RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 TAF6P49848 677 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 CTBSQ01459 385 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 RELAQ04206 551 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 DNAJC3Q13217 504 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 CLPPQ16740 277 aaPredicted RBP5.14□□□□□ -1.59
SCAF11-212ENST00000549162 FBXO38Q6PIJ6 1188 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 NCAPG2Q86XI2 1143 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 CCNJLQ8IV13 435 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 RCOR2Q8IZ40 523 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 MAB21L3Q8N8X9 362 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 HDAC11Q96DB2 347 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 C1QTNF3Q9BXJ4 246 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 XAB2Q9HCS7 855 aaKnown RBP5.14□□□□□ -1.59
SCAF11-212ENST00000549162 SIRT5Q9NXA8 310 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 KCTD5Q9NXV2 234 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 RBAKQ9NYW8 714 aaPredicted RBP5.14□□□□□ -1.59
SCAF11-212ENST00000549162 SCHIP1Q9P0W5 487 aaPredicted RBP5.14□□□□□ -1.59
SCAF11-212ENST00000549162 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.14□□□□□ -1.59
SCAF11-212ENST00000549162 PPT2Q9UMR5 302 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 TLR6Q9Y2C9 796 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 NUB1Q9Y5A7 615 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 PCDHA13Q9Y5I0 950 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 OR51B4Q9Y5P0 310 aa5.14□□□□□ -1.59
SCAF11-212ENST00000549162 LACTBL1A8MY62 500 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 ODC1P11926 461 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 KRT13P13646 458 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 CLCN2P51788 898 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 DCDC1P59894 354 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 GPC5P78333 572 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 CKAP4Q07065 602 aaKnown RBP5.13□□□□□ -1.59
SCAF11-212ENST00000549162 CUL1Q13616 776 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 UTP14CQ5TAP6 766 aaKnown RBP5.13□□□□□ -1.59
SCAF11-212ENST00000549162 ZNF765Q7L2R6 523 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 DEPTORQ8TB45 409 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 AENQ8WTP8 325 aaKnown RBP5.13□□□□□ -1.59
SCAF11-212ENST00000549162 FOXJ1Q92949 421 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 TTC17Q96AE7 1141 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 TNIP3Q96KP6 325 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 CBWD1Q9BRT8 395 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 PLEKHA4Q9H4M7 779 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 SLC2A4RGQ9NR83 387 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 PARVAQ9NVD7 372 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 TMEM248Q9NWD8 314 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 SMOXQ9NWM0 555 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 KLK14Q9P0G3 267 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 FOXD3Q9UJU5 478 aaPredicted RBP5.13□□□□□ -1.59
SCAF11-212ENST00000549162 FZD10Q9ULW2 581 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 CYP2C9P11712 490 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 NMT1P30419 496 aaKnown RBP5.13□□□□□ -1.59
SCAF11-212ENST00000549162 CYP2C19P33261 490 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 CCNFP41002 786 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 SLC25A52Q3SY17 297 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 HERC4Q5GLZ8 1057 aaPredicted RBP5.13□□□□□ -1.59
SCAF11-212ENST00000549162 WDR78Q5VTH9 848 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 PALB2Q86YC2 1186 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 ZNF280BQ86YH2 543 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 ARHGEF19Q8IW93 802 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 CEP112Q8N8E3 955 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 APPL2Q8NEU8 664 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 NEK11Q8NG66 645 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 MSLNLQ96KJ4 702 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 ZMAT2Q96NC0 199 aaKnown RBP5.13□□□□□ -1.59
SCAF11-212ENST00000549162 S1PR5Q9H228 398 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 RPF1Q9H9Y2 349 aaKnown RBP5.13□□□□□ -1.59
SCAF11-212ENST00000549162 MLXIPQ9HAP2 919 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 ZDHHC18Q9NUE0 388 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 MTMR10Q9NXD2 777 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.13□□□□□ -1.592e-7■□□□□ 10.3
SCAF11-212ENST00000549162 UXTQ9UBK9 157 aaPredicted RBP5.13□□□□□ -1.59
SCAF11-212ENST00000549162 AGO1Q9UL18 857 aaKnown RBP5.13□□□□□ -1.59
SCAF11-212ENST00000549162 LUC7L2Q9Y383 392 aaKnown RBP5.13□□□□□ -1.59
SCAF11-212ENST00000549162 CHURC1-FNTBB4DL54 471 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 SPAG6O75602 509 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 PCSK1P29120 753 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 KIF11P52732 1056 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 LILRA4P59901 499 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 GALNT2Q10471 571 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 CDC16Q13042 620 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 MAMLD1Q13495 774 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 DGKZQ13574 1117 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 TCEA2Q15560 299 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 DUSP6Q16828 381 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 SMU1Q2TAY7 513 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 USH1GQ495M9 461 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 EFHC1Q5JVL4 640 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 POTEHQ6S545 545 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 BNC2Q6ZN30 1099 aaPredicted RBP5.13□□□□□ -1.59
SCAF11-212ENST00000549162 TADA2BQ86TJ2 420 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 FAM160A2Q8N612 972 aaPredicted RBP5.13□□□□□ -1.59
SCAF11-212ENST00000549162 BBOF1Q8ND07 529 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 BCL7CQ8WUZ0 217 aaPredicted RBP5.13□□□□□ -1.59
SCAF11-212ENST00000549162 RIN2Q8WYP3 895 aaPredicted RBP5.13□□□□□ -1.59
SCAF11-212ENST00000549162 DNASE1L2Q92874 299 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 QKIQ96PU8 341 aaKnown RBP eCLIP5.13□□□□□ -1.59
SCAF11-212ENST00000549162 SMC6Q96SB8 1091 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 PCDHB18PQ96TA0 734 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 IL12RB2Q99665 862 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 TLR10Q9BXR5 811 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 CPVLQ9H3G5 476 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 NPHS2Q9NP85 383 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms