RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 GRIN3AQ8TCU5 1115 aa12.53□□□□□ -0.4
VDR-208ENST00000550325 THAP11Q96EK4 314 aa12.53□□□□□ -0.4
VDR-208ENST00000550325 SENP6Q9GZR1 1112 aaPredicted RBP12.53□□□□□ -0.4
VDR-208ENST00000550325 TUT1Q9H6E5 874 aaKnown RBP12.53□□□□□ -0.4
VDR-208ENST00000550325 KCND2Q9NZV8 630 aa12.53□□□□□ -0.4
VDR-208ENST00000550325 TBC1D30Q9Y2I9 924 aa12.53□□□□□ -0.4
VDR-208ENST00000550325 KCNN4O15554 427 aa12.52□□□□□ -0.4
VDR-208ENST00000550325 CCNT2O60583 730 aaKnown RBP12.52□□□□□ -0.4
VDR-208ENST00000550325 ALOX15P16050 662 aaPredicted RBP12.52□□□□□ -0.4
VDR-208ENST00000550325 ZFXP17010 805 aaPredicted RBP12.52□□□□□ -0.4
VDR-208ENST00000550325 MTA1Q13330 715 aa12.52□□□□□ -0.4
VDR-208ENST00000550325 TAF5Q15542 800 aa12.52□□□□□ -0.4
VDR-208ENST00000550325 CDO1Q16878 200 aa12.52□□□□□ -0.4
VDR-208ENST00000550325 N4BP2L1Q5TBK1 243 aaPredicted RBP12.52□□□□□ -0.4
VDR-208ENST00000550325 CDC42EP5Q6NZY7 148 aa12.52□□□□□ -0.4
VDR-208ENST00000550325 TATDN1Q6P1N9 297 aa12.52□□□□□ -0.4
VDR-208ENST00000550325 SMYD1Q8NB12 490 aa12.52□□□□□ -0.4
VDR-208ENST00000550325 RIN3Q8TB24 985 aa12.52□□□□□ -0.4
VDR-208ENST00000550325 DDI1Q8WTU0 396 aa12.52□□□□□ -0.4
VDR-208ENST00000550325 NKD2Q969F2 451 aaPredicted RBP12.52□□□□□ -0.4
VDR-208ENST00000550325 PPWD1Q96BP3 646 aaKnown RBP12.52□□□□□ -0.4
VDR-208ENST00000550325 TMA16Q96EY4 203 aaKnown RBP12.52□□□□□ -0.4
VDR-208ENST00000550325 ZNF512Q96ME7 567 aaPredicted RBP12.52□□□□□ -0.4
VDR-208ENST00000550325 DHRS4Q9BTZ2 278 aa12.52□□□□□ -0.4
VDR-208ENST00000550325 TRPV6Q9H1D0 765 aa12.52□□□□□ -0.4
VDR-208ENST00000550325 PSMD13Q9UNM6 376 aa12.52□□□□□ -0.4
VDR-208ENST00000550325 TSC22D4Q9Y3Q8 395 aa12.52□□□□□ -0.4
VDR-208ENST00000550325 NAV1Q8NEY1 1877 aa12.52□□□□□ -0.41
VDR-208ENST00000550325 RBM47A0AV96 593 aaKnown RBP12.52□□□□□ -0.41
VDR-208ENST00000550325 AOC1P19801 751 aa12.52□□□□□ -0.41
VDR-208ENST00000550325 RPL10P27635 214 aaKnown RBP12.52□□□□□ -0.41
VDR-208ENST00000550325 LIG4P49917 911 aa12.52□□□□□ -0.41
VDR-208ENST00000550325 XIAPP98170 497 aa12.52□□□□□ -0.41
VDR-208ENST00000550325 CDKL1Q00532 357 aa12.52□□□□□ -0.41
VDR-208ENST00000550325 ROR1Q01973 937 aa12.52□□□□□ -0.41
VDR-208ENST00000550325 MMRN1Q13201 1228 aa12.52□□□□□ -0.41
VDR-208ENST00000550325 HADHQ16836 314 aaKnown RBP12.52□□□□□ -0.41
VDR-208ENST00000550325 ABCB5Q2M3G0 1257 aa12.52□□□□□ -0.41
VDR-208ENST00000550325 PLEKHA7Q6IQ23 1121 aa12.52□□□□□ -0.41
VDR-208ENST00000550325 TRMT10BQ6PF06 316 aaKnown RBP12.52□□□□□ -0.41
VDR-208ENST00000550325 ADGRG6Q86SQ4 1221 aa12.52□□□□□ -0.41
VDR-208ENST00000550325 CDCA7Q9BWT1 371 aaPredicted RBP12.52□□□□□ -0.41
VDR-208ENST00000550325 EHMT1Q9H9B1 1298 aa12.52□□□□□ -0.41
VDR-208ENST00000550325 TUBGCP4Q9UGJ1 667 aa12.52□□□□□ -0.41
VDR-208ENST00000550325 DDX60LQ5H9U9 1706 aaKnown RBP12.52□□□□□ -0.41
VDR-208ENST00000550325 ABCA3Q99758 1704 aa12.52□□□□□ -0.41
VDR-208ENST00000550325 CSH1P0DML2 217 aa12.52□□□□□ -0.41
VDR-208ENST00000550325 CSH2P0DML3 217 aa12.52□□□□□ -0.41
VDR-208ENST00000550325 NPTX2P47972 431 aa12.52□□□□□ -0.41
VDR-208ENST00000550325 SLC5A3P53794 718 aa12.52□□□□□ -0.41
VDR-208ENST00000550325 EMP3P54852 163 aa12.52□□□□□ -0.41
VDR-208ENST00000550325 GCNT1Q02742 428 aa12.52□□□□□ -0.41
VDR-208ENST00000550325 WASHC5Q12768 1159 aa12.52□□□□□ -0.41
VDR-208ENST00000550325 ZNF772Q68DY9 489 aaPredicted RBP12.52□□□□□ -0.41
VDR-208ENST00000550325 FASTKD5Q7L8L6 764 aaKnown RBP12.52□□□□□ -0.41
VDR-208ENST00000550325 GPD1LQ8N335 351 aa12.52□□□□□ -0.41
VDR-208ENST00000550325 TFB1MQ8WVM0 346 aaKnown RBP12.52□□□□□ -0.41
VDR-208ENST00000550325 CCDC17Q96LX7 622 aa12.52□□□□□ -0.41
VDR-208ENST00000550325 HAUS8Q9BT25 410 aa12.52□□□□□ -0.41
VDR-208ENST00000550325 C1orf21Q9H246 121 aa12.52□□□□□ -0.41
VDR-208ENST00000550325 PCDH18Q9HCL0 1135 aa12.52□□□□□ -0.41
VDR-208ENST00000550325 MAGED2Q9UNF1 606 aaPredicted RBP12.52□□□□□ -0.41
VDR-208ENST00000550325 SCN7AQ01118 1682 aa12.51□□□□□ -0.41
VDR-208ENST00000550325 ARFGEF1Q9Y6D6 1849 aa12.51□□□□□ -0.41
VDR-208ENST00000550325 HSPA4LO95757 839 aa12.51□□□□□ -0.41
VDR-208ENST00000550325 COX4I1P13073 169 aa12.51□□□□□ -0.41
VDR-208ENST00000550325 CDH2P19022 906 aaPredicted RBP12.51□□□□□ -0.41
VDR-208ENST00000550325 OSBPP22059 807 aa12.51□□□□□ -0.41
VDR-208ENST00000550325 QARSP47897 775 aaKnown RBP12.51□□□□□ -0.41
VDR-208ENST00000550325 TMED10P49755 219 aaKnown RBP12.51□□□□□ -0.41
VDR-208ENST00000550325 SCYL2Q6P3W7 929 aa12.51□□□□□ -0.41
VDR-208ENST00000550325 ENOSF1Q7L5Y1 443 aa12.51□□□□□ -0.41
VDR-208ENST00000550325 CPXCR1Q8N123 301 aa12.51□□□□□ -0.41
VDR-208ENST00000550325 MARVELD2Q8N4S9 558 aa12.51□□□□□ -0.41
VDR-208ENST00000550325 TTLL6Q8N841 843 aa12.51□□□□□ -0.41
VDR-208ENST00000550325 SLC35B2Q8TB61 432 aa12.51□□□□□ -0.41
VDR-208ENST00000550325 DIS3LQ8TF46 1054 aaKnown RBP12.51□□□□□ -0.41
VDR-208ENST00000550325 ZNF606Q8WXB4 792 aa12.51□□□□□ -0.41
VDR-208ENST00000550325 FAM163AQ96GL9 167 aaPredicted RBP12.51□□□□□ -0.41
VDR-208ENST00000550325 MARK4Q96L34 752 aa12.51□□□□□ -0.41
VDR-208ENST00000550325 ARHGEF37A1IGU5 675 aa12.51□□□□□ -0.41
VDR-208ENST00000550325 TMEM191CA6NGB0 347 aa12.51□□□□□ -0.41
VDR-208ENST00000550325 GIPC1O14908 333 aa12.51□□□□□ -0.41
VDR-208ENST00000550325 CASQ2O14958 399 aaPredicted RBP12.51□□□□□ -0.41
VDR-208ENST00000550325 TMEM191BP0C7N4 346 aa12.51□□□□□ -0.41
VDR-208ENST00000550325 CUL2Q13617 745 aa12.51□□□□□ -0.41
VDR-208ENST00000550325 SNX32Q86XE0 403 aa12.51□□□□□ -0.41
VDR-208ENST00000550325 UNC5BQ8IZJ1 945 aa12.51□□□□□ -0.41
VDR-208ENST00000550325 ACTRT2Q8TDY3 377 aa12.51□□□□□ -0.41
VDR-208ENST00000550325 MAML3Q96JK9 1138 aa12.51□□□□□ -0.41
VDR-208ENST00000550325 IMPG2Q9BZV3 1241 aa12.51□□□□□ -0.41
VDR-208ENST00000550325 DDX56Q9NY93 547 aaKnown RBP12.51□□□□□ -0.41
VDR-208ENST00000550325 RBMX2Q9Y388 322 aaKnown RBP12.51□□□□□ -0.41
VDR-208ENST00000550325 STX16-NPEPL1H3BU86 382 aa12.51□□□□□ -0.41
VDR-208ENST00000550325 SULT2A1Q06520 285 aa12.51□□□□□ -0.41
VDR-208ENST00000550325 ZNF252P-AS1Q0IIN9 211 aa12.51□□□□□ -0.41
VDR-208ENST00000550325 ORC1Q13415 861 aa12.51□□□□□ -0.41
VDR-208ENST00000550325 PRKG1Q13976 671 aa12.51□□□□□ -0.41
VDR-208ENST00000550325 PPM1LQ5SGD2 360 aa12.51□□□□□ -0.41
VDR-208ENST00000550325 MYO1HQ8N1T3 1032 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms