RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 TRUB2O95900 331 aaKnown RBP23.94■■□□□ 1.42
NPAS3-206ENST00000548645 SPATA31D3P0C874 917 aa23.94■■□□□ 1.42
NPAS3-206ENST00000548645 CSH1P0DML2 217 aa23.94■■□□□ 1.42
NPAS3-206ENST00000548645 CSH2P0DML3 217 aa23.94■■□□□ 1.42
NPAS3-206ENST00000548645 FASTKD1Q53R41 847 aaKnown RBP23.94■■□□□ 1.42
NPAS3-206ENST00000548645 SPATA31D4Q6ZUB0 917 aa23.94■■□□□ 1.42
NPAS3-206ENST00000548645 DENND5BQ6ZUT9 1274 aa23.94■■□□□ 1.42
NPAS3-206ENST00000548645 CCDC124Q96CT7 223 aaKnown RBP23.94■■□□□ 1.42
NPAS3-206ENST00000548645 GPRASP2Q96D09 838 aa23.94■■□□□ 1.42
NPAS3-206ENST00000548645 MPP4Q96JB8 637 aa23.94■■□□□ 1.42
NPAS3-206ENST00000548645 ETNK2Q9NVF9 386 aa23.94■■□□□ 1.42
NPAS3-206ENST00000548645 USP18Q9UMW8 372 aa23.94■■□□□ 1.42
NPAS3-206ENST00000548645 CLRN2A0PK11 232 aa23.93■■□□□ 1.42
NPAS3-206ENST00000548645 SIN3BO75182 1162 aa23.93■■□□□ 1.42
NPAS3-206ENST00000548645 RAG1P15918 1043 aa23.93■■□□□ 1.42
NPAS3-206ENST00000548645 TGFB2P61812 414 aa23.93■■□□□ 1.42
NPAS3-206ENST00000548645 FAM47CQ5HY64 1035 aa23.93■■□□□ 1.42
NPAS3-206ENST00000548645 NLRP4Q96MN2 994 aa23.93■■□□□ 1.42
NPAS3-206ENST00000548645 KLC2Q9H0B6 622 aa23.93■■□□□ 1.42
NPAS3-206ENST00000548645 FAM96AQ9H5X1 160 aa23.93■■□□□ 1.42
NPAS3-206ENST00000548645 LMCD1Q9NZU5 365 aa23.93■■□□□ 1.42
NPAS3-206ENST00000548645 TJP2Q9UDY2 1190 aa23.93■■□□□ 1.42
NPAS3-206ENST00000548645 POMPQ9Y244 141 aa23.93■■□□□ 1.42
NPAS3-206ENST00000548645 L1CAMP32004 1257 aa23.93■■□□□ 1.42
NPAS3-206ENST00000548645 FOLH1Q04609 750 aa23.93■■□□□ 1.42
NPAS3-206ENST00000548645 MTMR2Q13614 643 aa23.93■■□□□ 1.42
NPAS3-206ENST00000548645 ACAP1Q15027 740 aa23.93■■□□□ 1.42
NPAS3-206ENST00000548645 SEZ6Q53EL9 994 aa23.93■■□□□ 1.42
NPAS3-206ENST00000548645 XRRA1Q6P2D8 792 aa23.93■■□□□ 1.42
NPAS3-206ENST00000548645 CAND1Q86VP6 1230 aaKnown RBP23.93■■□□□ 1.42
NPAS3-206ENST00000548645 WDR49Q8IV35 697 aa23.93■■□□□ 1.42
NPAS3-206ENST00000548645 CMTM5Q96DZ9 223 aa23.93■■□□□ 1.42
NPAS3-206ENST00000548645 PLAC1Q9HBJ0 212 aa23.93■■□□□ 1.42
NPAS3-206ENST00000548645 ADGRA2Q96PE1 1338 aa23.93■■□□□ 1.42
NPAS3-206ENST00000548645 MAFGO15525 162 aa23.92■■□□□ 1.42
NPAS3-206ENST00000548645 NAMPTP43490 491 aa23.92■■□□□ 1.42
NPAS3-206ENST00000548645 RTKN2Q8IZC4 609 aa23.92■■□□□ 1.42
NPAS3-206ENST00000548645 TMEM143Q96AN5 459 aa23.92■■□□□ 1.42
NPAS3-206ENST00000548645 LENG1Q96BZ8 264 aaPredicted RBP23.92■■□□□ 1.42
NPAS3-206ENST00000548645 LHX5Q9H2C1 402 aa23.92■■□□□ 1.42
NPAS3-206ENST00000548645 NRDE2Q9H7Z3 1164 aa23.92■■□□□ 1.42
NPAS3-206ENST00000548645 USP29Q9HBJ7 922 aa23.92■■□□□ 1.42
NPAS3-206ENST00000548645 C15orf38-AP3S2A0A0A6YYH1 394 aa23.92■■□□□ 1.42
NPAS3-206ENST00000548645 TMCC1O94876 653 aa23.92■■□□□ 1.42
NPAS3-206ENST00000548645 OR6B1O95007 311 aa23.92■■□□□ 1.42
NPAS3-206ENST00000548645 ATG7O95352 703 aa23.92■■□□□ 1.42
NPAS3-206ENST00000548645 MYL4P12829 197 aa23.92■■□□□ 1.42
NPAS3-206ENST00000548645 GRAMD1BQ3KR37 738 aa23.92■■□□□ 1.42
NPAS3-206ENST00000548645 STXBP5Q5T5C0 1151 aa23.92■■□□□ 1.42
NPAS3-206ENST00000548645 UNC5AQ6ZN44 842 aa23.92■■□□□ 1.42
NPAS3-206ENST00000548645 ARPINQ7Z6K5 226 aa23.92■■□□□ 1.42
NPAS3-206ENST00000548645 CCDC60Q8IWA6 550 aaPredicted RBP23.92■■□□□ 1.42
NPAS3-206ENST00000548645 ADGRF2Q8IZF7 708 aa23.92■■□□□ 1.42
NPAS3-206ENST00000548645 SLC38A10Q9HBR0 1119 aa23.92■■□□□ 1.42
NPAS3-206ENST00000548645 SLC15A5A6NIM6 579 aa23.91■■□□□ 1.42
NPAS3-206ENST00000548645 TTLL13PA6NNM8 815 aa23.91■■□□□ 1.42
NPAS3-206ENST00000548645 KCNN4O15554 427 aa23.91■■□□□ 1.42
NPAS3-206ENST00000548645 CD19P15391 556 aa23.91■■□□□ 1.42
NPAS3-206ENST00000548645 CCND2P30279 289 aa23.91■■□□□ 1.42
NPAS3-206ENST00000548645 HIRAP54198 1017 aaPredicted RBP23.91■■□□□ 1.42
NPAS3-206ENST00000548645 MMRN1Q13201 1228 aa23.91■■□□□ 1.42
NPAS3-206ENST00000548645 BRSK2Q8IWQ3 736 aa23.91■■□□□ 1.42
NPAS3-206ENST00000548645 ZNF778Q96MU6 729 aa23.91■■□□□ 1.42
NPAS3-206ENST00000548645 CYP4F11Q9HBI6 524 aa23.91■■□□□ 1.42
NPAS3-206ENST00000548645 SF3B1O75533 1304 aaKnown RBP eCLIP23.91■■□□□ 1.42
NPAS3-206ENST00000548645 FAM159BA6NKW6 160 aa23.91■■□□□ 1.42
NPAS3-206ENST00000548645 RPL5P46777 297 aaKnown RBP23.91■■□□□ 1.42
NPAS3-206ENST00000548645 GABRB2P47870 512 aa23.91■■□□□ 1.42
NPAS3-206ENST00000548645 SLC1A6P48664 564 aa23.91■■□□□ 1.42
NPAS3-206ENST00000548645 CDH6P55285 790 aa23.91■■□□□ 1.42
NPAS3-206ENST00000548645 SP4Q02446 784 aa23.91■■□□□ 1.42
NPAS3-206ENST00000548645 XKR3Q5GH77 459 aa23.91■■□□□ 1.42
NPAS3-206ENST00000548645 TEDDM1Q5T9Z0 273 aa23.91■■□□□ 1.42
NPAS3-206ENST00000548645 MBLAC2Q68D91 279 aa23.91■■□□□ 1.42
NPAS3-206ENST00000548645 TIFABQ6ZNK6 161 aa23.91■■□□□ 1.42
NPAS3-206ENST00000548645 HIPK4Q8NE63 616 aa23.91■■□□□ 1.42
NPAS3-206ENST00000548645 GSDMBQ8TAX9 411 aa23.91■■□□□ 1.42
NPAS3-206ENST00000548645 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.91■■□□□ 1.42
NPAS3-206ENST00000548645 SDCBP2Q9H190 292 aa23.91■■□□□ 1.42
NPAS3-206ENST00000548645 CHCHD3Q9NX63 227 aaKnown RBP23.91■■□□□ 1.42
NPAS3-206ENST00000548645 WDR81Q562E7 1941 aa23.91■■□□□ 1.42
NPAS3-206ENST00000548645 HMX2A2RU54 273 aa23.9■■□□□ 1.42
NPAS3-206ENST00000548645 MED7O43513 233 aa23.9■■□□□ 1.42
NPAS3-206ENST00000548645 LYPLA1O75608 230 aaPredicted RBP23.9■■□□□ 1.42
NPAS3-206ENST00000548645 PGM3O95394 542 aa23.9■■□□□ 1.42
NPAS3-206ENST00000548645 APRTP07741 180 aa23.9■■□□□ 1.42
NPAS3-206ENST00000548645 ITGA2BP08514 1039 aa23.9■■□□□ 1.42
NPAS3-206ENST00000548645 CNTN2Q02246 1040 aa23.9■■□□□ 1.42
NPAS3-206ENST00000548645 TMEM259Q4ZIN3 620 aa23.9■■□□□ 1.42
NPAS3-206ENST00000548645 XYLT1Q86Y38 959 aa23.9■■□□□ 1.42
NPAS3-206ENST00000548645 SLC4A11Q8NBS3 891 aa23.9■■□□□ 1.42
NPAS3-206ENST00000548645 MTMR12Q9C0I1 747 aa23.9■■□□□ 1.42
NPAS3-206ENST00000548645 PREBQ9HCU5 417 aa23.9■■□□□ 1.42
NPAS3-206ENST00000548645 ASNSD1Q9NWL6 643 aa23.9■■□□□ 1.42
NPAS3-206ENST00000548645 GALNT8Q9NY28 637 aa23.9■■□□□ 1.42
NPAS3-206ENST00000548645 CYTH4Q9UIA0 394 aa23.9■■□□□ 1.42
NPAS3-206ENST00000548645 DTNAQ9Y4J8 743 aa23.9■■□□□ 1.42
NPAS3-206ENST00000548645 ITM2AO43736 263 aa23.9■■□□□ 1.42
NPAS3-206ENST00000548645 TRPC3Q13507 836 aa23.9■■□□□ 1.42
NPAS3-206ENST00000548645 FBXL19Q6PCT2 694 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms