RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 ENGASEQ8NFI3 743 aa15.32■□□□□ 0.04
VPS29-209ENST00000551655 TTC9Q92623 222 aa15.32■□□□□ 0.04
VPS29-209ENST00000551655 FBXO32Q969P5 355 aa15.32■□□□□ 0.04
VPS29-209ENST00000551655 SAAL1Q96ER3 474 aa15.32■□□□□ 0.04
VPS29-209ENST00000551655 CNDP2Q96KP4 475 aaKnown RBP15.32■□□□□ 0.04
VPS29-209ENST00000551655 C8orf48Q96LL4 319 aa15.32■□□□□ 0.04
VPS29-209ENST00000551655 XPO6Q96QU8 1125 aaKnown RBP15.32■□□□□ 0.04
VPS29-209ENST00000551655 FAM213AQ9BRX8 229 aa15.32■□□□□ 0.04
VPS29-209ENST00000551655 ZNF518BQ9C0D4 1074 aa15.32■□□□□ 0.04
VPS29-209ENST00000551655 FOXP1Q9H334 677 aaPredicted RBP15.32■□□□□ 0.04
VPS29-209ENST00000551655 PCDHGA1Q9Y5H4 931 aa15.32■□□□□ 0.04
VPS29-209ENST00000551655 STYXL1Q9Y6J8 313 aa15.32■□□□□ 0.04
VPS29-209ENST00000551655 CKAP5Q14008 2032 aa15.31■□□□□ 0.04
VPS29-209ENST00000551655 CLDN5O00501 218 aa15.31■□□□□ 0.04
VPS29-209ENST00000551655 GREM1O60565 184 aa15.31■□□□□ 0.04
VPS29-209ENST00000551655 OXTRP30559 389 aa15.31■□□□□ 0.04
VPS29-209ENST00000551655 ACSL1P33121 698 aa15.31■□□□□ 0.04
VPS29-209ENST00000551655 CTSKP43235 329 aa15.31■□□□□ 0.04
VPS29-209ENST00000551655 PGFP49763 221 aa15.31■□□□□ 0.04
VPS29-209ENST00000551655 GTF2BQ00403 316 aa15.31■□□□□ 0.04
VPS29-209ENST00000551655 TBC1D25Q3MII6 688 aa15.31■□□□□ 0.04
VPS29-209ENST00000551655 HECTD3Q5T447 861 aa15.31■□□□□ 0.04
VPS29-209ENST00000551655 SCAMP5Q8TAC9 235 aa15.31■□□□□ 0.04
VPS29-209ENST00000551655 MYCBPAPQ8TBZ2 947 aa15.31■□□□□ 0.04
VPS29-209ENST00000551655 POMGNT1Q8WZA1 660 aa15.31■□□□□ 0.04
VPS29-209ENST00000551655 PRCCQ92733 491 aaPredicted RBP15.31■□□□□ 0.04
VPS29-209ENST00000551655 WBP1Q96G27 269 aa15.31■□□□□ 0.04
VPS29-209ENST00000551655 C8orf76Q96K31 380 aa15.31■□□□□ 0.04
VPS29-209ENST00000551655 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.31■□□□□ 0.04
VPS29-209ENST00000551655 NUP58Q9BVL2 599 aa15.31■□□□□ 0.04
VPS29-209ENST00000551655 MTMR12Q9C0I1 747 aa15.31■□□□□ 0.04
VPS29-209ENST00000551655 EHD2Q9NZN4 543 aa15.31■□□□□ 0.04
VPS29-209ENST00000551655 KCND2Q9NZV8 630 aa15.31■□□□□ 0.04
VPS29-209ENST00000551655 ODF2LQ9ULJ1 636 aa15.31■□□□□ 0.04
VPS29-209ENST00000551655 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.31■□□□□ 0.04
VPS29-209ENST00000551655 DOPEY2Q9Y3R5 2298 aa15.31■□□□□ 0.04
VPS29-209ENST00000551655 LDOC1O95751 146 aaPredicted RBP15.3■□□□□ 0.04
VPS29-209ENST00000551655 IGLV3-19P01714 112 aa15.3■□□□□ 0.04
VPS29-209ENST00000551655 PRKCHP24723 683 aa15.3■□□□□ 0.04
VPS29-209ENST00000551655 YWHAQP27348 245 aa15.3■□□□□ 0.04
VPS29-209ENST00000551655 ACTN2P35609 894 aa15.3■□□□□ 0.04
VPS29-209ENST00000551655 GRIA4P48058 902 aa15.3■□□□□ 0.04
VPS29-209ENST00000551655 ZNF131P52739 623 aa15.3■□□□□ 0.04
VPS29-209ENST00000551655 PTPRJQ12913 1337 aa15.3■□□□□ 0.04
VPS29-209ENST00000551655 TEAD4Q15561 434 aa15.3■□□□□ 0.04
VPS29-209ENST00000551655 TMEM119Q4V9L6 283 aa15.3■□□□□ 0.04
VPS29-209ENST00000551655 PKDCCQ504Y2 493 aa15.3■□□□□ 0.04
VPS29-209ENST00000551655 DTHD1Q6ZMT9 781 aa15.3■□□□□ 0.04
VPS29-209ENST00000551655 CEP295NLQ96MC4 621 aa15.3■□□□□ 0.04
VPS29-209ENST00000551655 MRPL45Q9BRJ2 306 aaKnown RBP15.3■□□□□ 0.04
VPS29-209ENST00000551655 DPEP3Q9H4B8 488 aa15.3■□□□□ 0.04
VPS29-209ENST00000551655 PARVGQ9HBI0 331 aa15.3■□□□□ 0.04
VPS29-209ENST00000551655 NOL7Q9UMY1 257 aaKnown RBP15.3■□□□□ 0.04
VPS29-209ENST00000551655 A0A1B0GTQ1 180 aa15.29■□□□□ 0.04
VPS29-209ENST00000551655 GOLGA8IPA6NC78 632 aa15.29■□□□□ 0.04
VPS29-209ENST00000551655 GOLGA8JA6NMD2 632 aa15.29■□□□□ 0.04
VPS29-209ENST00000551655 ACADMP11310 421 aa15.29■□□□□ 0.04
VPS29-209ENST00000551655 TRAPPC10P48553 1259 aa15.29■□□□□ 0.04
VPS29-209ENST00000551655 CSRP3P50461 194 aa15.29■□□□□ 0.04
VPS29-209ENST00000551655 TMPRSS3P57727 454 aa15.29■□□□□ 0.04
VPS29-209ENST00000551655 RBP5P82980 135 aa15.29■□□□□ 0.04
VPS29-209ENST00000551655 GNL2Q13823 731 aaKnown RBP15.29■□□□□ 0.04
VPS29-209ENST00000551655 SHBQ15464 509 aa15.29■□□□□ 0.04
VPS29-209ENST00000551655 GEN1Q17RS7 908 aa15.29■□□□□ 0.04
VPS29-209ENST00000551655 INAVAQ3KP66 663 aa15.29■□□□□ 0.04
VPS29-209ENST00000551655 SLFN12LQ6IEE8 588 aa15.29■□□□□ 0.04
VPS29-209ENST00000551655 LIMS2Q7Z4I7 341 aa15.29■□□□□ 0.04
VPS29-209ENST00000551655 NT5DC4Q86YG4 428 aa15.29■□□□□ 0.04
VPS29-209ENST00000551655 BRSK2Q8IWQ3 736 aa15.29■□□□□ 0.04
VPS29-209ENST00000551655 EID2Q8N6I1 236 aa15.29■□□□□ 0.04
VPS29-209ENST00000551655 SORCS1Q8WY21 1168 aa15.29■□□□□ 0.04
VPS29-209ENST00000551655 BIRC7Q96CA5 298 aa15.29■□□□□ 0.04
VPS29-209ENST00000551655 THAP10Q9P2Z0 257 aaPredicted RBP15.29■□□□□ 0.04
VPS29-209ENST00000551655 ITGA11Q9UKX5 1188 aa15.29■□□□□ 0.04
VPS29-209ENST00000551655 FLNCQ14315 2725 aa15.28■□□□□ 0.04
VPS29-209ENST00000551655 FSBPO95073 299 aa15.28■□□□□ 0.04
VPS29-209ENST00000551655 TBX18O95935 607 aa15.28■□□□□ 0.04
VPS29-209ENST00000551655 WARSP23381 471 aaKnown RBP15.28■□□□□ 0.04
VPS29-209ENST00000551655 KCNA1Q09470 495 aa15.28■□□□□ 0.04
VPS29-209ENST00000551655 MAPRE1Q15691 268 aaKnown RBP15.28■□□□□ 0.04
VPS29-209ENST00000551655 KIAA1614Q5VZ46 1190 aa15.28■□□□□ 0.04
VPS29-209ENST00000551655 ADAT2Q7Z6V5 191 aaKnown RBP15.28■□□□□ 0.04
VPS29-209ENST00000551655 NUP93Q8N1F7 819 aa15.28■□□□□ 0.04
VPS29-209ENST00000551655 NOC3LQ8WTT2 800 aaKnown RBP15.28■□□□□ 0.04
VPS29-209ENST00000551655 CDK5RAP3Q96JB5 506 aa15.28■□□□□ 0.04
VPS29-209ENST00000551655 KCNK16Q96T55 309 aa15.28■□□□□ 0.04
VPS29-209ENST00000551655 ORAI3Q9BRQ5 295 aa15.28■□□□□ 0.04
VPS29-209ENST00000551655 B3GNT5Q9BYG0 378 aa15.28■□□□□ 0.04
VPS29-209ENST00000551655 NACA2Q9H009 215 aa15.28■□□□□ 0.04
VPS29-209ENST00000551655 PDE11AQ9HCR9 933 aa15.28■□□□□ 0.04
VPS29-209ENST00000551655 RBAKQ9NYW8 714 aaPredicted RBP15.28■□□□□ 0.04
VPS29-209ENST00000551655 MARK1Q9P0L2 795 aa15.28■□□□□ 0.04
VPS29-209ENST00000551655 IL17BQ9UHF5 180 aa15.28■□□□□ 0.04
VPS29-209ENST00000551655 PAPSS1O43252 624 aaPredicted RBP15.27■□□□□ 0.04
VPS29-209ENST00000551655 SYNCRIPO60506 623 aaKnown RBP15.27■□□□□ 0.04
VPS29-209ENST00000551655 GLDCP23378 1020 aa15.27■□□□□ 0.04
VPS29-209ENST00000551655 PRPHP41219 470 aa15.27■□□□□ 0.04
VPS29-209ENST00000551655 ENPP2Q13822 863 aa15.27■□□□□ 0.04
VPS29-209ENST00000551655 ZNF234Q14588 700 aa15.27■□□□□ 0.04
VPS29-209ENST00000551655 ANKRD1Q15327 319 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms