000551981 ORC1Q13415 861 aa14.94□□□□□ -0.02
CHMP1A-210ENST00000551981 C10orf120Q5SQS8 335 aa14.94□□□□□ -0.02
CHMP1A-210ENST00000551981 IL27RAQ6UWB1 636 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms