RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 PHOX2BQ99453 314 aa12.39□□□□□ -0.43
RAB5C-204ENST00000547517 BPIFA3Q9BQP9 254 aa12.39□□□□□ -0.43
RAB5C-204ENST00000547517 IER2Q9BTL4 223 aa12.39□□□□□ -0.43
RAB5C-204ENST00000547517 IRF2BPLQ9H1B7 796 aa12.39□□□□□ -0.43
RAB5C-204ENST00000547517 GANQ9H2C0 597 aa12.39□□□□□ -0.43
RAB5C-204ENST00000547517 FAM207AQ9NSI2 230 aaPredicted RBP12.39□□□□□ -0.43
RAB5C-204ENST00000547517 STRIP2Q9ULQ0 834 aa12.39□□□□□ -0.43
RAB5C-204ENST00000547517 PIEZO1Q92508 2521 aa12.38□□□□□ -0.43
RAB5C-204ENST00000547517 SLC12A8A0AV02 714 aa12.38□□□□□ -0.43
RAB5C-204ENST00000547517 E5RJQ4 531 aa12.38□□□□□ -0.43
RAB5C-204ENST00000547517 F8VZ95 297 aa12.38□□□□□ -0.43
RAB5C-204ENST00000547517 GREM1O60565 184 aa12.38□□□□□ -0.43
RAB5C-204ENST00000547517 FBXO21O94952 628 aa12.38□□□□□ -0.43
RAB5C-204ENST00000547517 OPRD1P41143 372 aa12.38□□□□□ -0.43
RAB5C-204ENST00000547517 ZNF165P49910 485 aa12.38□□□□□ -0.43
RAB5C-204ENST00000547517 GALK1P51570 392 aa12.38□□□□□ -0.43
RAB5C-204ENST00000547517 UBXN1Q04323 297 aa12.38□□□□□ -0.43
RAB5C-204ENST00000547517 GAS6Q14393 721 aa12.38□□□□□ -0.43
RAB5C-204ENST00000547517 SYCP1Q15431 976 aa12.38□□□□□ -0.43
RAB5C-204ENST00000547517 LY6G5CQ5SRR4 150 aa12.38□□□□□ -0.43
RAB5C-204ENST00000547517 RHBDF2Q6PJF5 856 aa12.38□□□□□ -0.43
RAB5C-204ENST00000547517 TSSK4Q6SA08 328 aa12.38□□□□□ -0.43
RAB5C-204ENST00000547517 HTR3DQ70Z44 454 aa12.38□□□□□ -0.43
RAB5C-204ENST00000547517 C12orf40Q86WS4 652 aa12.38□□□□□ -0.43
RAB5C-204ENST00000547517 FAM71AQ8IYT1 594 aa12.38□□□□□ -0.43
RAB5C-204ENST00000547517 MAML2Q8IZL2 1156 aaPredicted RBP12.38□□□□□ -0.43
RAB5C-204ENST00000547517 ADGRG2Q8IZP9 1017 aa12.38□□□□□ -0.43
RAB5C-204ENST00000547517 C1orf131Q8NDD1 294 aaKnown RBP12.38□□□□□ -0.43
RAB5C-204ENST00000547517 IRGQQ8WZA9 623 aa12.38□□□□□ -0.43
RAB5C-204ENST00000547517 GOLGA1Q92805 767 aa12.38□□□□□ -0.43
RAB5C-204ENST00000547517 FAM149B1Q96BN6 582 aa12.38□□□□□ -0.43
RAB5C-204ENST00000547517 FUCA2Q9BTY2 467 aa12.38□□□□□ -0.43
RAB5C-204ENST00000547517 NAA15Q9BXJ9 866 aaKnown RBP12.38□□□□□ -0.43
RAB5C-204ENST00000547517 FBRSL1Q9HCM7 1045 aaKnown RBP12.38□□□□□ -0.43
RAB5C-204ENST00000547517 PLCB1Q9NQ66 1216 aa12.38□□□□□ -0.43
RAB5C-204ENST00000547517 PRMT8Q9NR22 394 aaPredicted RBP12.38□□□□□ -0.43
RAB5C-204ENST00000547517 ABCC13Q9NSE7 274 aa12.38□□□□□ -0.43
RAB5C-204ENST00000547517 OLA1Q9NTK5 396 aaKnown RBP12.38□□□□□ -0.43
RAB5C-204ENST00000547517 CYTH4Q9UIA0 394 aa12.38□□□□□ -0.43
RAB5C-204ENST00000547517 EPHB6O15197 1021 aa12.37□□□□□ -0.43
RAB5C-204ENST00000547517 MSI1O43347 362 aaKnown RBP12.37□□□□□ -0.43
RAB5C-204ENST00000547517 RNF40O75150 1001 aa12.37□□□□□ -0.43
RAB5C-204ENST00000547517 LTFP02788 710 aa12.37□□□□□ -0.43
RAB5C-204ENST00000547517 SP9P0CG40 484 aa12.37□□□□□ -0.43
RAB5C-204ENST00000547517 DRD1P21728 446 aa12.37□□□□□ -0.43
RAB5C-204ENST00000547517 CORO1AP31146 461 aaKnown RBP12.37□□□□□ -0.43
RAB5C-204ENST00000547517 CLCN1P35523 988 aa12.37□□□□□ -0.43
RAB5C-204ENST00000547517 KRT9P35527 623 aa12.37□□□□□ -0.43
RAB5C-204ENST00000547517 ACADSBP45954 432 aa12.37□□□□□ -0.43
RAB5C-204ENST00000547517 CCR3P51677 355 aa12.37□□□□□ -0.43
RAB5C-204ENST00000547517 POLR2FP61218 127 aaKnown RBP12.37□□□□□ -0.43
RAB5C-204ENST00000547517 COG7P83436 770 aa12.37□□□□□ -0.43
RAB5C-204ENST00000547517 SATB1Q01826 763 aa12.37□□□□□ -0.43
RAB5C-204ENST00000547517 CSTF1Q05048 431 aaKnown RBP12.37□□□□□ -0.43
RAB5C-204ENST00000547517 GAD2Q05329 585 aa12.37□□□□□ -0.43
RAB5C-204ENST00000547517 KDSRQ06136 332 aa12.37□□□□□ -0.43
RAB5C-204ENST00000547517 ANO4Q32M45 955 aa12.37□□□□□ -0.43
RAB5C-204ENST00000547517 Q6ZNB5 142 aa12.37□□□□□ -0.43
RAB5C-204ENST00000547517 APTXQ7Z2E3 356 aaKnown RBP12.37□□□□□ -0.43
RAB5C-204ENST00000547517 FMNL3Q8IVF7 1028 aa12.37□□□□□ -0.43
RAB5C-204ENST00000547517 SCUBE3Q8IX30 993 aa12.37□□□□□ -0.43
RAB5C-204ENST00000547517 STK32AQ8WU08 396 aa12.37□□□□□ -0.43
RAB5C-204ENST00000547517 BHMTQ93088 406 aa12.37□□□□□ -0.43
RAB5C-204ENST00000547517 SLC4A5Q9BY07 1137 aa12.37□□□□□ -0.43
RAB5C-204ENST00000547517 NLRC4Q9NPP4 1024 aa12.37□□□□□ -0.43
RAB5C-204ENST00000547517 SPHK2Q9NRA0 654 aa12.37□□□□□ -0.43
RAB5C-204ENST00000547517 TJP2Q9UDY2 1190 aa12.37□□□□□ -0.43
RAB5C-204ENST00000547517 SFMBT1Q9UHJ3 866 aa12.37□□□□□ -0.43
RAB5C-204ENST00000547517 PCDHGC3Q9UN70 934 aa12.37□□□□□ -0.43
RAB5C-204ENST00000547517 SIK3Q9Y2K2 1263 aa12.37□□□□□ -0.43
RAB5C-204ENST00000547517 CEP83Q9Y592 693 aa12.37□□□□□ -0.43
RAB5C-204ENST00000547517 FAM170AA1A519 330 aa12.36□□□□□ -0.43
RAB5C-204ENST00000547517 SMTNL1A8MU46 457 aa12.36□□□□□ -0.43
RAB5C-204ENST00000547517 NEDD8-MDP1E9PL57 170 aa12.36□□□□□ -0.43
RAB5C-204ENST00000547517 HOXC11O43248 304 aaPredicted RBP12.36□□□□□ -0.43
RAB5C-204ENST00000547517 PAPSS1O43252 624 aaPredicted RBP12.36□□□□□ -0.43
RAB5C-204ENST00000547517 SART1O43290 800 aaKnown RBP12.36□□□□□ -0.43
RAB5C-204ENST00000547517 GFPT2O94808 682 aa12.36□□□□□ -0.43
RAB5C-204ENST00000547517 KLKB1P03952 638 aa12.36□□□□□ -0.43
RAB5C-204ENST00000547517 CYP11B1P15538 503 aa12.36□□□□□ -0.43
RAB5C-204ENST00000547517 SLC6A11P48066 632 aa12.36□□□□□ -0.43
RAB5C-204ENST00000547517 RPL34P49207 117 aaKnown RBP12.36□□□□□ -0.43
RAB5C-204ENST00000547517 SEC13P55735 322 aa12.36□□□□□ -0.43
RAB5C-204ENST00000547517 BPIFB4P59827 614 aa12.36□□□□□ -0.43
RAB5C-204ENST00000547517 TAF3Q5VWG9 929 aa12.36□□□□□ -0.43
RAB5C-204ENST00000547517 SMYD5Q6GMV2 418 aa12.36□□□□□ -0.43
RAB5C-204ENST00000547517 MSANTD2Q6P1R3 559 aa12.36□□□□□ -0.43
RAB5C-204ENST00000547517 PKN3Q6P5Z2 889 aa12.36□□□□□ -0.43
RAB5C-204ENST00000547517 TPGS1Q6ZTW0 290 aa12.36□□□□□ -0.43
RAB5C-204ENST00000547517 TMEM25Q86YD3 366 aa12.36□□□□□ -0.43
RAB5C-204ENST00000547517 DENND1CQ8IV53 801 aa12.36□□□□□ -0.43
RAB5C-204ENST00000547517 SYNPOQ8N3V7 929 aa12.36□□□□□ -0.43
RAB5C-204ENST00000547517 SPEM1Q8N4L4 309 aa12.36□□□□□ -0.43
RAB5C-204ENST00000547517 NAT16Q8N8M0 369 aa12.36□□□□□ -0.43
RAB5C-204ENST00000547517 NEK11Q8NG66 645 aa12.36□□□□□ -0.43
RAB5C-204ENST00000547517 IPO4Q8TEX9 1081 aaKnown RBP12.36□□□□□ -0.43
RAB5C-204ENST00000547517 EZH1Q92800 747 aaPredicted RBP12.36□□□□□ -0.43
RAB5C-204ENST00000547517 PLD4Q96BZ4 506 aa12.36□□□□□ -0.43
RAB5C-204ENST00000547517 NOX5Q96PH1 765 aa12.36□□□□□ -0.43
RAB5C-204ENST00000547517 CPXM1Q96SM3 734 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms