RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 PKDCCQ504Y2 493 aa10.84□□□□□ -0.67
BEST3-208ENST00000547208 EMC10Q5UCC4 262 aa10.84□□□□□ -0.67
BEST3-208ENST00000547208 PM20D1Q6GTS8 502 aa10.84□□□□□ -0.67
BEST3-208ENST00000547208 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.84□□□□□ -0.67
BEST3-208ENST00000547208 KBTBD6Q86V97 674 aa10.84□□□□□ -0.67
BEST3-208ENST00000547208 RASSF3Q86WH2 238 aa10.84□□□□□ -0.67
BEST3-208ENST00000547208 TRIM59Q8IWR1 403 aa10.84□□□□□ -0.67
BEST3-208ENST00000547208 IL17RCQ8NAC3 791 aa10.84□□□□□ -0.67
BEST3-208ENST00000547208 KAT5Q92993 513 aa10.84□□□□□ -0.67
BEST3-208ENST00000547208 ZC3H10Q96K80 434 aaKnown RBP10.84□□□□□ -0.67
BEST3-208ENST00000547208 MED15Q96RN5 788 aa10.84□□□□□ -0.67
BEST3-208ENST00000547208 ZSWIM1Q9BR11 485 aa10.84□□□□□ -0.67
BEST3-208ENST00000547208 DNAI2Q9GZS0 605 aa10.84□□□□□ -0.67
BEST3-208ENST00000547208 ARHGEF4Q9NR80 690 aa10.84□□□□□ -0.67
BEST3-208ENST00000547208 MARK1Q9P0L2 795 aa10.84□□□□□ -0.67
BEST3-208ENST00000547208 DNMT3LQ9UJW3 386 aa10.84□□□□□ -0.67
BEST3-208ENST00000547208 NAGPAQ9UK23 515 aa10.84□□□□□ -0.67
BEST3-208ENST00000547208 TSPAN16Q9UKR8 245 aa10.84□□□□□ -0.67
BEST3-208ENST00000547208 MMP17Q9ULZ9 603 aa10.84□□□□□ -0.67
BEST3-208ENST00000547208 BICDL2A1A5D9 508 aa10.83□□□□□ -0.68
BEST3-208ENST00000547208 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.83□□□□□ -0.68
BEST3-208ENST00000547208 RNF225M0QZC1 329 aaPredicted RBP10.83□□□□□ -0.68
BEST3-208ENST00000547208 SGK1O00141 431 aa10.83□□□□□ -0.68
BEST3-208ENST00000547208 XPO1O14980 1071 aaKnown RBP10.83□□□□□ -0.68
BEST3-208ENST00000547208 TRIM24O15164 1050 aa10.83□□□□□ -0.68
BEST3-208ENST00000547208 AXIN1O15169 862 aa10.83□□□□□ -0.68
BEST3-208ENST00000547208 CACNG3O60359 315 aa10.83□□□□□ -0.68
BEST3-208ENST00000547208 ADAM23O75077 832 aa10.83□□□□□ -0.68
BEST3-208ENST00000547208 APODP05090 189 aa10.83□□□□□ -0.68
BEST3-208ENST00000547208 TBXAS1P24557 533 aaPredicted RBP10.83□□□□□ -0.68
BEST3-208ENST00000547208 GRIA2P42262 883 aa10.83□□□□□ -0.68
BEST3-208ENST00000547208 TNFRSF4P43489 277 aa10.83□□□□□ -0.68
BEST3-208ENST00000547208 PLA2G4AP47712 749 aa10.83□□□□□ -0.68
BEST3-208ENST00000547208 TKTL1P51854 596 aa10.83□□□□□ -0.68
BEST3-208ENST00000547208 BCAT1P54687 386 aa10.83□□□□□ -0.68
BEST3-208ENST00000547208 STX17P56962 302 aa10.83□□□□□ -0.68
BEST3-208ENST00000547208 PDE4CQ08493 712 aa10.83□□□□□ -0.68
BEST3-208ENST00000547208 CRY1Q16526 586 aa10.83□□□□□ -0.68
BEST3-208ENST00000547208 CCDC40Q4G0X9 1142 aa10.83□□□□□ -0.68
BEST3-208ENST00000547208 C10orf120Q5SQS8 335 aa10.83□□□□□ -0.68
BEST3-208ENST00000547208 TMEM92Q6UXU6 159 aa10.83□□□□□ -0.68
BEST3-208ENST00000547208 CEP68Q76N32 757 aa10.83□□□□□ -0.68
BEST3-208ENST00000547208 CCDC33Q8N5R6 958 aa10.83□□□□□ -0.68
BEST3-208ENST00000547208 ALLCQ8N6M5 410 aa10.83□□□□□ -0.68
BEST3-208ENST00000547208 NAT16Q8N8M0 369 aa10.83□□□□□ -0.68
BEST3-208ENST00000547208 TXNDC5Q8NBS9 432 aaKnown RBP10.83□□□□□ -0.68
BEST3-208ENST00000547208 MDGA1Q8NFP4 955 aa10.83□□□□□ -0.68
BEST3-208ENST00000547208 CCDC26Q8TAB7 109 aa10.83□□□□□ -0.68
BEST3-208ENST00000547208 TFAP2BQ92481 460 aa10.83□□□□□ -0.68
BEST3-208ENST00000547208 ZDHHC4Q9NPG8 344 aa10.83□□□□□ -0.68
BEST3-208ENST00000547208 SEMA4GQ9NTN9 838 aa10.83□□□□□ -0.68
BEST3-208ENST00000547208 NYNRINQ9P2P1 1898 aaKnown RBP10.83□□□□□ -0.68
BEST3-208ENST00000547208 CHD6Q8TD26 2715 aa10.82□□□□□ -0.68
BEST3-208ENST00000547208 DCLK1O15075 740 aa10.82□□□□□ -0.68
BEST3-208ENST00000547208 P4HA2O15460 535 aa10.82□□□□□ -0.68
BEST3-208ENST00000547208 EPN2O95208 641 aa10.82□□□□□ -0.68
BEST3-208ENST00000547208 KLF8O95600 359 aaPredicted RBP10.82□□□□□ -0.68
BEST3-208ENST00000547208 ZBED1O96006 694 aa10.82□□□□□ -0.68
BEST3-208ENST00000547208 PAEPP09466 180 aa10.82□□□□□ -0.68
BEST3-208ENST00000547208 CCDC192P0DO97 292 aa10.82□□□□□ -0.68
BEST3-208ENST00000547208 VDRP11473 427 aa10.82□□□□□ -0.68
BEST3-208ENST00000547208 HOXB3P14651 431 aaPredicted RBP10.82□□□□□ -0.68
BEST3-208ENST00000547208 TYRP14679 529 aa10.82□□□□□ -0.68
BEST3-208ENST00000547208 ZNF132P52740 706 aa10.82□□□□□ -0.68
BEST3-208ENST00000547208 YWHAGP61981 247 aaKnown RBP eCLIP10.82□□□□□ -0.68
BEST3-208ENST00000547208 UBE2HP62256 183 aa10.82□□□□□ -0.68
BEST3-208ENST00000547208 YWHAEP62258 255 aaKnown RBP10.82□□□□□ -0.68
BEST3-208ENST00000547208 LMNB2Q03252 620 aa10.82□□□□□ -0.68
BEST3-208ENST00000547208 BST2Q10589 180 aaKnown RBP10.82□□□□□ -0.68
BEST3-208ENST00000547208 KCNH2Q12809 1159 aa10.82□□□□□ -0.68
BEST3-208ENST00000547208 PAK1Q13153 545 aa10.82□□□□□ -0.68
BEST3-208ENST00000547208 CSRP2Q16527 193 aa10.82□□□□□ -0.68
BEST3-208ENST00000547208 ANO4Q32M45 955 aa10.82□□□□□ -0.68
BEST3-208ENST00000547208 PLK5Q496M5 336 aa10.82□□□□□ -0.68
BEST3-208ENST00000547208 SGO2Q562F6 1265 aa10.82□□□□□ -0.68
BEST3-208ENST00000547208 TMEM270Q6UE05 265 aa10.82□□□□□ -0.68
BEST3-208ENST00000547208 CACNA2D4Q7Z3S7 1137 aa10.82□□□□□ -0.68
BEST3-208ENST00000547208 MIB1Q86YT6 1006 aa10.82□□□□□ -0.68
BEST3-208ENST00000547208 ARHGEF19Q8IW93 802 aa10.82□□□□□ -0.68
BEST3-208ENST00000547208 TRIML1Q8N9V2 468 aa10.82□□□□□ -0.68
BEST3-208ENST00000547208 TERB1Q8NA31 727 aa10.82□□□□□ -0.68
BEST3-208ENST00000547208 UBA3Q8TBC4 463 aa10.82□□□□□ -0.68
BEST3-208ENST00000547208 NDRG1Q92597 394 aaKnown RBP10.82□□□□□ -0.68
BEST3-208ENST00000547208 LOXL4Q96JB6 756 aa10.82□□□□□ -0.68
BEST3-208ENST00000547208 CNOT6LQ96LI5 555 aaKnown RBP10.82□□□□□ -0.68
BEST3-208ENST00000547208 KREMEN1Q96MU8 473 aa10.82□□□□□ -0.68
BEST3-208ENST00000547208 NT5C1BQ96P26 610 aa10.82□□□□□ -0.68
BEST3-208ENST00000547208 ULBP1Q9BZM6 244 aa10.82□□□□□ -0.68
BEST3-208ENST00000547208 DUSP15Q9H1R2 295 aaPredicted RBP10.82□□□□□ -0.68
BEST3-208ENST00000547208 KIAA1468Q9P260 1216 aa10.82□□□□□ -0.68
BEST3-208ENST00000547208 USP18Q9UMW8 372 aa10.82□□□□□ -0.68
BEST3-208ENST00000547208 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.82□□□□□ -0.68
BEST3-208ENST00000547208 PI4KAP42356 2102 aa10.82□□□□□ -0.68
BEST3-208ENST00000547208 CNOT1A5YKK6 2376 aaKnown RBP10.82□□□□□ -0.68
BEST3-208ENST00000547208 ADAMTS9Q9P2N4 1935 aa10.82□□□□□ -0.68
BEST3-208ENST00000547208 PRR5-ARHGAP8B1AHC4 643 aa10.81□□□□□ -0.68
BEST3-208ENST00000547208 NEDD8-MDP1E9PL57 170 aa10.81□□□□□ -0.68
BEST3-208ENST00000547208 GNA14O95837 355 aa10.81□□□□□ -0.68
BEST3-208ENST00000547208 PENKP01210 267 aaPredicted RBP10.81□□□□□ -0.68
BEST3-208ENST00000547208 CALCAP01258 141 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms