RNA–Protein interactions for RNA: ENST00000549078.5

KRT18-206, Transcript of keratin 18, humanhuman

TSL 5

Gene KRT18, Length 2,088 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-206ENST00000549078 RNF25Q96BH1 459 aaPredicted RBP20.22■□□□□ 0.83
KRT18-206ENST00000549078 COX16Q9P0S2 106 aa20.22■□□□□ 0.83
KRT18-206ENST00000549078 CTAGE15A4D2H0 777 aa20.21■□□□□ 0.83
KRT18-206ENST00000549078 H3BNC9 293 aa20.21■□□□□ 0.83
KRT18-206ENST00000549078 CTAGE8P0CG41 777 aa20.21■□□□□ 0.83
KRT18-206ENST00000549078 HMGA1P17096 107 aaKnown RBP20.21■□□□□ 0.83
KRT18-206ENST00000549078 TWF1Q12792 350 aa20.21■□□□□ 0.83
KRT18-206ENST00000549078 NME3Q13232 169 aa20.21■□□□□ 0.83
KRT18-206ENST00000549078 BOLA3Q53S33 107 aa20.21■□□□□ 0.83
KRT18-206ENST00000549078 CTAGE6Q86UF2 777 aa20.21■□□□□ 0.83
KRT18-206ENST00000549078 CTAGE4Q8IX94 777 aa20.21■□□□□ 0.83
KRT18-206ENST00000549078 ARHGAP18Q8N392 663 aa20.21■□□□□ 0.83
KRT18-206ENST00000549078 CMASQ8NFW8 434 aaPredicted RBP20.21■□□□□ 0.83
KRT18-206ENST00000549078 DQX1Q8TE96 717 aaKnown RBP20.21■□□□□ 0.83
KRT18-206ENST00000549078 HSPH1Q92598 858 aa20.21■□□□□ 0.83
KRT18-206ENST00000549078 PIGVQ9NUD9 493 aa20.21■□□□□ 0.83
KRT18-206ENST00000549078 RDXP35241 583 aaKnown RBP20.2■□□□□ 0.82
KRT18-206ENST00000549078 DEUP1Q05D60 604 aa20.2■□□□□ 0.82
KRT18-206ENST00000549078 FAM131BQ86XD5 332 aa20.2■□□□□ 0.82
KRT18-206ENST00000549078 CCDC50Q8IVM0 306 aa20.2■□□□□ 0.82
KRT18-206ENST00000549078 SPATA4Q8NEY3 305 aa20.2■□□□□ 0.82
KRT18-206ENST00000549078 MYRIPQ8NFW9 859 aa20.2■□□□□ 0.82
KRT18-206ENST00000549078 PGAP3Q96FM1 320 aaPredicted RBP20.2■□□□□ 0.82
KRT18-206ENST00000549078 SLITRK1Q96PX8 696 aa20.2■□□□□ 0.82
KRT18-206ENST00000549078 MSRAQ9UJ68 235 aa20.2■□□□□ 0.82
KRT18-206ENST00000549078 FBXW11Q9UKB1 542 aa20.2■□□□□ 0.82
KRT18-206ENST00000549078 NUDT5Q9UKK9 219 aa20.2■□□□□ 0.82
KRT18-206ENST00000549078 C3orf70A6NLC5 250 aaPredicted RBP20.2■□□□□ 0.82
KRT18-206ENST00000549078 CSH1P0DML2 217 aa20.2■□□□□ 0.82
KRT18-206ENST00000549078 CSH2P0DML3 217 aa20.2■□□□□ 0.82
KRT18-206ENST00000549078 BMP8BP34820 402 aa20.2■□□□□ 0.82
KRT18-206ENST00000549078 LONRF2Q1L5Z9 754 aa20.2■□□□□ 0.82
KRT18-206ENST00000549078 MFSD7Q6UXD7 560 aa20.2■□□□□ 0.82
KRT18-206ENST00000549078 TAC4Q86UU9 113 aa20.2■□□□□ 0.82
KRT18-206ENST00000549078 SLC13A5Q86YT5 568 aaPredicted RBP20.2■□□□□ 0.82
KRT18-206ENST00000549078 CCDC185Q8N715 623 aa20.2■□□□□ 0.82
KRT18-206ENST00000549078 RBM41Q96IZ5 413 aaKnown RBP20.2■□□□□ 0.82
KRT18-206ENST00000549078 HERPUD2Q9BSE4 406 aa20.2■□□□□ 0.82
KRT18-206ENST00000549078 FAM204AQ9H8W3 233 aa20.2■□□□□ 0.82
KRT18-206ENST00000549078 WDR6Q9NNW5 1121 aaKnown RBP20.2■□□□□ 0.82
KRT18-206ENST00000549078 TLR8Q9NR97 1041 aaKnown RBP20.2■□□□□ 0.82
KRT18-206ENST00000549078 GPATCH2LQ9NWQ4 482 aa20.2■□□□□ 0.82
KRT18-206ENST00000549078 DDIT4Q9NX09 232 aa20.2■□□□□ 0.82
KRT18-206ENST00000549078 LRRD1A4D1F6 860 aa20.19■□□□□ 0.82
KRT18-206ENST00000549078 TADA3O75528 432 aa20.19■□□□□ 0.82
KRT18-206ENST00000549078 IGLV3-25P01717 112 aa20.19■□□□□ 0.82
KRT18-206ENST00000549078 ZDHHC11BP0C7U3 371 aa20.19■□□□□ 0.82
KRT18-206ENST00000549078 KDELR1P24390 212 aa20.19■□□□□ 0.82
KRT18-206ENST00000549078 RAB30Q15771 203 aa20.19■□□□□ 0.82
KRT18-206ENST00000549078 KREMEN2Q8NCW0 462 aa20.19■□□□□ 0.82
KRT18-206ENST00000549078 TEKT4Q8WW24 435 aa20.19■□□□□ 0.82
KRT18-206ENST00000549078 SNRNP25Q9BV90 132 aaKnown RBP20.19■□□□□ 0.82
KRT18-206ENST00000549078 CLIC5Q9NZA1 410 aa20.19■□□□□ 0.82
KRT18-206ENST00000549078 LAMA3Q16787 3333 aa20.19■□□□□ 0.82
KRT18-206ENST00000549078 TCRBV7S2A1N4TA0A589 114 aa20.18■□□□□ 0.82
KRT18-206ENST00000549078 LPXNO60711 386 aa20.18■□□□□ 0.82
KRT18-206ENST00000549078 PSEN1P49768 467 aa20.18■□□□□ 0.82
KRT18-206ENST00000549078 C2orf54Q08AI8 447 aa20.18■□□□□ 0.82
KRT18-206ENST00000549078 ZC3H12AQ5D1E8 599 aaKnown RBP20.18■□□□□ 0.82
KRT18-206ENST00000549078 ERMARDQ5T6L9 678 aa20.18■□□□□ 0.82
KRT18-206ENST00000549078 PPP2R2DQ66LE6 453 aa20.18■□□□□ 0.82
KRT18-206ENST00000549078 SPOCD1Q6ZMY3 1216 aa20.18■□□□□ 0.82
KRT18-206ENST00000549078 ADAT2Q7Z6V5 191 aaKnown RBP20.18■□□□□ 0.82
KRT18-206ENST00000549078 DNAJB7Q7Z6W7 309 aaPredicted RBP20.18■□□□□ 0.82
KRT18-206ENST00000549078 KCTD6Q8NC69 237 aa20.18■□□□□ 0.82
KRT18-206ENST00000549078 CASP10Q92851 521 aa20.18■□□□□ 0.82
KRT18-206ENST00000549078 MYRFLQ96LU7 910 aa20.18■□□□□ 0.82
KRT18-206ENST00000549078 AP1M1Q9BXS5 423 aa20.18■□□□□ 0.82
KRT18-206ENST00000549078 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.18■□□□□ 0.82
KRT18-206ENST00000549078 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.18■□□□□ 0.82
KRT18-206ENST00000549078 SFMBT1Q9UHJ3 866 aa20.18■□□□□ 0.82
KRT18-206ENST00000549078 NR2E1Q9Y466 385 aa20.18■□□□□ 0.82
KRT18-206ENST00000549078 MDM4O15151 490 aa20.18■□□□□ 0.82
KRT18-206ENST00000549078 GLUD1P00367 558 aa20.18■□□□□ 0.82
KRT18-206ENST00000549078 F9P00740 461 aa20.18■□□□□ 0.82
KRT18-206ENST00000549078 CD48P09326 243 aa20.18■□□□□ 0.82
KRT18-206ENST00000549078 RALAP11233 206 aa20.18■□□□□ 0.82
KRT18-206ENST00000549078 RARGP13631 454 aa20.18■□□□□ 0.82
KRT18-206ENST00000549078 ARSEP51690 589 aa20.18■□□□□ 0.82
KRT18-206ENST00000549078 CLCN4P51793 760 aa20.18■□□□□ 0.82
KRT18-206ENST00000549078 EPHB3P54753 998 aa20.18■□□□□ 0.82
KRT18-206ENST00000549078 ITIH3Q06033 890 aa20.18■□□□□ 0.82
KRT18-206ENST00000549078 EIF4EBP2Q13542 120 aaPredicted RBP20.18■□□□□ 0.82
KRT18-206ENST00000549078 VEPH1Q14D04 833 aa20.18■□□□□ 0.82
KRT18-206ENST00000549078 CA9Q16790 459 aa20.18■□□□□ 0.82
KRT18-206ENST00000549078 ODF2Q5BJF6 829 aa20.18■□□□□ 0.82
KRT18-206ENST00000549078 ZDHHC14Q8IZN3 488 aa20.18■□□□□ 0.82
KRT18-206ENST00000549078 NOA1Q8NC60 698 aaKnown RBP20.18■□□□□ 0.82
KRT18-206ENST00000549078 RNF139Q8WU17 664 aa20.18■□□□□ 0.82
KRT18-206ENST00000549078 RPGRIP1Q96KN7 1286 aa20.18■□□□□ 0.82
KRT18-206ENST00000549078 HEMGNQ9BXL5 484 aa20.18■□□□□ 0.82
KRT18-206ENST00000549078 MAGEB5Q9BZ81 275 aa20.18■□□□□ 0.82
KRT18-206ENST00000549078 OSBPL8Q9BZF1 889 aa20.18■□□□□ 0.82
KRT18-206ENST00000549078 SMOC2Q9H3U7 446 aa20.18■□□□□ 0.82
KRT18-206ENST00000549078 RBM12Q9NTZ6 932 aaKnown RBP20.18■□□□□ 0.82
KRT18-206ENST00000549078 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.18■□□□□ 0.82
KRT18-206ENST00000549078 MTCL1Q9Y4B5 1905 aaKnown RBP20.17■□□□□ 0.82
KRT18-206ENST00000549078 CDKN2BP42772 138 aa20.17■□□□□ 0.82
KRT18-206ENST00000549078 COPS2P61201 443 aa20.17■□□□□ 0.82
KRT18-206ENST00000549078 TAF12Q16514 161 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms