RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 PRKCBP05771 671 aa7.23□□□□□ -1.25
CCDC60-205ENST00000546345 PTPN2P17706 415 aa7.23□□□□□ -1.25
CCDC60-205ENST00000546345 ETFBP38117 255 aa7.23□□□□□ -1.25
CCDC60-205ENST00000546345 NAPAP54920 295 aa7.23□□□□□ -1.25
CCDC60-205ENST00000546345 UBE2HP62256 183 aa7.23□□□□□ -1.25
CCDC60-205ENST00000546345 TUSC3Q13454 348 aa7.23□□□□□ -1.25
CCDC60-205ENST00000546345 ELF2Q15723 593 aa7.23□□□□□ -1.25
CCDC60-205ENST00000546345 TDRD10Q5VZ19 366 aaKnown RBP7.23□□□□□ -1.25
CCDC60-205ENST00000546345 NAIF1Q69YI7 327 aaPredicted RBP7.23□□□□□ -1.25
CCDC60-205ENST00000546345 C1orf228Q6PIY5 440 aa7.23□□□□□ -1.25
CCDC60-205ENST00000546345 PCSK4Q6UW60 755 aa7.23□□□□□ -1.25
CCDC60-205ENST00000546345 CCNI2Q6ZMN8 369 aaPredicted RBP7.23□□□□□ -1.25
CCDC60-205ENST00000546345 SRGAP1Q7Z6B7 1085 aa7.23□□□□□ -1.25
CCDC60-205ENST00000546345 CDR2LQ86X02 465 aaPredicted RBP7.23□□□□□ -1.25
CCDC60-205ENST00000546345 CEP57Q86XR8 500 aa7.23□□□□□ -1.25
CCDC60-205ENST00000546345 KRT222Q8N1A0 295 aa7.23□□□□□ -1.25
CCDC60-205ENST00000546345 SYNPOQ8N3V7 929 aa7.23□□□□□ -1.25
CCDC60-205ENST00000546345 GPT2Q8TD30 523 aa7.23□□□□□ -1.25
CCDC60-205ENST00000546345 LZTS2Q9BRK4 669 aa7.23□□□□□ -1.25
CCDC60-205ENST00000546345 PRDM14Q9GZV8 571 aa7.23□□□□□ -1.25
CCDC60-205ENST00000546345 C8orf33Q9H7E9 229 aaPredicted RBP7.23□□□□□ -1.25
CCDC60-205ENST00000546345 CARS2Q9HA77 564 aaKnown RBP7.23□□□□□ -1.25
CCDC60-205ENST00000546345 UBN1Q9NPG3 1134 aa7.23□□□□□ -1.25
CCDC60-205ENST00000546345 FSCN3Q9NQT6 498 aa7.23□□□□□ -1.25
CCDC60-205ENST00000546345 NRBP2Q9NSY0 501 aa7.23□□□□□ -1.25
CCDC60-205ENST00000546345 CEP72Q9P209 647 aa7.23□□□□□ -1.25
CCDC60-205ENST00000546345 EVLQ9UI08 416 aaPredicted RBP7.23□□□□□ -1.25
CCDC60-205ENST00000546345 DUSP13Q9UII6 198 aa7.23□□□□□ -1.25
CCDC60-205ENST00000546345 GIT1Q9Y2X7 761 aa7.23□□□□□ -1.25
CCDC60-205ENST00000546345 INSL5Q9Y5Q6 135 aa7.23□□□□□ -1.25
CCDC60-205ENST00000546345 V9GYY5 206 aaPredicted RBP7.23□□□□□ -1.25
CCDC60-205ENST00000546345 TEX15Q9BXT5 2789 aa7.23□□□□□ -1.25
CCDC60-205ENST00000546345 CABIN1Q9Y6J0 2220 aa7.23□□□□□ -1.25
CCDC60-205ENST00000546345 NID2Q14112 1375 aa7.22□□□□□ -1.25
CCDC60-205ENST00000546345 KNTC1P50748 2209 aa7.22□□□□□ -1.25
CCDC60-205ENST00000546345 A0A087WV48 116 aa7.22□□□□□ -1.25
CCDC60-205ENST00000546345 SHISA3A0PJX4 238 aa7.22□□□□□ -1.25
CCDC60-205ENST00000546345 OTOL1A6NHN0 477 aaPredicted RBP7.22□□□□□ -1.25
CCDC60-205ENST00000546345 H0Y626 953 aa7.22□□□□□ -1.25
CCDC60-205ENST00000546345 SH2B2O14492 632 aaPredicted RBP7.22□□□□□ -1.25
CCDC60-205ENST00000546345 MSH4O15457 936 aa7.22□□□□□ -1.25
CCDC60-205ENST00000546345 B4GALT5O43286 388 aa7.22□□□□□ -1.25
CCDC60-205ENST00000546345 TADA2AO75478 443 aa7.22□□□□□ -1.25
CCDC60-205ENST00000546345 ABLIM3O94929 683 aa7.22□□□□□ -1.25
CCDC60-205ENST00000546345 TRIM16O95361 564 aa7.22□□□□□ -1.25
CCDC60-205ENST00000546345 PRAMEF12O95522 483 aa7.22□□□□□ -1.25
CCDC60-205ENST00000546345 ESR1P03372 595 aa7.22□□□□□ -1.25
CCDC60-205ENST00000546345 ARF4P18085 180 aaPredicted RBP7.22□□□□□ -1.25
CCDC60-205ENST00000546345 TKTP29401 623 aaKnown RBP7.22□□□□□ -1.25
CCDC60-205ENST00000546345 KPNA1P52294 538 aaPredicted RBP7.22□□□□□ -1.25
CCDC60-205ENST00000546345 CDC42EP1Q00587 391 aa7.22□□□□□ -1.25
CCDC60-205ENST00000546345 PTH1RQ03431 593 aa7.22□□□□□ -1.25
CCDC60-205ENST00000546345 SRSF1Q07955 248 aaKnown RBP eCLIP7.22□□□□□ -1.25
CCDC60-205ENST00000546345 KARSQ15046 597 aaKnown RBP7.22□□□□□ -1.25
CCDC60-205ENST00000546345 TEAD2Q15562 447 aa7.22□□□□□ -1.25
CCDC60-205ENST00000546345 GAB4Q2WGN9 574 aa7.22□□□□□ -1.25
CCDC60-205ENST00000546345 ANKRD39Q53RE8 183 aa7.22□□□□□ -1.25
CCDC60-205ENST00000546345 PRR16Q569H4 304 aa7.22□□□□□ -1.25
CCDC60-205ENST00000546345 XKR3Q5GH77 459 aa7.22□□□□□ -1.25
CCDC60-205ENST00000546345 TMEM196Q5HYL7 178 aa7.22□□□□□ -1.25
CCDC60-205ENST00000546345 TTC22Q5TAA0 569 aa7.22□□□□□ -1.25
CCDC60-205ENST00000546345 JAKMIP3Q5VZ66 844 aa7.22□□□□□ -1.25
CCDC60-205ENST00000546345 SLC8B1Q6J4K2 584 aa7.22□□□□□ -1.25
CCDC60-205ENST00000546345 SLC23A3Q6PIS1 610 aa7.22□□□□□ -1.25
CCDC60-205ENST00000546345 RTL10Q7L3V2 364 aa7.22□□□□□ -1.25
CCDC60-205ENST00000546345 TMC3Q7Z5M5 1100 aa7.22□□□□□ -1.25
CCDC60-205ENST00000546345 TMC8Q8IU68 726 aa7.22□□□□□ -1.25
CCDC60-205ENST00000546345 TEX2Q8IWB9 1127 aa7.22□□□□□ -1.25
CCDC60-205ENST00000546345 CNNM3Q8NE01 707 aa7.22□□□□□ -1.25
CCDC60-205ENST00000546345 CSGALNACT1Q8TDX6 532 aa7.22□□□□□ -1.25
CCDC60-205ENST00000546345 CSRNP2Q9H175 543 aa7.22□□□□□ -1.25
CCDC60-205ENST00000546345 WRAP73Q9P2S5 460 aaPredicted RBP7.22□□□□□ -1.25
CCDC60-205ENST00000546345 DKK4Q9UBT3 224 aa7.22□□□□□ -1.25
CCDC60-205ENST00000546345 INVSQ9Y283 1065 aa7.22□□□□□ -1.25
CCDC60-205ENST00000546345 ATXN2Q99700 1313 aaKnown RBP7.22□□□□□ -1.25
CCDC60-205ENST00000546345 SYCE3A1L190 88 aa7.21□□□□□ -1.26
CCDC60-205ENST00000546345 TMEM189-UBE2V1I3L0A0 370 aa7.21□□□□□ -1.26
CCDC60-205ENST00000546345 PYCARD-AS1I3L0S3 204 aa7.21□□□□□ -1.26
CCDC60-205ENST00000546345 I3L4J1 428 aa7.21□□□□□ -1.26
CCDC60-205ENST00000546345 TULP2O00295 520 aa7.21□□□□□ -1.26
CCDC60-205ENST00000546345 SIGLEC6O43699 453 aa7.21□□□□□ -1.26
CCDC60-205ENST00000546345 PSMD10O75832 226 aa7.21□□□□□ -1.26
CCDC60-205ENST00000546345 RHOBTB1O94844 696 aa7.21□□□□□ -1.26
CCDC60-205ENST00000546345 VNN2O95498 520 aa7.21□□□□□ -1.26
CCDC60-205ENST00000546345 EGFP01133 1207 aa7.21□□□□□ -1.26
CCDC60-205ENST00000546345 LRG1P02750 347 aa7.21□□□□□ -1.26
CCDC60-205ENST00000546345 TPM1P09493 284 aa7.21□□□□□ -1.26
CCDC60-205ENST00000546345 ENGP17813 658 aa7.21□□□□□ -1.26
CCDC60-205ENST00000546345 CIITAP33076 1130 aa7.21□□□□□ -1.26
CCDC60-205ENST00000546345 GNAQP50148 359 aa7.21□□□□□ -1.26
CCDC60-205ENST00000546345 JAK3P52333 1124 aa7.21□□□□□ -1.26
CCDC60-205ENST00000546345 NPEPPSP55786 919 aa7.21□□□□□ -1.26
CCDC60-205ENST00000546345 SLC7A5Q01650 507 aa7.21□□□□□ -1.26
CCDC60-205ENST00000546345 MBTD1Q05BQ5 628 aa7.21□□□□□ -1.26
CCDC60-205ENST00000546345 SPIRE1Q08AE8 756 aa7.21□□□□□ -1.26
CCDC60-205ENST00000546345 LAMTOR4Q0VGL1 99 aa7.21□□□□□ -1.26
CCDC60-205ENST00000546345 TRDNQ13061 729 aa7.21□□□□□ -1.26
CCDC60-205ENST00000546345 SART3Q15020 963 aaKnown RBP7.21□□□□□ -1.26
CCDC60-205ENST00000546345 TRIM61Q5EBN2 209 aa7.21□□□□□ -1.26
CCDC60-205ENST00000546345 TEX35Q5T0J7 233 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms