RNA–Protein interactions for RNA: ENST00000548068.5

RAB5B-204, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-204ENST00000548068 CALN1Q9BXU9 219 aa12.89□□□□□ -0.35
RAB5B-204ENST00000548068 DCLK3Q9C098 648 aa12.89□□□□□ -0.35
RAB5B-204ENST00000548068 IL37Q9NZH6 218 aa12.89□□□□□ -0.35
RAB5B-204ENST00000548068 FNIP2Q9P278 1114 aa12.89□□□□□ -0.35
RAB5B-204ENST00000548068 RCOR3Q9P2K3 495 aaPredicted RBP12.89□□□□□ -0.35
RAB5B-204ENST00000548068 AP4E1Q9UPM8 1137 aa12.89□□□□□ -0.35
RAB5B-204ENST00000548068 NAALADL1Q9UQQ1 740 aa12.89□□□□□ -0.35
RAB5B-204ENST00000548068 UTP11Q9Y3A2 253 aaKnown RBP12.89□□□□□ -0.35
RAB5B-204ENST00000548068 GREB1Q4ZG55 1949 aa12.89□□□□□ -0.35
RAB5B-204ENST00000548068 TCRBV7S2A1N4TA0A589 114 aa12.88□□□□□ -0.35
RAB5B-204ENST00000548068 WDR27A2RRH5 827 aa12.88□□□□□ -0.35
RAB5B-204ENST00000548068 C2CD2LO14523 706 aa12.88□□□□□ -0.35
RAB5B-204ENST00000548068 TLL1O43897 1013 aa12.88□□□□□ -0.35
RAB5B-204ENST00000548068 FGF18O76093 207 aa12.88□□□□□ -0.35
RAB5B-204ENST00000548068 ECEL1O95672 775 aa12.88□□□□□ -0.35
RAB5B-204ENST00000548068 GAS8O95995 478 aa12.88□□□□□ -0.35
RAB5B-204ENST00000548068 FYNP06241 537 aa12.88□□□□□ -0.35
RAB5B-204ENST00000548068 ATXN8OSP0DMR3 200 aa12.88□□□□□ -0.35
RAB5B-204ENST00000548068 ZFXP17010 805 aaPredicted RBP12.88□□□□□ -0.35
RAB5B-204ENST00000548068 YWHAQP27348 245 aa12.88□□□□□ -0.35
RAB5B-204ENST00000548068 ARL4AP40617 200 aa12.88□□□□□ -0.35
RAB5B-204ENST00000548068 ARSEP51690 589 aa12.88□□□□□ -0.35
RAB5B-204ENST00000548068 IFRD2Q12894 506 aaPredicted RBP12.88□□□□□ -0.35
RAB5B-204ENST00000548068 CUL1Q13616 776 aa12.88□□□□□ -0.35
RAB5B-204ENST00000548068 DPYSL3Q14195 570 aa12.88□□□□□ -0.35
RAB5B-204ENST00000548068 DPYSL2Q16555 572 aa12.88□□□□□ -0.35
RAB5B-204ENST00000548068 DDR2Q16832 855 aa12.88□□□□□ -0.35
RAB5B-204ENST00000548068 EFHC2Q5JST6 749 aa12.88□□□□□ -0.35
RAB5B-204ENST00000548068 SYPL2Q5VXT5 272 aa12.88□□□□□ -0.35
RAB5B-204ENST00000548068 KAZNQ674X7 775 aa12.88□□□□□ -0.35
RAB5B-204ENST00000548068 DRICH1Q6PGQ1 229 aaPredicted RBP12.88□□□□□ -0.35
RAB5B-204ENST00000548068 RSPO2Q6UXX9 243 aaPredicted RBP12.88□□□□□ -0.35
RAB5B-204ENST00000548068 RFX6Q8HWS3 928 aa12.88□□□□□ -0.35
RAB5B-204ENST00000548068 EIF1ADQ8N9N8 165 aaKnown RBP12.88□□□□□ -0.35
RAB5B-204ENST00000548068 SCAMP5Q8TAC9 235 aa12.88□□□□□ -0.35
RAB5B-204ENST00000548068 ZNF461Q8TAF7 563 aa12.88□□□□□ -0.35
RAB5B-204ENST00000548068 FAM71BQ8TC56 605 aa12.88□□□□□ -0.35
RAB5B-204ENST00000548068 HNRNPLLQ8WVV9 542 aaKnown RBP12.88□□□□□ -0.35
RAB5B-204ENST00000548068 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.88□□□□□ -0.355e-8■■■■■ 65.3
RAB5B-204ENST00000548068 SLCO2A1Q92959 643 aa12.88□□□□□ -0.35
RAB5B-204ENST00000548068 FBXO32Q969P5 355 aa12.88□□□□□ -0.35
RAB5B-204ENST00000548068 ACSF2Q96CM8 615 aaPredicted RBP12.88□□□□□ -0.35
RAB5B-204ENST00000548068 PNKPQ96T60 521 aa12.88□□□□□ -0.35
RAB5B-204ENST00000548068 PCDH18Q9HCL0 1135 aa12.88□□□□□ -0.35
RAB5B-204ENST00000548068 OLA1Q9NTK5 396 aaKnown RBP12.88□□□□□ -0.35
RAB5B-204ENST00000548068 DDIT4Q9NX09 232 aa12.88□□□□□ -0.35
RAB5B-204ENST00000548068 AMACRQ9UHK6 382 aa12.88□□□□□ -0.35
RAB5B-204ENST00000548068 FZD10Q9ULW2 581 aa12.88□□□□□ -0.35
RAB5B-204ENST00000548068 LZTS1Q9Y250 596 aa12.88□□□□□ -0.35
RAB5B-204ENST00000548068 ZNF638Q14966 1978 aaKnown RBP12.88□□□□□ -0.35
RAB5B-204ENST00000548068 FAM92AA1XBS5 289 aa12.87□□□□□ -0.35
RAB5B-204ENST00000548068 ABLIM3O94929 683 aa12.87□□□□□ -0.35
RAB5B-204ENST00000548068 KRT10P13645 584 aa12.87□□□□□ -0.35
RAB5B-204ENST00000548068 ATF2P15336 505 aa12.87□□□□□ -0.35
RAB5B-204ENST00000548068 SYN1P17600 705 aa12.87□□□□□ -0.35
RAB5B-204ENST00000548068 TFE3P19532 575 aaPredicted RBP12.87□□□□□ -0.35
RAB5B-204ENST00000548068 ELF1P32519 619 aa12.87□□□□□ -0.35
RAB5B-204ENST00000548068 EPHB4P54760 987 aa12.87□□□□□ -0.35
RAB5B-204ENST00000548068 VSNL1P62760 191 aa12.87□□□□□ -0.35
RAB5B-204ENST00000548068 GUCY2DQ02846 1103 aa12.87□□□□□ -0.35
RAB5B-204ENST00000548068 SCAPQ12770 1279 aa12.87□□□□□ -0.35
RAB5B-204ENST00000548068 DUSP4Q13115 394 aa12.87□□□□□ -0.35
RAB5B-204ENST00000548068 NME3Q13232 169 aa12.87□□□□□ -0.35
RAB5B-204ENST00000548068 RAB33AQ14088 237 aa12.87□□□□□ -0.35
RAB5B-204ENST00000548068 VEPH1Q14D04 833 aa12.87□□□□□ -0.35
RAB5B-204ENST00000548068 OTUD1Q5VV17 481 aaPredicted RBP12.87□□□□□ -0.35
RAB5B-204ENST00000548068 MSANTD2Q6P1R3 559 aa12.87□□□□□ -0.35
RAB5B-204ENST00000548068 FBXO38Q6PIJ6 1188 aa12.87□□□□□ -0.35
RAB5B-204ENST00000548068 TMCO3Q6UWJ1 677 aa12.87□□□□□ -0.35
RAB5B-204ENST00000548068 FAM131BQ86XD5 332 aa12.87□□□□□ -0.35
RAB5B-204ENST00000548068 PDZD8Q8NEN9 1154 aa12.87□□□□□ -0.35
RAB5B-204ENST00000548068 ATL2Q8NHH9 583 aa12.87□□□□□ -0.35
RAB5B-204ENST00000548068 DQX1Q8TE96 717 aaKnown RBP12.87□□□□□ -0.35
RAB5B-204ENST00000548068 OVCA2Q8WZ82 227 aa12.87□□□□□ -0.35
RAB5B-204ENST00000548068 EDEM1Q92611 657 aa12.87□□□□□ -0.35
RAB5B-204ENST00000548068 SERPINB11Q96P15 392 aa12.87□□□□□ -0.35
RAB5B-204ENST00000548068 CDK5RAP1Q96SZ6 601 aaKnown RBP12.87□□□□□ -0.35
RAB5B-204ENST00000548068 CLSTN3Q9BQT9 956 aa12.87□□□□□ -0.35
RAB5B-204ENST00000548068 TTLL2Q9BWV7 592 aa12.87□□□□□ -0.35
RAB5B-204ENST00000548068 ZBP1Q9H171 429 aa12.87□□□□□ -0.35
RAB5B-204ENST00000548068 EPC1Q9H2F5 836 aa12.87□□□□□ -0.35
RAB5B-204ENST00000548068 SMOC2Q9H3U7 446 aa12.87□□□□□ -0.35
RAB5B-204ENST00000548068 DHX35Q9H5Z1 703 aaKnown RBP12.87□□□□□ -0.35
RAB5B-204ENST00000548068 ARFGAP3Q9NP61 516 aa12.87□□□□□ -0.35
RAB5B-204ENST00000548068 TLR8Q9NR97 1041 aaKnown RBP12.87□□□□□ -0.35
RAB5B-204ENST00000548068 FAM114A2Q9NRY5 505 aa12.87□□□□□ -0.35
RAB5B-204ENST00000548068 CLIC5Q9NZA1 410 aa12.87□□□□□ -0.35
RAB5B-204ENST00000548068 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.87□□□□□ -0.35
RAB5B-204ENST00000548068 CXXC1Q9P0U4 656 aaPredicted RBP12.87□□□□□ -0.35
RAB5B-204ENST00000548068 DMGDHQ9UI17 866 aaKnown RBP12.87□□□□□ -0.35
RAB5B-204ENST00000548068 ZMYND8Q9ULU4 1186 aaPredicted RBP12.87□□□□□ -0.35
RAB5B-204ENST00000548068 NR2E1Q9Y466 385 aa12.87□□□□□ -0.35
RAB5B-204ENST00000548068 SYNJ2BP-COX16A0A087WUM0 186 aa12.86□□□□□ -0.35
RAB5B-204ENST00000548068 A0A1W2PQH9 124 aa12.86□□□□□ -0.35
RAB5B-204ENST00000548068 SLC38A8A6NNN8 435 aa12.86□□□□□ -0.35
RAB5B-204ENST00000548068 H3BRJ5 948 aa12.86□□□□□ -0.35
RAB5B-204ENST00000548068 APOC4-APOC2K7ER74 178 aa12.86□□□□□ -0.35
RAB5B-204ENST00000548068 TTI1O43156 1089 aa12.86□□□□□ -0.35
RAB5B-204ENST00000548068 CST8O60676 142 aa12.86□□□□□ -0.35
RAB5B-204ENST00000548068 VNN2O95498 520 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms