RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 IGSF8Q969P0 613 aa16.2■□□□□ 0.18
CACNB3-220ENST00000551716 ERLEC1Q96DZ1 483 aa16.2■□□□□ 0.18
CACNB3-220ENST00000551716 SAAL1Q96ER3 474 aa16.2■□□□□ 0.18
CACNB3-220ENST00000551716 ZSCAN31Q96LW9 406 aaPredicted RBP16.2■□□□□ 0.18
CACNB3-220ENST00000551716 STRA6Q9BX79 667 aa16.2■□□□□ 0.18
CACNB3-220ENST00000551716 MRPL44Q9H9J2 332 aaKnown RBP16.2■□□□□ 0.18
CACNB3-220ENST00000551716 PDE11AQ9HCR9 933 aa16.2■□□□□ 0.18
CACNB3-220ENST00000551716 FTSJ1Q9UET6 329 aa16.2■□□□□ 0.18
CACNB3-220ENST00000551716 LSM7Q9UK45 103 aaKnown RBP16.2■□□□□ 0.18
CACNB3-220ENST00000551716 AK5Q9Y6K8 562 aa16.2■□□□□ 0.18
CACNB3-220ENST00000551716 MYOFQ9NZM1 2061 aa16.2■□□□□ 0.18
CACNB3-220ENST00000551716 ATP8B3O60423 1300 aa16.19■□□□□ 0.18
CACNB3-220ENST00000551716 WASH3PC4AMC7 463 aa16.19■□□□□ 0.18
CACNB3-220ENST00000551716 KIAA0391O15091 583 aaKnown RBP16.19■□□□□ 0.18
CACNB3-220ENST00000551716 PPP1R37O75864 691 aa16.19■□□□□ 0.18
CACNB3-220ENST00000551716 CISD3P0C7P0 127 aa16.19■□□□□ 0.18
CACNB3-220ENST00000551716 CCT8P50990 548 aa16.19■□□□□ 0.18
CACNB3-220ENST00000551716 SEMG2Q02383 582 aa16.19■□□□□ 0.18
CACNB3-220ENST00000551716 L1TD1Q5T7N2 865 aaKnown RBP16.19■□□□□ 0.18
CACNB3-220ENST00000551716 OR6B3Q8NGW1 331 aa16.19■□□□□ 0.18
CACNB3-220ENST00000551716 LARP4BQ92615 738 aaKnown RBP16.19■□□□□ 0.18
CACNB3-220ENST00000551716 WBP1Q96G27 269 aa16.19■□□□□ 0.18
CACNB3-220ENST00000551716 NRSN2Q9GZP1 204 aa16.19■□□□□ 0.18
CACNB3-220ENST00000551716 MKRN2Q9H000 416 aaKnown RBP16.19■□□□□ 0.18
CACNB3-220ENST00000551716 CCSER2Q9H7U1 834 aa16.19■□□□□ 0.18
CACNB3-220ENST00000551716 IL37Q9NZH6 218 aa16.19■□□□□ 0.18
CACNB3-220ENST00000551716 ANKRD6Q9Y2G4 727 aa16.19■□□□□ 0.18
CACNB3-220ENST00000551716 KIF3AQ9Y496 699 aa16.19■□□□□ 0.18
CACNB3-220ENST00000551716 KCNJ18B7U540 433 aa16.18■□□□□ 0.18
CACNB3-220ENST00000551716 ZDHHC11BP0C7U3 371 aa16.18■□□□□ 0.18
CACNB3-220ENST00000551716 GAP43P17677 238 aa16.18■□□□□ 0.18
CACNB3-220ENST00000551716 GRIA4P48058 902 aa16.18■□□□□ 0.18
CACNB3-220ENST00000551716 ALCAMQ13740 583 aa16.18■□□□□ 0.18
CACNB3-220ENST00000551716 RTP5Q14D33 572 aa16.18■□□□□ 0.18
CACNB3-220ENST00000551716 SCARA3Q6AZY7 606 aa16.18■□□□□ 0.18
CACNB3-220ENST00000551716 MCTP1Q6DN14 999 aa16.18■□□□□ 0.18
CACNB3-220ENST00000551716 TPGS1Q6ZTW0 290 aa16.18■□□□□ 0.18
CACNB3-220ENST00000551716 SFR1Q86XK3 245 aa16.18■□□□□ 0.18
CACNB3-220ENST00000551716 SNIP1Q8TAD8 396 aaKnown RBP16.18■□□□□ 0.18
CACNB3-220ENST00000551716 ZNF518BQ9C0D4 1074 aa16.18■□□□□ 0.18
CACNB3-220ENST00000551716 IKZF4Q9H2S9 585 aa16.18■□□□□ 0.18
CACNB3-220ENST00000551716 THAP10Q9P2Z0 257 aaPredicted RBP16.18■□□□□ 0.18
CACNB3-220ENST00000551716 SLC27A6Q9Y2P4 619 aa16.18■□□□□ 0.18
CACNB3-220ENST00000551716 SNX11Q9Y5W9 270 aa16.18■□□□□ 0.18
CACNB3-220ENST00000551716 TENM4Q6N022 2769 aa16.18■□□□□ 0.18
CACNB3-220ENST00000551716 CABIN1Q9Y6J0 2220 aa16.18■□□□□ 0.18
CACNB3-220ENST00000551716 GOLGA8IPA6NC78 632 aa16.17■□□□□ 0.18
CACNB3-220ENST00000551716 GOLGA8JA6NMD2 632 aa16.17■□□□□ 0.18
CACNB3-220ENST00000551716 ERVH48-1M5A8F1 160 aa16.17■□□□□ 0.18
CACNB3-220ENST00000551716 PAPSS1O43252 624 aaPredicted RBP16.17■□□□□ 0.18
CACNB3-220ENST00000551716 PRPF6O94906 941 aaKnown RBP16.17■□□□□ 0.18
CACNB3-220ENST00000551716 IRF1P10914 325 aa16.17■□□□□ 0.18
CACNB3-220ENST00000551716 ACO1P21399 889 aaKnown RBP16.17■□□□□ 0.18
CACNB3-220ENST00000551716 ENPP2Q13822 863 aa16.17■□□□□ 0.18
CACNB3-220ENST00000551716 GPD1LQ8N335 351 aa16.17■□□□□ 0.18
CACNB3-220ENST00000551716 FGF11Q92914 225 aa16.17■□□□□ 0.18
CACNB3-220ENST00000551716 MRPL45Q9BRJ2 306 aaKnown RBP16.17■□□□□ 0.18
CACNB3-220ENST00000551716 B3GNT5Q9BYG0 378 aa16.17■□□□□ 0.18
CACNB3-220ENST00000551716 CLMPQ9H6B4 373 aa16.17■□□□□ 0.18
CACNB3-220ENST00000551716 GMIPQ9P107 970 aa16.17■□□□□ 0.18
CACNB3-220ENST00000551716 FBXO10Q9UK96 956 aa16.17■□□□□ 0.18
CACNB3-220ENST00000551716 SPTA1P02549 2419 aa16.17■□□□□ 0.18
CACNB3-220ENST00000551716 KNL1Q8NG31 2342 aa16.17■□□□□ 0.18
CACNB3-220ENST00000551716 PTPRQQ9UMZ3 2332 aa16.16■□□□□ 0.18
CACNB3-220ENST00000551716 FAM92AA1XBS5 289 aa16.16■□□□□ 0.18
CACNB3-220ENST00000551716 ZNF233A6NK53 670 aa16.16■□□□□ 0.18
CACNB3-220ENST00000551716 A8MXQ7 604 aa16.16■□□□□ 0.18
CACNB3-220ENST00000551716 TLX3O43711 291 aaPredicted RBP16.16■□□□□ 0.18
CACNB3-220ENST00000551716 GREM1O60565 184 aa16.16■□□□□ 0.18
CACNB3-220ENST00000551716 TLR5O60602 858 aa16.16■□□□□ 0.18
CACNB3-220ENST00000551716 ATP5C1P36542 298 aaKnown RBP16.16■□□□□ 0.18
CACNB3-220ENST00000551716 LONP1P36776 959 aaKnown RBP16.16■□□□□ 0.18
CACNB3-220ENST00000551716 CACNA2D1P54289 1103 aa16.16■□□□□ 0.18
CACNB3-220ENST00000551716 CDH8P55286 799 aa16.16■□□□□ 0.18
CACNB3-220ENST00000551716 KCNA1Q09470 495 aa16.16■□□□□ 0.18
CACNB3-220ENST00000551716 TAF1BQ53T94 588 aaPredicted RBP16.16■□□□□ 0.18
CACNB3-220ENST00000551716 B3GALNT2Q8NCR0 500 aa16.16■□□□□ 0.18
CACNB3-220ENST00000551716 ZSWIM2Q8NEG5 633 aa16.16■□□□□ 0.18
CACNB3-220ENST00000551716 SCAMP5Q8TAC9 235 aa16.16■□□□□ 0.18
CACNB3-220ENST00000551716 NOC3LQ8WTT2 800 aaKnown RBP16.16■□□□□ 0.18
CACNB3-220ENST00000551716 SNX19Q92543 992 aa16.16■□□□□ 0.18
CACNB3-220ENST00000551716 KLF16Q9BXK1 252 aaPredicted RBP16.16■□□□□ 0.18
CACNB3-220ENST00000551716 FBXO44Q9H4M3 255 aa16.16■□□□□ 0.18
CACNB3-220ENST00000551716 TLR8Q9NR97 1041 aaKnown RBP16.16■□□□□ 0.18
CACNB3-220ENST00000551716 TMEM30AQ9NV96 361 aa16.16■□□□□ 0.18
CACNB3-220ENST00000551716 TIMM44O43615 452 aa16.15■□□□□ 0.18
CACNB3-220ENST00000551716 GCNT3O95395 438 aa16.15■□□□□ 0.18
CACNB3-220ENST00000551716 BMP15O95972 392 aa16.15■□□□□ 0.18
CACNB3-220ENST00000551716 ACTN2P35609 894 aa16.15■□□□□ 0.18
CACNB3-220ENST00000551716 TNNC1P63316 161 aa16.15■□□□□ 0.18
CACNB3-220ENST00000551716 KCNC4Q03721 635 aa16.15■□□□□ 0.18
CACNB3-220ENST00000551716 WDR49Q8IV35 697 aa16.15■□□□□ 0.18
CACNB3-220ENST00000551716 OR5B17Q8NGF7 314 aa16.15■□□□□ 0.18
CACNB3-220ENST00000551716 WBP2Q969T9 261 aa16.15■□□□□ 0.18
CACNB3-220ENST00000551716 SKA1Q96BD8 255 aa16.15■□□□□ 0.18
CACNB3-220ENST00000551716 KCNK16Q96T55 309 aa16.15■□□□□ 0.18
CACNB3-220ENST00000551716 CBWD1Q9BRT8 395 aa16.15■□□□□ 0.18
CACNB3-220ENST00000551716 KIAA1586Q9HCI6 787 aa16.15■□□□□ 0.18
CACNB3-220ENST00000551716 TM9SF3Q9HD45 589 aa16.15■□□□□ 0.18
CACNB3-220ENST00000551716 DMAP1Q9NPF5 467 aaPredicted RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms