RNA–Protein interactions for RNA: ENST00000549220.5

EFCAB2-215, Transcript of EF-hand calcium binding domain 2, humanhuman

TSL 4

Gene EFCAB2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB2-215ENST00000549220 TRAPPC3O43617 180 aa6.31□□□□□ -1.4
EFCAB2-215ENST00000549220 CLASP2O75122 1294 aaKnown RBP6.31□□□□□ -1.4
EFCAB2-215ENST00000549220 TBX10O75333 385 aa6.31□□□□□ -1.4
EFCAB2-215ENST00000549220 CNPP09543 421 aaKnown RBP6.31□□□□□ -1.4
EFCAB2-215ENST00000549220 WEE2P0C1S8 567 aa6.31□□□□□ -1.4
EFCAB2-215ENST00000549220 TRIM49P0CI25 452 aa6.31□□□□□ -1.4
EFCAB2-215ENST00000549220 TRIM49CP0CI26 452 aa6.31□□□□□ -1.4
EFCAB2-215ENST00000549220 CTSAP10619 480 aa6.31□□□□□ -1.4
EFCAB2-215ENST00000549220 ERCC5P28715 1186 aaPredicted RBP6.31□□□□□ -1.4
EFCAB2-215ENST00000549220 CYP24A1Q07973 514 aa6.31□□□□□ -1.4
EFCAB2-215ENST00000549220 BIRC3Q13489 604 aa6.31□□□□□ -1.4
EFCAB2-215ENST00000549220 MPP2Q14168 576 aa6.31□□□□□ -1.4
EFCAB2-215ENST00000549220 DUSP6Q16828 381 aa6.31□□□□□ -1.4
EFCAB2-215ENST00000549220 BMT2Q1RMZ1 405 aa6.31□□□□□ -1.4
EFCAB2-215ENST00000549220 XKR4Q5GH76 650 aa6.31□□□□□ -1.4
EFCAB2-215ENST00000549220 RARS2Q5T160 578 aaKnown RBP6.31□□□□□ -1.4
EFCAB2-215ENST00000549220 TCERG1LQ5VWI1 586 aa6.31□□□□□ -1.4
EFCAB2-215ENST00000549220 SPATA1Q5VX52 437 aa6.31□□□□□ -1.4
EFCAB2-215ENST00000549220 C9orf57Q5W0N0 161 aa6.31□□□□□ -1.4
EFCAB2-215ENST00000549220 DCLRE1AQ6PJP8 1040 aa6.31□□□□□ -1.4
EFCAB2-215ENST00000549220 ATG14Q6ZNE5 492 aa6.31□□□□□ -1.4
EFCAB2-215ENST00000549220 TTLL10Q6ZVT0 673 aa6.31□□□□□ -1.4
EFCAB2-215ENST00000549220 USP37Q86T82 979 aa6.31□□□□□ -1.4
EFCAB2-215ENST00000549220 CD302Q8IX05 232 aa6.31□□□□□ -1.4
EFCAB2-215ENST00000549220 GUF1Q8N442 669 aaKnown RBP6.31□□□□□ -1.4
EFCAB2-215ENST00000549220 C12orf76Q8N812 135 aaPredicted RBP6.31□□□□□ -1.4
EFCAB2-215ENST00000549220 MRPL43Q8N983 215 aaKnown RBP6.31□□□□□ -1.4
EFCAB2-215ENST00000549220 OR5B17Q8NGF7 314 aa6.31□□□□□ -1.4
EFCAB2-215ENST00000549220 GOLGA5Q8TBA6 731 aa6.31□□□□□ -1.4
EFCAB2-215ENST00000549220 GPT2Q8TD30 523 aa6.31□□□□□ -1.4
EFCAB2-215ENST00000549220 CACTINQ8WUQ7 758 aaKnown RBP6.31□□□□□ -1.4
EFCAB2-215ENST00000549220 RNF34Q969K3 372 aa6.31□□□□□ -1.4
EFCAB2-215ENST00000549220 TTPALQ9BTX7 342 aa6.31□□□□□ -1.4
EFCAB2-215ENST00000549220 ASPNQ9BXN1 380 aa6.31□□□□□ -1.4
EFCAB2-215ENST00000549220 HDAC8Q9BY41 377 aa6.31□□□□□ -1.4
EFCAB2-215ENST00000549220 KRTAP9-3Q9BYQ3 159 aa6.31□□□□□ -1.4
EFCAB2-215ENST00000549220 EPB41L4BQ9H329 900 aa6.31□□□□□ -1.4
EFCAB2-215ENST00000549220 KCTD10Q9H3F6 313 aa6.31□□□□□ -1.4
EFCAB2-215ENST00000549220 CLSTN2Q9H4D0 955 aa6.31□□□□□ -1.4
EFCAB2-215ENST00000549220 ASB7Q9H672 318 aa6.31□□□□□ -1.4
EFCAB2-215ENST00000549220 NGRNQ9NPE2 291 aaKnown RBP6.31□□□□□ -1.4
EFCAB2-215ENST00000549220 CDH22Q9UJ99 828 aa6.31□□□□□ -1.4
EFCAB2-215ENST00000549220 SMG5Q9UPR3 1016 aaKnown RBP6.31□□□□□ -1.4
EFCAB2-215ENST00000549220 FRMD4BQ9Y2L6 1034 aa6.31□□□□□ -1.4
EFCAB2-215ENST00000549220 NPIPB6E9PJ23 425 aa6.3□□□□□ -1.4
EFCAB2-215ENST00000549220 PDXKO00764 312 aa6.3□□□□□ -1.4
EFCAB2-215ENST00000549220 PSMA7O14818 248 aa6.3□□□□□ -1.4
EFCAB2-215ENST00000549220 RGS13O14921 159 aa6.3□□□□□ -1.4
EFCAB2-215ENST00000549220 KIAA0391O15091 583 aaKnown RBP6.3□□□□□ -1.4
EFCAB2-215ENST00000549220 TEX28O15482 410 aa6.3□□□□□ -1.4
EFCAB2-215ENST00000549220 ADAM12O43184 909 aa6.3□□□□□ -1.4
EFCAB2-215ENST00000549220 ATE1O95260 518 aa6.3□□□□□ -1.4
EFCAB2-215ENST00000549220 GLP2RO95838 553 aa6.3□□□□□ -1.4
EFCAB2-215ENST00000549220 OR4Q2P0C623 313 aa6.3□□□□□ -1.4
EFCAB2-215ENST00000549220 SRGAP2BP0DMP2 458 aa6.3□□□□□ -1.4
EFCAB2-215ENST00000549220 EPB41P11171 864 aaKnown RBP6.3□□□□□ -1.4
EFCAB2-215ENST00000549220 ODC1P11926 461 aa6.3□□□□□ -1.4
EFCAB2-215ENST00000549220 KRT13P13646 458 aa6.3□□□□□ -1.4
EFCAB2-215ENST00000549220 POU3F3P20264 500 aaPredicted RBP6.3□□□□□ -1.4
EFCAB2-215ENST00000549220 RPL9P32969 192 aaKnown RBP6.3□□□□□ -1.4
EFCAB2-215ENST00000549220 OR1D2P34982 312 aa6.3□□□□□ -1.4
EFCAB2-215ENST00000549220 TAF6P49848 677 aa6.3□□□□□ -1.4
EFCAB2-215ENST00000549220 PMS1P54277 932 aaKnown RBP6.3□□□□□ -1.4
EFCAB2-215ENST00000549220 DLG4P78352 724 aa6.3□□□□□ -1.4
EFCAB2-215ENST00000549220 DSG1Q02413 1049 aa6.3□□□□□ -1.4
EFCAB2-215ENST00000549220 ELAVL2Q12926 359 aaKnown RBP6.3□□□□□ -1.4
EFCAB2-215ENST00000549220 ADAM9Q13443 819 aa6.3□□□□□ -1.4
EFCAB2-215ENST00000549220 ADAM15Q13444 863 aa6.3□□□□□ -1.4
EFCAB2-215ENST00000549220 TRPC3Q13507 836 aa6.3□□□□□ -1.4
EFCAB2-215ENST00000549220 SURF1Q15526 300 aa6.3□□□□□ -1.4
EFCAB2-215ENST00000549220 TPD52L1Q16890 204 aaPredicted RBP6.3□□□□□ -1.4
EFCAB2-215ENST00000549220 SV2CQ496J9 727 aa6.3□□□□□ -1.4
EFCAB2-215ENST00000549220 CCDC40Q4G0X9 1142 aa6.3□□□□□ -1.4
EFCAB2-215ENST00000549220 CTXN3Q4LDR2 81 aa6.3□□□□□ -1.4
EFCAB2-215ENST00000549220 HSP90AA4PQ58FG1 418 aa6.3□□□□□ -1.4
EFCAB2-215ENST00000549220 DCAF17Q5H9S7 520 aaPredicted RBP6.3□□□□□ -1.4
EFCAB2-215ENST00000549220 ANKRD40Q6AI12 368 aa6.3□□□□□ -1.4
EFCAB2-215ENST00000549220 CD300LGQ6UXG3 332 aa6.3□□□□□ -1.4
EFCAB2-215ENST00000549220 SCARA5Q6ZMJ2 495 aa6.3□□□□□ -1.4
EFCAB2-215ENST00000549220 FAM186BQ8IYM0 893 aa6.3□□□□□ -1.4
EFCAB2-215ENST00000549220 EFHBQ8N7U6 833 aa6.3□□□□□ -1.4
EFCAB2-215ENST00000549220 GOLM1Q8NBJ4 401 aa6.3□□□□□ -1.4
EFCAB2-215ENST00000549220 VN1R2Q8NFZ6 395 aa6.3□□□□□ -1.4
EFCAB2-215ENST00000549220 NELFBQ8WX92 580 aa6.3□□□□□ -1.4
EFCAB2-215ENST00000549220 KCNN1Q92952 543 aa6.3□□□□□ -1.4
EFCAB2-215ENST00000549220 PABPC5Q96DU9 382 aaKnown RBP6.3□□□□□ -1.4
EFCAB2-215ENST00000549220 SENP8Q96LD8 212 aa6.3□□□□□ -1.4
EFCAB2-215ENST00000549220 CCDC74BQ96LY2 380 aa6.3□□□□□ -1.4
EFCAB2-215ENST00000549220 ZNF560Q96MR9 790 aa6.3□□□□□ -1.4
EFCAB2-215ENST00000549220 KLHL5Q96PQ7 755 aa6.3□□□□□ -1.4
EFCAB2-215ENST00000549220 CGRRF1Q99675 332 aa6.3□□□□□ -1.4
EFCAB2-215ENST00000549220 KIAA1586Q9HCI6 787 aa6.3□□□□□ -1.4
EFCAB2-215ENST00000549220 MAN1C1Q9NR34 630 aa6.3□□□□□ -1.4
EFCAB2-215ENST00000549220 INTS13Q9NVM9 706 aa6.3□□□□□ -1.4
EFCAB2-215ENST00000549220 CGNQ9P2M7 1197 aaKnown RBP6.3□□□□□ -1.4
EFCAB2-215ENST00000549220 SSX2IPQ9Y2D8 614 aa6.3□□□□□ -1.4
EFCAB2-215ENST00000549220 DERAQ9Y315 318 aa6.3□□□□□ -1.4
EFCAB2-215ENST00000549220 C2CD2Q9Y426 696 aa6.3□□□□□ -1.4
EFCAB2-215ENST00000549220 HCFC2Q9Y5Z7 792 aa6.3□□□□□ -1.4
EFCAB2-215ENST00000549220 CDY1Q9Y6F8 540 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms