RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 ACOT1Q86TX2 421 aa16.39■□□□□ 0.21
LDLR-204ENST00000545707 E2F7Q96AV8 911 aa16.39■□□□□ 0.21
LDLR-204ENST00000545707 CLPTM1LQ96KA5 538 aa16.39■□□□□ 0.21
LDLR-204ENST00000545707 PDZD7Q9H5P4 517 aa16.39■□□□□ 0.21
LDLR-204ENST00000545707 BARX2Q9UMQ3 279 aaPredicted RBP16.39■□□□□ 0.21
LDLR-204ENST00000545707 DPPA5A6NC42 116 aa16.39■□□□□ 0.21
LDLR-204ENST00000545707 HCRTO43612 131 aa16.39■□□□□ 0.21
LDLR-204ENST00000545707 LINGO3P0C6S8 592 aa16.39■□□□□ 0.21
LDLR-204ENST00000545707 AMPD1P23109 780 aa16.39■□□□□ 0.21
LDLR-204ENST00000545707 YY1P25490 414 aa16.39■□□□□ 0.21
LDLR-204ENST00000545707 CCNHP51946 323 aaPredicted RBP16.39■□□□□ 0.21
LDLR-204ENST00000545707 CRADDP78560 199 aa16.39■□□□□ 0.21
LDLR-204ENST00000545707 KDSRQ06136 332 aa16.39■□□□□ 0.21
LDLR-204ENST00000545707 Q3C1V9 767 aa16.39■□□□□ 0.21
LDLR-204ENST00000545707 PLPPR4Q7Z2D5 763 aa16.39■□□□□ 0.21
LDLR-204ENST00000545707 NUDCD3Q8IVD9 361 aa16.39■□□□□ 0.21
LDLR-204ENST00000545707 MAP7D3Q8IWC1 876 aa16.39■□□□□ 0.21
LDLR-204ENST00000545707 NDUFAF2Q8N183 169 aa16.39■□□□□ 0.21
LDLR-204ENST00000545707 KHSRPQ92945 711 aaKnown RBP eCLIP16.39■□□□□ 0.21
LDLR-204ENST00000545707 KLC2Q9H0B6 622 aa16.39■□□□□ 0.21
LDLR-204ENST00000545707 GBA2Q9HCG7 927 aaPredicted RBP16.39■□□□□ 0.21
LDLR-204ENST00000545707 TXNRD2Q9NNW7 524 aa16.39■□□□□ 0.21
LDLR-204ENST00000545707 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.39■□□□□ 0.211e-6■■■□□ 15.9
LDLR-204ENST00000545707 MFHAS1Q9Y4C4 1052 aa16.39■□□□□ 0.21
LDLR-204ENST00000545707 I3L4J1 428 aa16.38■□□□□ 0.21
LDLR-204ENST00000545707 FZD9O00144 591 aa16.38■□□□□ 0.21
LDLR-204ENST00000545707 GAS2O43903 313 aaKnown RBP16.38■□□□□ 0.21
LDLR-204ENST00000545707 HNRNPCL1O60812 293 aaKnown RBP16.38■□□□□ 0.21
LDLR-204ENST00000545707 GABBR2O75899 941 aa16.38■□□□□ 0.21
LDLR-204ENST00000545707 LUC7L3O95232 432 aaKnown RBP16.38■□□□□ 0.21
LDLR-204ENST00000545707 RARBP10826 455 aa16.38■□□□□ 0.21
LDLR-204ENST00000545707 ARF4P18085 180 aaPredicted RBP16.38■□□□□ 0.21
LDLR-204ENST00000545707 PGM1P36871 562 aa16.38■□□□□ 0.21
LDLR-204ENST00000545707 AQP5P55064 265 aa16.38■□□□□ 0.21
LDLR-204ENST00000545707 THOC5Q13769 683 aaKnown RBP16.38■□□□□ 0.21
LDLR-204ENST00000545707 TMEM132DQ14C87 1099 aa16.38■□□□□ 0.21
LDLR-204ENST00000545707 AMHR2Q16671 573 aa16.38■□□□□ 0.21
LDLR-204ENST00000545707 TTC30AQ86WT1 665 aa16.38■□□□□ 0.21
LDLR-204ENST00000545707 TEX9Q8N6V9 391 aa16.38■□□□□ 0.21
LDLR-204ENST00000545707 PDCD7Q8N8D1 485 aaKnown RBP16.38■□□□□ 0.21
LDLR-204ENST00000545707 CLEC4CQ8WTT0 213 aa16.38■□□□□ 0.21
LDLR-204ENST00000545707 UCMAQ8WVF2 138 aa16.38■□□□□ 0.21
LDLR-204ENST00000545707 PNPLA8Q9NP80 782 aa16.38■□□□□ 0.21
LDLR-204ENST00000545707 ZFATQ9P243 1243 aa16.38■□□□□ 0.21
LDLR-204ENST00000545707 WASF2Q9Y6W5 498 aa16.38■□□□□ 0.21
LDLR-204ENST00000545707 A6NHS1 94 aa16.38■□□□□ 0.21
LDLR-204ENST00000545707 PPEF2O14830 753 aa16.38■□□□□ 0.21
LDLR-204ENST00000545707 NVLO15381 856 aaKnown RBP16.38■□□□□ 0.21
LDLR-204ENST00000545707 SPAG6O75602 509 aa16.38■□□□□ 0.21
LDLR-204ENST00000545707 PSMG1O95456 288 aa16.38■□□□□ 0.21
LDLR-204ENST00000545707 APOEP02649 317 aa16.38■□□□□ 0.21
LDLR-204ENST00000545707 TXNP10599 105 aaKnown RBP16.38■□□□□ 0.21
LDLR-204ENST00000545707 INSRRP14616 1297 aa16.38■□□□□ 0.21
LDLR-204ENST00000545707 GCKP35557 465 aa16.38■□□□□ 0.21
LDLR-204ENST00000545707 ALDH18A1P54886 795 aaKnown RBP16.38■□□□□ 0.21
LDLR-204ENST00000545707 C16orf46Q6P387 395 aa16.38■□□□□ 0.21
LDLR-204ENST00000545707 LCLAT1Q6UWP7 414 aa16.38■□□□□ 0.21
LDLR-204ENST00000545707 ZNF534Q76KX8 674 aa16.38■□□□□ 0.21
LDLR-204ENST00000545707 FAM161BQ96MY7 647 aa16.38■□□□□ 0.21
LDLR-204ENST00000545707 MMP19Q99542 508 aa16.38■□□□□ 0.21
LDLR-204ENST00000545707 MRPL45Q9BRJ2 306 aaKnown RBP16.38■□□□□ 0.21
LDLR-204ENST00000545707 YIPF3Q9GZM5 350 aa16.38■□□□□ 0.21
LDLR-204ENST00000545707 CORO1CQ9ULV4 474 aaPredicted RBP16.38■□□□□ 0.21
LDLR-204ENST00000545707 AKT3Q9Y243 479 aa16.38■□□□□ 0.21
LDLR-204ENST00000545707 EVPLQ92817 2033 aa16.37■□□□□ 0.21
LDLR-204ENST00000545707 C22orf31O95567 290 aa16.37■□□□□ 0.21
LDLR-204ENST00000545707 PRKCHP24723 683 aa16.37■□□□□ 0.21
LDLR-204ENST00000545707 ADORA2AP29274 412 aa16.37■□□□□ 0.21
LDLR-204ENST00000545707 KRT72Q14CN4 511 aa16.37■□□□□ 0.21
LDLR-204ENST00000545707 OLFML1Q6UWY5 402 aa16.37■□□□□ 0.21
LDLR-204ENST00000545707 EP400NLQ6ZTU2 488 aa16.37■□□□□ 0.21
LDLR-204ENST00000545707 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.37■□□□□ 0.21
LDLR-204ENST00000545707 SCG3Q8WXD2 468 aaKnown RBP16.37■□□□□ 0.21
LDLR-204ENST00000545707 ZNF333Q96JL9 665 aa16.37■□□□□ 0.21
LDLR-204ENST00000545707 SIGLEC10Q96LC7 697 aa16.37■□□□□ 0.21
LDLR-204ENST00000545707 EBF4Q9BQW3 602 aa16.37■□□□□ 0.21
LDLR-204ENST00000545707 TUBB6Q9BUF5 446 aa16.37■□□□□ 0.21
LDLR-204ENST00000545707 NT5C1AQ9BXI3 368 aa16.37■□□□□ 0.21
LDLR-204ENST00000545707 CYP3A43Q9HB55 503 aa16.37■□□□□ 0.21
LDLR-204ENST00000545707 DPP3Q9NY33 737 aa16.37■□□□□ 0.21
LDLR-204ENST00000545707 STOML1Q9UBI4 398 aa16.37■□□□□ 0.21
LDLR-204ENST00000545707 NME7Q9Y5B8 376 aa16.37■□□□□ 0.21
LDLR-204ENST00000545707 ANK1P16157 1881 aa16.37■□□□□ 0.21
LDLR-204ENST00000545707 IRF6O14896 467 aa16.37■□□□□ 0.21
LDLR-204ENST00000545707 CYP2F1P24903 491 aa16.37■□□□□ 0.21
LDLR-204ENST00000545707 SDC4P31431 198 aa16.37■□□□□ 0.21
LDLR-204ENST00000545707 GMPRP36959 345 aa16.37■□□□□ 0.21
LDLR-204ENST00000545707 HDAC4P56524 1084 aa16.37■□□□□ 0.21
LDLR-204ENST00000545707 BOLA3Q53S33 107 aa16.37■□□□□ 0.21
LDLR-204ENST00000545707 NOL9Q5SY16 702 aaKnown RBP16.37■□□□□ 0.21
LDLR-204ENST00000545707 RBM15BQ8NDT2 890 aaKnown RBP16.37■□□□□ 0.21
LDLR-204ENST00000545707 SHKBP1Q8TBC3 707 aa16.37■□□□□ 0.21
LDLR-204ENST00000545707 SYT15Q9BQS2 421 aa16.37■□□□□ 0.21
LDLR-204ENST00000545707 SMARCAD1Q9H4L7 1026 aa16.37■□□□□ 0.21
LDLR-204ENST00000545707 DHX35Q9H5Z1 703 aaKnown RBP16.37■□□□□ 0.21
LDLR-204ENST00000545707 PRMT7Q9NVM4 692 aaPredicted RBP16.37■□□□□ 0.21
LDLR-204ENST00000545707 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.36■□□□□ 0.21
LDLR-204ENST00000545707 DCAF8L1A6NGE4 600 aa16.36■□□□□ 0.21
LDLR-204ENST00000545707 PAPSS1O43252 624 aaPredicted RBP16.36■□□□□ 0.21
LDLR-204ENST00000545707 MAP3K13O43283 966 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms