RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 GPR15P49685 360 aa20.51■□□□□ 0.87
SSH1-209ENST00000551165 PDK2Q15119 407 aa20.51■□□□□ 0.87
SSH1-209ENST00000551165 ALS2CLQ60I27 953 aa20.51■□□□□ 0.87
SSH1-209ENST00000551165 RHBDF2Q6PJF5 856 aa20.51■□□□□ 0.87
SSH1-209ENST00000551165 TTC9BQ8N6N2 239 aa20.51■□□□□ 0.87
SSH1-209ENST00000551165 PAWRQ96IZ0 340 aaKnown RBP20.51■□□□□ 0.87
SSH1-209ENST00000551165 WHRNQ9P202 907 aa20.51■□□□□ 0.87
SSH1-209ENST00000551165 MFHAS1Q9Y4C4 1052 aa20.51■□□□□ 0.87
SSH1-209ENST00000551165 KIAA0100Q14667 2235 aaKnown RBP20.51■□□□□ 0.87
SSH1-209ENST00000551165 SGK1O00141 431 aa20.5■□□□□ 0.87
SSH1-209ENST00000551165 CAPN9O14815 690 aa20.5■□□□□ 0.87
SSH1-209ENST00000551165 IFNB1P01574 187 aa20.5■□□□□ 0.87
SSH1-209ENST00000551165 LTFP02788 710 aa20.5■□□□□ 0.87
SSH1-209ENST00000551165 ITGAVP06756 1048 aa20.5■□□□□ 0.87
SSH1-209ENST00000551165 GALTP07902 379 aa20.5■□□□□ 0.87
SSH1-209ENST00000551165 CALCOCO2Q13137 446 aa20.5■□□□□ 0.87
SSH1-209ENST00000551165 DPYSL2Q16555 572 aa20.5■□□□□ 0.87
SSH1-209ENST00000551165 LRRC26Q2I0M4 334 aa20.5■□□□□ 0.87
SSH1-209ENST00000551165 RSPO2Q6UXX9 243 aaPredicted RBP20.5■□□□□ 0.87
SSH1-209ENST00000551165 ZC3H18Q86VM9 953 aaKnown RBP20.5■□□□□ 0.87
SSH1-209ENST00000551165 UNC45BQ8IWX7 931 aa20.5■□□□□ 0.87
SSH1-209ENST00000551165 CCDC33Q8N5R6 958 aa20.5■□□□□ 0.87
SSH1-209ENST00000551165 ARL8AQ96BM9 186 aa20.5■□□□□ 0.87
SSH1-209ENST00000551165 LRRC45Q96CN5 670 aa20.5■□□□□ 0.87
SSH1-209ENST00000551165 FNDC1Q4ZHG4 1894 aaPredicted RBP20.5■□□□□ 0.87
SSH1-209ENST00000551165 H0YGN5 161 aa20.5■□□□□ 0.87
SSH1-209ENST00000551165 DESP17661 470 aa20.5■□□□□ 0.87
SSH1-209ENST00000551165 GRIK1P39086 918 aa20.5■□□□□ 0.87
SSH1-209ENST00000551165 EIF3EP60228 445 aaKnown RBP20.5■□□□□ 0.87
SSH1-209ENST00000551165 GPS2Q13227 327 aa20.5■□□□□ 0.87
SSH1-209ENST00000551165 P3H1Q32P28 736 aa20.5■□□□□ 0.87
SSH1-209ENST00000551165 MAP7D3Q8IWC1 876 aa20.5■□□□□ 0.87
SSH1-209ENST00000551165 FAM71BQ8TC56 605 aa20.5■□□□□ 0.87
SSH1-209ENST00000551165 ADAM7Q9H2U9 754 aa20.5■□□□□ 0.87
SSH1-209ENST00000551165 TMEM39AQ9NV64 488 aa20.5■□□□□ 0.87
SSH1-209ENST00000551165 FZD10Q9ULW2 581 aa20.5■□□□□ 0.87
SSH1-209ENST00000551165 NFS1Q9Y697 457 aa20.5■□□□□ 0.87
SSH1-209ENST00000551165 ARHGEF37A1IGU5 675 aa20.49■□□□□ 0.87
SSH1-209ENST00000551165 TRAPPC3O43617 180 aa20.49■□□□□ 0.87
SSH1-209ENST00000551165 CAPN15O75808 1086 aa20.49■□□□□ 0.87
SSH1-209ENST00000551165 ITIH2P19823 946 aa20.49■□□□□ 0.87
SSH1-209ENST00000551165 DEUP1Q05D60 604 aa20.49■□□□□ 0.87
SSH1-209ENST00000551165 MAPRE1Q15691 268 aaKnown RBP20.49■□□□□ 0.87
SSH1-209ENST00000551165 IZUMO3Q5VZ72 239 aa20.49■□□□□ 0.87
SSH1-209ENST00000551165 PM20D1Q6GTS8 502 aa20.49■□□□□ 0.87
SSH1-209ENST00000551165 CCDC25Q86WR0 208 aa20.49■□□□□ 0.87
SSH1-209ENST00000551165 SCN4BQ8IWT1 228 aa20.49■□□□□ 0.87
SSH1-209ENST00000551165 TAB3Q8N5C8 712 aaPredicted RBP20.49■□□□□ 0.87
SSH1-209ENST00000551165 DNAJC5GQ8N7S2 189 aa20.49■□□□□ 0.87
SSH1-209ENST00000551165 SEMA4AQ9H3S1 761 aa20.49■□□□□ 0.87
SSH1-209ENST00000551165 ETNK2Q9NVF9 386 aa20.49■□□□□ 0.87
SSH1-209ENST00000551165 CWC15Q9P013 229 aaKnown RBP20.49■□□□□ 0.87
SSH1-209ENST00000551165 HEY1Q9Y5J3 304 aa20.49■□□□□ 0.87
SSH1-209ENST00000551165 USP3Q9Y6I4 520 aa20.49■□□□□ 0.87
SSH1-209ENST00000551165 MICAL3Q7RTP6 2002 aa20.49■□□□□ 0.87
SSH1-209ENST00000551165 ZNF638Q14966 1978 aaKnown RBP20.49■□□□□ 0.87
SSH1-209ENST00000551165 TNFRSF10BO14763 440 aa20.49■□□□□ 0.87
SSH1-209ENST00000551165 RNF40O75150 1001 aa20.49■□□□□ 0.87
SSH1-209ENST00000551165 GOT1P17174 413 aa20.49■□□□□ 0.87
SSH1-209ENST00000551165 ARPP19P56211 112 aa20.49■□□□□ 0.87
SSH1-209ENST00000551165 CTXN3Q4LDR2 81 aa20.49■□□□□ 0.87
SSH1-209ENST00000551165 HSP90B2PQ58FF3 399 aa20.49■□□□□ 0.87
SSH1-209ENST00000551165 RTP2Q5QGT7 225 aa20.49■□□□□ 0.87
SSH1-209ENST00000551165 CCDC89Q8N998 374 aa20.49■□□□□ 0.87
SSH1-209ENST00000551165 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.49■□□□□ 0.87
SSH1-209ENST00000551165 SH3GL2Q99962 352 aa20.49■□□□□ 0.87
SSH1-209ENST00000551165 VPS18Q9P253 973 aa20.49■□□□□ 0.87
SSH1-209ENST00000551165 ANAPC5Q9UJX4 755 aa20.49■□□□□ 0.87
SSH1-209ENST00000551165 RBP3P10745 1247 aa20.48■□□□□ 0.87
SSH1-209ENST00000551165 RDXP35241 583 aaKnown RBP20.48■□□□□ 0.87
SSH1-209ENST00000551165 SLC5A3P53794 718 aa20.48■□□□□ 0.87
SSH1-209ENST00000551165 GPS1Q13098 491 aa20.48■□□□□ 0.87
SSH1-209ENST00000551165 MRPL58Q14197 206 aaKnown RBP20.48■□□□□ 0.87
SSH1-209ENST00000551165 DDR2Q16832 855 aa20.48■□□□□ 0.87
SSH1-209ENST00000551165 BSPRYQ5W0U4 402 aa20.48■□□□□ 0.87
SSH1-209ENST00000551165 SLC9A4Q6AI14 798 aa20.48■□□□□ 0.87
SSH1-209ENST00000551165 FUT10Q6P4F1 479 aa20.48■□□□□ 0.87
SSH1-209ENST00000551165 FBXO46Q6PJ61 603 aaPredicted RBP20.48■□□□□ 0.87
SSH1-209ENST00000551165 TTC13Q8NBP0 860 aa20.48■□□□□ 0.87
SSH1-209ENST00000551165 ATAD1Q8NBU5 361 aa20.48■□□□□ 0.87
SSH1-209ENST00000551165 NETO2Q8NC67 525 aa20.48■□□□□ 0.87
SSH1-209ENST00000551165 P3H4Q92791 437 aa20.48■□□□□ 0.87
SSH1-209ENST00000551165 FAF2Q96CS3 445 aa20.48■□□□□ 0.87
SSH1-209ENST00000551165 WDR6Q9NNW5 1121 aaKnown RBP20.48■□□□□ 0.87
SSH1-209ENST00000551165 MED4Q9NPJ6 270 aa20.48■□□□□ 0.87
SSH1-209ENST00000551165 STAP1Q9ULZ2 295 aa20.48■□□□□ 0.87
SSH1-209ENST00000551165 SOAT2O75908 522 aa20.48■□□□□ 0.87
SSH1-209ENST00000551165 PMS2P54278 862 aa20.48■□□□□ 0.87
SSH1-209ENST00000551165 LMNB2Q03252 620 aa20.48■□□□□ 0.87
SSH1-209ENST00000551165 NOMO1Q15155 1222 aa20.48■□□□□ 0.87
SSH1-209ENST00000551165 C1orf53Q5VUE5 145 aa20.48■□□□□ 0.87
SSH1-209ENST00000551165 C4orf50Q6ZRC1 276 aa20.48■□□□□ 0.87
SSH1-209ENST00000551165 FAM71DQ8N9W8 422 aa20.48■□□□□ 0.87
SSH1-209ENST00000551165 GPR152Q8TDT2 470 aa20.48■□□□□ 0.87
SSH1-209ENST00000551165 CSPG4P5Q96PW8 444 aa20.48■□□□□ 0.87
SSH1-209ENST00000551165 NCAPGQ9BPX3 1015 aa20.48■□□□□ 0.87
SSH1-209ENST00000551165 ZNF670Q9BS34 389 aa20.48■□□□□ 0.87
SSH1-209ENST00000551165 COLEC11Q9BWP8 271 aa20.48■□□□□ 0.87
SSH1-209ENST00000551165 SYN3O14994 580 aa20.47■□□□□ 0.87
SSH1-209ENST00000551165 FGFR3P22607 806 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms