RNA–Protein interactions for RNA: ENST00000546997.1

BRF1-208, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-208ENST00000546997 BCAR1P56945 870 aa17.17■□□□□ 0.34
BRF1-208ENST00000546997 MRPS35P82673 323 aaKnown RBP17.17■□□□□ 0.34
BRF1-208ENST00000546997 PPIGQ13427 754 aaKnown RBP eCLIP17.17■□□□□ 0.34
BRF1-208ENST00000546997 LBRQ14739 615 aaKnown RBP17.17■□□□□ 0.34
BRF1-208ENST00000546997 PPP1R2P3Q6NXS1 205 aa17.17■□□□□ 0.34
BRF1-208ENST00000546997 LLGL2Q6P1M3 1020 aa17.17■□□□□ 0.34
BRF1-208ENST00000546997 SPATA21Q7Z572 469 aa17.17■□□□□ 0.34
BRF1-208ENST00000546997 PHLDB2Q86SQ0 1253 aa17.17■□□□□ 0.34
BRF1-208ENST00000546997 CRYBG2Q8N1P7 616 aa17.17■□□□□ 0.34
BRF1-208ENST00000546997 FBXO25Q8TCJ0 367 aa17.17■□□□□ 0.34
BRF1-208ENST00000546997 NAF1Q96HR8 494 aaKnown RBP17.17■□□□□ 0.34
BRF1-208ENST00000546997 RTP3Q9BQQ7 232 aa17.17■□□□□ 0.34
BRF1-208ENST00000546997 CXXC1Q9P0U4 656 aaPredicted RBP17.17■□□□□ 0.34
BRF1-208ENST00000546997 TSPAN16Q9UKR8 245 aa17.17■□□□□ 0.34
BRF1-208ENST00000546997 ZMYND8Q9ULU4 1186 aaPredicted RBP17.17■□□□□ 0.34
BRF1-208ENST00000546997 PTPRDP23468 1912 aa17.17■□□□□ 0.34
BRF1-208ENST00000546997 TLDC2A0PJX2 215 aa17.17■□□□□ 0.34
BRF1-208ENST00000546997 MED7O43513 233 aa17.17■□□□□ 0.34
BRF1-208ENST00000546997 KRT16P08779 473 aa17.17■□□□□ 0.34
BRF1-208ENST00000546997 CCDC130P13994 396 aa17.17■□□□□ 0.34
BRF1-208ENST00000546997 PLTPP55058 493 aa17.17■□□□□ 0.34
BRF1-208ENST00000546997 PTP4A2Q12974 167 aa17.17■□□□□ 0.34
BRF1-208ENST00000546997 SEL1L2Q5TEA6 688 aa17.17■□□□□ 0.34
BRF1-208ENST00000546997 LIN9Q5TKA1 542 aa17.17■□□□□ 0.34
BRF1-208ENST00000546997 B3GALNT2Q8NCR0 500 aa17.17■□□□□ 0.34
BRF1-208ENST00000546997 CKAP2Q8WWK9 683 aa17.17■□□□□ 0.34
BRF1-208ENST00000546997 ZNF689Q96CS4 500 aaPredicted RBP17.17■□□□□ 0.34
BRF1-208ENST00000546997 C11orf70Q9BRQ4 267 aa17.17■□□□□ 0.34
BRF1-208ENST00000546997 TXLNGQ9NUQ3 528 aa17.17■□□□□ 0.34
BRF1-208ENST00000546997 ETAA1Q9NY74 926 aa17.17■□□□□ 0.34
BRF1-208ENST00000546997 CYTH4Q9UIA0 394 aa17.17■□□□□ 0.34
BRF1-208ENST00000546997 NLRC5Q86WI3 1866 aa17.16■□□□□ 0.34
BRF1-208ENST00000546997 ZBBXA8MT70 800 aa17.16■□□□□ 0.34
BRF1-208ENST00000546997 M0QYV0 167 aa17.16■□□□□ 0.34
BRF1-208ENST00000546997 LSM8O95777 96 aaKnown RBP17.16■□□□□ 0.34
BRF1-208ENST00000546997 CYP11A1P05108 521 aa17.16■□□□□ 0.34
BRF1-208ENST00000546997 GALTP07902 379 aa17.16■□□□□ 0.34
BRF1-208ENST00000546997 CDH5P33151 784 aaPredicted RBP17.16■□□□□ 0.34
BRF1-208ENST00000546997 C1QBPQ07021 282 aaKnown RBP17.16■□□□□ 0.34
BRF1-208ENST00000546997 GOLGA7BQ2TAP0 167 aa17.16■□□□□ 0.34
BRF1-208ENST00000546997 SPDYAQ5MJ70 313 aa17.16■□□□□ 0.34
BRF1-208ENST00000546997 MFN1Q8IWA4 741 aa17.16■□□□□ 0.34
BRF1-208ENST00000546997 BCL7CQ8WUZ0 217 aaPredicted RBP17.16■□□□□ 0.34
BRF1-208ENST00000546997 ZFAND2BQ8WV99 257 aa17.16■□□□□ 0.34
BRF1-208ENST00000546997 TMEM237Q96Q45 408 aa17.16■□□□□ 0.34
BRF1-208ENST00000546997 HTATIP2Q9BUP3 242 aa17.16■□□□□ 0.34
BRF1-208ENST00000546997 CWH43Q9H720 699 aa17.16■□□□□ 0.34
BRF1-208ENST00000546997 CRTAC1Q9NQ79 661 aa17.16■□□□□ 0.34
BRF1-208ENST00000546997 ADAM28Q9UKQ2 775 aa17.16■□□□□ 0.34
BRF1-208ENST00000546997 KIAA1257Q9ULG3 409 aa17.16■□□□□ 0.34
BRF1-208ENST00000546997 CHD7Q9P2D1 2997 aa17.16■□□□□ 0.34
BRF1-208ENST00000546997 TCEA3O75764 348 aa17.15■□□□□ 0.34
BRF1-208ENST00000546997 ALDH2P05091 517 aa17.15■□□□□ 0.34
BRF1-208ENST00000546997 FAM163BP0C2L3 166 aa17.15■□□□□ 0.34
BRF1-208ENST00000546997 TKTP29401 623 aaKnown RBP17.15■□□□□ 0.34
BRF1-208ENST00000546997 SLC1A1P43005 524 aa17.15■□□□□ 0.34
BRF1-208ENST00000546997 LHX1P48742 406 aa17.15■□□□□ 0.34
BRF1-208ENST00000546997 BIRC2Q13490 618 aa17.15■□□□□ 0.34
BRF1-208ENST00000546997 CYP1B1Q16678 543 aa17.15■□□□□ 0.34
BRF1-208ENST00000546997 TMEM240Q5SV17 173 aa17.15■□□□□ 0.34
BRF1-208ENST00000546997 PLEKHA7Q6IQ23 1121 aa17.15■□□□□ 0.34
BRF1-208ENST00000546997 LCLAT1Q6UWP7 414 aa17.15■□□□□ 0.34
BRF1-208ENST00000546997 EXOC3L1Q86VI1 746 aa17.15■□□□□ 0.34
BRF1-208ENST00000546997 ERICH1Q86X53 443 aa17.15■□□□□ 0.34
BRF1-208ENST00000546997 LMNTD2Q8IXW0 634 aa17.15■□□□□ 0.34
BRF1-208ENST00000546997 ZDHHC14Q8IZN3 488 aa17.15■□□□□ 0.34
BRF1-208ENST00000546997 AGGF1Q8N302 714 aaeCLIP17.15■□□□□ 0.34
BRF1-208ENST00000546997 UBA3Q8TBC4 463 aa17.15■□□□□ 0.34
BRF1-208ENST00000546997 ART4Q93070 314 aa17.15■□□□□ 0.34
BRF1-208ENST00000546997 TNIP3Q96KP6 325 aa17.15■□□□□ 0.34
BRF1-208ENST00000546997 LHX5Q9H2C1 402 aa17.15■□□□□ 0.34
BRF1-208ENST00000546997 MRPL47Q9HD33 250 aaKnown RBP17.15■□□□□ 0.34
BRF1-208ENST00000546997 TADA2AO75478 443 aa17.15■□□□□ 0.34
BRF1-208ENST00000546997 SKAP2O75563 359 aaPredicted RBP17.15■□□□□ 0.34
BRF1-208ENST00000546997 UNC5CO95185 931 aa17.15■□□□□ 0.34
BRF1-208ENST00000546997 FGBP02675 491 aa17.15■□□□□ 0.34
BRF1-208ENST00000546997 GNAZP19086 355 aa17.15■□□□□ 0.34
BRF1-208ENST00000546997 MAMLD1Q13495 774 aa17.15■□□□□ 0.34
BRF1-208ENST00000546997 TAF11Q15544 211 aa17.15■□□□□ 0.34
BRF1-208ENST00000546997 TTC30AQ86WT1 665 aa17.15■□□□□ 0.34
BRF1-208ENST00000546997 PRELID2Q8N945 189 aa17.15■□□□□ 0.34
BRF1-208ENST00000546997 TMEM35BQ8NCS4 154 aa17.15■□□□□ 0.34
BRF1-208ENST00000546997 OR10T2Q8NGX3 314 aa17.15■□□□□ 0.34
BRF1-208ENST00000546997 SLC2A14Q8TDB8 520 aa17.15■□□□□ 0.34
BRF1-208ENST00000546997 FBF1Q8TES7 1133 aa17.15■□□□□ 0.34
BRF1-208ENST00000546997 DYDC1Q8WWB3 177 aa17.15■□□□□ 0.34
BRF1-208ENST00000546997 B3GALT6Q96L58 329 aa17.15■□□□□ 0.34
BRF1-208ENST00000546997 TMEM175Q9BSA9 504 aa17.15■□□□□ 0.34
BRF1-208ENST00000546997 GPR62Q9BZJ7 368 aa17.15■□□□□ 0.34
BRF1-208ENST00000546997 TRIM31Q9BZY9 425 aa17.15■□□□□ 0.34
BRF1-208ENST00000546997 SEMA4AQ9H3S1 761 aa17.15■□□□□ 0.34
BRF1-208ENST00000546997 KLHL14Q9P2G3 628 aa17.15■□□□□ 0.34
BRF1-208ENST00000546997 CPSF2Q9P2I0 782 aaKnown RBP17.15■□□□□ 0.34
BRF1-208ENST00000546997 PCDHB8Q9UN66 801 aa17.15■□□□□ 0.34
BRF1-208ENST00000546997 SNX24Q9Y343 169 aa17.15■□□□□ 0.34
BRF1-208ENST00000546997 CDH23Q9H251 3354 aa17.14■□□□□ 0.33
BRF1-208ENST00000546997 PROSCO94903 275 aa17.14■□□□□ 0.33
BRF1-208ENST00000546997 LINGO3P0C6S8 592 aa17.14■□□□□ 0.33
BRF1-208ENST00000546997 PTPN1P18031 435 aaKnown RBP17.14■□□□□ 0.33
BRF1-208ENST00000546997 MMP8P22894 467 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms