RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 KCTD13Q8WZ19 329 aa16.54■□□□□ 0.24
DDX54-205ENST00000548786 SHC3Q92529 594 aa16.54■□□□□ 0.24
DDX54-205ENST00000548786 EZH1Q92800 747 aaPredicted RBP16.54■□□□□ 0.24
DDX54-205ENST00000548786 FBXO4Q9UKT5 387 aa16.54■□□□□ 0.24
DDX54-205ENST00000548786 FHOD1Q9Y613 1164 aa16.54■□□□□ 0.24
DDX54-205ENST00000548786 MED7O43513 233 aa16.53■□□□□ 0.24
DDX54-205ENST00000548786 GREM1O60565 184 aa16.53■□□□□ 0.24
DDX54-205ENST00000548786 STC2O76061 302 aa16.53■□□□□ 0.24
DDX54-205ENST00000548786 DRD1P21728 446 aa16.53■□□□□ 0.24
DDX54-205ENST00000548786 DAOAP59103 153 aa16.53■□□□□ 0.24
DDX54-205ENST00000548786 MYL5Q02045 173 aa16.53■□□□□ 0.24
DDX54-205ENST00000548786 DMWDQ09019 674 aa16.53■□□□□ 0.24
DDX54-205ENST00000548786 BSPRYQ5W0U4 402 aa16.53■□□□□ 0.24
DDX54-205ENST00000548786 KLHDC10Q6PID8 442 aa16.53■□□□□ 0.24
DDX54-205ENST00000548786 HTR3DQ70Z44 454 aa16.53■□□□□ 0.24
DDX54-205ENST00000548786 ASCL5Q7RTU5 278 aa16.53■□□□□ 0.24
DDX54-205ENST00000548786 AOPEPQ8N6M6 819 aa16.53■□□□□ 0.24
DDX54-205ENST00000548786 RPLP0P6Q8NHW5 317 aa16.53■□□□□ 0.24
DDX54-205ENST00000548786 RNF139Q8WU17 664 aa16.53■□□□□ 0.24
DDX54-205ENST00000548786 ZNF606Q8WXB4 792 aa16.53■□□□□ 0.24
DDX54-205ENST00000548786 CDK5RAP1Q96SZ6 601 aaKnown RBP16.53■□□□□ 0.24
DDX54-205ENST00000548786 SPHK2Q9NRA0 654 aa16.53■□□□□ 0.24
DDX54-205ENST00000548786 SFMBT1Q9UHJ3 866 aa16.53■□□□□ 0.24
DDX54-205ENST00000548786 CYTH4Q9UIA0 394 aa16.53■□□□□ 0.24
DDX54-205ENST00000548786 STRIP2Q9ULQ0 834 aa16.53■□□□□ 0.24
DDX54-205ENST00000548786 FRYLO94915 3013 aa16.52■□□□□ 0.24
DDX54-205ENST00000548786 NEDD8-MDP1E9PL57 170 aa16.52■□□□□ 0.24
DDX54-205ENST00000548786 FOXN3O00409 490 aaPredicted RBP16.52■□□□□ 0.24
DDX54-205ENST00000548786 MSI1O43347 362 aaKnown RBP16.52■□□□□ 0.24
DDX54-205ENST00000548786 GFRA3O60609 400 aa16.52■□□□□ 0.24
DDX54-205ENST00000548786 KLKB1P03952 638 aa16.52■□□□□ 0.24
DDX54-205ENST00000548786 CORO1AP31146 461 aaKnown RBP16.52■□□□□ 0.24
DDX54-205ENST00000548786 GPD2P43304 727 aa16.52■□□□□ 0.24
DDX54-205ENST00000548786 PXNP49023 591 aaPredicted RBP16.52■□□□□ 0.24
DDX54-205ENST00000548786 ANO6Q4KMQ2 910 aa16.52■□□□□ 0.24
DDX54-205ENST00000548786 C2orf27AQ580R0 203 aa16.52■□□□□ 0.24
DDX54-205ENST00000548786 DPY19L2P1Q6NXN4 242 aa16.52■□□□□ 0.24
DDX54-205ENST00000548786 FMNL3Q8IVF7 1028 aa16.52■□□□□ 0.24
DDX54-205ENST00000548786 SCUBE3Q8IX30 993 aa16.52■□□□□ 0.24
DDX54-205ENST00000548786 NKD2Q969F2 451 aaPredicted RBP16.52■□□□□ 0.24
DDX54-205ENST00000548786 EXOC4Q96A65 974 aa16.52■□□□□ 0.24
DDX54-205ENST00000548786 OTUB2Q96DC9 234 aa16.52■□□□□ 0.24
DDX54-205ENST00000548786 FAM81BQ96LP2 452 aa16.52■□□□□ 0.24
DDX54-205ENST00000548786 ZDHHC4Q9NPG8 344 aa16.52■□□□□ 0.24
DDX54-205ENST00000548786 PLCB1Q9NQ66 1216 aa16.52■□□□□ 0.24
DDX54-205ENST00000548786 CNGB3Q9NQW8 809 aa16.52■□□□□ 0.24
DDX54-205ENST00000548786 TRIM24O15164 1050 aa16.51■□□□□ 0.23
DDX54-205ENST00000548786 TPM2P07951 284 aa16.51■□□□□ 0.23
DDX54-205ENST00000548786 HOXD11P31277 338 aaPredicted RBP16.51■□□□□ 0.23
DDX54-205ENST00000548786 COG7P83436 770 aa16.51■□□□□ 0.23
DDX54-205ENST00000548786 GAD2Q05329 585 aa16.51■□□□□ 0.23
DDX54-205ENST00000548786 PPP2R5DQ14738 602 aa16.51■□□□□ 0.23
DDX54-205ENST00000548786 DRAP1Q14919 205 aaPredicted RBP16.51■□□□□ 0.23
DDX54-205ENST00000548786 KLHDC7AQ5VTJ3 777 aa16.51■□□□□ 0.23
DDX54-205ENST00000548786 ZC3H14Q6PJT7 736 aaKnown RBP16.51■□□□□ 0.23
DDX54-205ENST00000548786 Q6ZNB5 142 aa16.51■□□□□ 0.23
DDX54-205ENST00000548786 SLC47A2Q86VL8 602 aa16.51■□□□□ 0.23
DDX54-205ENST00000548786 DENND1CQ8IV53 801 aa16.51■□□□□ 0.23
DDX54-205ENST00000548786 SYNPOQ8N3V7 929 aa16.51■□□□□ 0.23
DDX54-205ENST00000548786 KIAA1958Q8N8K9 716 aa16.51■□□□□ 0.23
DDX54-205ENST00000548786 ATRIPQ8WXE1 791 aa16.51■□□□□ 0.23
DDX54-205ENST00000548786 FAM149B1Q96BN6 582 aa16.51■□□□□ 0.23
DDX54-205ENST00000548786 PNKPQ96T60 521 aa16.51■□□□□ 0.23
DDX54-205ENST00000548786 IER2Q9BTL4 223 aa16.51■□□□□ 0.23
DDX54-205ENST00000548786 BBS2Q9BXC9 721 aa16.51■□□□□ 0.23
DDX54-205ENST00000548786 ARHGEF4Q9NR80 690 aa16.51■□□□□ 0.23
DDX54-205ENST00000548786 FAM207AQ9NSI2 230 aaPredicted RBP16.51■□□□□ 0.23
DDX54-205ENST00000548786 PLK2Q9NYY3 685 aa16.51■□□□□ 0.23
DDX54-205ENST00000548786 TJP2Q9UDY2 1190 aa16.51■□□□□ 0.23
DDX54-205ENST00000548786 PRR23AA6NEV1 266 aa16.5■□□□□ 0.23
DDX54-205ENST00000548786 CHURC1-FNTBB4DL54 471 aa16.5■□□□□ 0.23
DDX54-205ENST00000548786 E5RJQ4 531 aa16.5■□□□□ 0.23
DDX54-205ENST00000548786 KAT7O95251 611 aa16.5■□□□□ 0.23
DDX54-205ENST00000548786 LTFP02788 710 aa16.5■□□□□ 0.23
DDX54-205ENST00000548786 TDGF1P13385 188 aa16.5■□□□□ 0.23
DDX54-205ENST00000548786 CDK11BP21127 795 aaKnown RBP16.5■□□□□ 0.23
DDX54-205ENST00000548786 CLCN1P35523 988 aa16.5■□□□□ 0.23
DDX54-205ENST00000548786 FNTBP49356 437 aa16.5■□□□□ 0.23
DDX54-205ENST00000548786 COPB1P53618 953 aaKnown RBP16.5■□□□□ 0.23
DDX54-205ENST00000548786 PTK2Q05397 1052 aa16.5■□□□□ 0.23
DDX54-205ENST00000548786 PDCLQ13371 301 aa16.5■□□□□ 0.23
DDX54-205ENST00000548786 ZNF528Q3MIS6 628 aa16.5■□□□□ 0.23
DDX54-205ENST00000548786 FKBP15Q5T1M5 1219 aa16.5■□□□□ 0.23
DDX54-205ENST00000548786 ZNF276Q8N554 614 aa16.5■□□□□ 0.23
DDX54-205ENST00000548786 GOLGA1Q92805 767 aa16.5■□□□□ 0.23
DDX54-205ENST00000548786 HSFY1Q96LI6 401 aa16.5■□□□□ 0.23
DDX54-205ENST00000548786 PCMTD1Q96MG8 357 aaPredicted RBP16.5■□□□□ 0.23
DDX54-205ENST00000548786 HHIPQ96QV1 700 aa16.5■□□□□ 0.23
DDX54-205ENST00000548786 ABCC13Q9NSE7 274 aa16.5■□□□□ 0.23
DDX54-205ENST00000548786 OLA1Q9NTK5 396 aaKnown RBP16.5■□□□□ 0.23
DDX54-205ENST00000548786 ZSCAN32Q9NX65 697 aa16.5■□□□□ 0.23
DDX54-205ENST00000548786 AGO1Q9UL18 857 aaKnown RBP16.5■□□□□ 0.23
DDX54-205ENST00000548786 K7EQS6 105 aa16.49■□□□□ 0.23
DDX54-205ENST00000548786 K7ESF4 209 aa16.49■□□□□ 0.23
DDX54-205ENST00000548786 TULP3O75386 442 aa16.49■□□□□ 0.23
DDX54-205ENST00000548786 FBXO21O94952 628 aa16.49■□□□□ 0.23
DDX54-205ENST00000548786 APODP05090 189 aa16.49■□□□□ 0.23
DDX54-205ENST00000548786 NCAM1P13591 858 aa16.49■□□□□ 0.23
DDX54-205ENST00000548786 TYRP14679 529 aa16.49■□□□□ 0.23
DDX54-205ENST00000548786 UCHL3P15374 230 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms