RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 SCD5Q86SK9 330 aa20.9■□□□□ 0.94
CHD4-213ENST00000545584 RASSF3Q86WH2 238 aa20.9■□□□□ 0.94
CHD4-213ENST00000545584 MIB1Q86YT6 1006 aa20.9■□□□□ 0.94
CHD4-213ENST00000545584 TERB1Q8NA31 727 aa20.9■□□□□ 0.94
CHD4-213ENST00000545584 TPSD1Q9BZJ3 242 aa20.9■□□□□ 0.94
CHD4-213ENST00000545584 DUSP15Q9H1R2 295 aaPredicted RBP20.9■□□□□ 0.94
CHD4-213ENST00000545584 DNAJC17Q9NVM6 304 aaKnown RBP20.9■□□□□ 0.94
CHD4-213ENST00000545584 HESX1Q9UBX0 185 aa20.9■□□□□ 0.94
CHD4-213ENST00000545584 RASAL2Q9UJF2 1139 aa20.9■□□□□ 0.94
CHD4-213ENST00000545584 EML5Q05BV3 1969 aa20.9■□□□□ 0.94
CHD4-213ENST00000545584 CACNA1AO00555 2505 aa20.89■□□□□ 0.94
CHD4-213ENST00000545584 MED19A0JLT2 244 aaPredicted RBP20.89■□□□□ 0.93
CHD4-213ENST00000545584 BICDL2A1A5D9 508 aa20.89■□□□□ 0.93
CHD4-213ENST00000545584 SGK1O00141 431 aa20.89■□□□□ 0.93
CHD4-213ENST00000545584 SLC30A4O14863 429 aa20.89■□□□□ 0.93
CHD4-213ENST00000545584 DCLK1O15075 740 aa20.89■□□□□ 0.93
CHD4-213ENST00000545584 GREM1O60565 184 aa20.89■□□□□ 0.93
CHD4-213ENST00000545584 CD19P15391 556 aa20.89■□□□□ 0.93
CHD4-213ENST00000545584 BCAT1P54687 386 aa20.89■□□□□ 0.93
CHD4-213ENST00000545584 LRMPQ12912 555 aa20.89■□□□□ 0.93
CHD4-213ENST00000545584 GOLGA7BQ2TAP0 167 aa20.89■□□□□ 0.93
CHD4-213ENST00000545584 C10orf76Q5T2E6 689 aa20.89■□□□□ 0.93
CHD4-213ENST00000545584 TMEM92Q6UXU6 159 aa20.89■□□□□ 0.93
CHD4-213ENST00000545584 RSRC2Q7L4I2 434 aaKnown RBP20.89■□□□□ 0.93
CHD4-213ENST00000545584 PHTF2Q8N3S3 785 aa20.89■□□□□ 0.93
CHD4-213ENST00000545584 BCCIPQ9P287 314 aaKnown RBP eCLIP20.89■□□□□ 0.93
CHD4-213ENST00000545584 STRIP2Q9ULQ0 834 aa20.89■□□□□ 0.93
CHD4-213ENST00000545584 ZNF510Q9Y2H8 683 aa20.89■□□□□ 0.93
CHD4-213ENST00000545584 DCDC2BA2VCK2 349 aa20.88■□□□□ 0.93
CHD4-213ENST00000545584 TYRP14679 529 aa20.88■□□□□ 0.93
CHD4-213ENST00000545584 MPLP40238 635 aa20.88■□□□□ 0.93
CHD4-213ENST00000545584 FMO5P49326 533 aa20.88■□□□□ 0.93
CHD4-213ENST00000545584 TKTL1P51854 596 aa20.88■□□□□ 0.93
CHD4-213ENST00000545584 EFEMP1Q12805 493 aa20.88■□□□□ 0.93
CHD4-213ENST00000545584 CCDC6Q16204 474 aa20.88■□□□□ 0.93
CHD4-213ENST00000545584 ZNF513Q8N8E2 541 aaPredicted RBP20.88■□□□□ 0.93
CHD4-213ENST00000545584 MDGA1Q8NFP4 955 aa20.88■□□□□ 0.93
CHD4-213ENST00000545584 NELFBQ8WX92 580 aa20.88■□□□□ 0.93
CHD4-213ENST00000545584 NT5C1BQ96P26 610 aa20.88■□□□□ 0.93
CHD4-213ENST00000545584 DCLK3Q9C098 648 aa20.88■□□□□ 0.93
CHD4-213ENST00000545584 LRRC4Q9HBW1 653 aa20.88■□□□□ 0.93
CHD4-213ENST00000545584 VPS45Q9NRW7 570 aa20.88■□□□□ 0.93
CHD4-213ENST00000545584 MARK1Q9P0L2 795 aa20.88■□□□□ 0.93
CHD4-213ENST00000545584 TSPAN16Q9UKR8 245 aa20.88■□□□□ 0.93
CHD4-213ENST00000545584 KIAA1257Q9ULG3 409 aa20.88■□□□□ 0.93
CHD4-213ENST00000545584 CIZ1Q9ULV3 898 aaPredicted RBP20.88■□□□□ 0.93
CHD4-213ENST00000545584 INVSQ9Y283 1065 aa20.88■□□□□ 0.93
CHD4-213ENST00000545584 XPO1O14980 1071 aaKnown RBP20.87■□□□□ 0.93
CHD4-213ENST00000545584 CACNG3O60359 315 aa20.87■□□□□ 0.93
CHD4-213ENST00000545584 STC2O76061 302 aa20.87■□□□□ 0.93
CHD4-213ENST00000545584 VDRP11473 427 aa20.87■□□□□ 0.93
CHD4-213ENST00000545584 CD44P16070 742 aaKnown RBP20.87■□□□□ 0.93
CHD4-213ENST00000545584 YWHAGP61981 247 aaKnown RBP eCLIP20.87■□□□□ 0.93
CHD4-213ENST00000545584 CREB5Q02930 508 aa20.87■□□□□ 0.93
CHD4-213ENST00000545584 BST2Q10589 180 aaKnown RBP20.87■□□□□ 0.93
CHD4-213ENST00000545584 SF3A2Q15428 464 aaKnown RBP20.87■□□□□ 0.93
CHD4-213ENST00000545584 RAB41Q5JT25 222 aa20.87■□□□□ 0.93
CHD4-213ENST00000545584 PGBD3Q8N328 593 aa20.87■□□□□ 0.93
CHD4-213ENST00000545584 SPACA7Q96KW9 195 aa20.87■□□□□ 0.93
CHD4-213ENST00000545584 PMM2O15305 246 aa20.86■□□□□ 0.93
CHD4-213ENST00000545584 ZBTB24O43167 697 aaPredicted RBP20.86■□□□□ 0.93
CHD4-213ENST00000545584 GDF9O60383 454 aa20.86■□□□□ 0.93
CHD4-213ENST00000545584 ZBED1O96006 694 aa20.86■□□□□ 0.93
CHD4-213ENST00000545584 HNRNPLP14866 589 aaKnown RBP eCLIP20.86■□□□□ 0.93
CHD4-213ENST00000545584 CHKAP35790 457 aa20.86■□□□□ 0.93
CHD4-213ENST00000545584 PDE4CQ08493 712 aa20.86■□□□□ 0.93
CHD4-213ENST00000545584 BYSLQ13895 437 aaKnown RBP20.86■□□□□ 0.93
CHD4-213ENST00000545584 PLA2G2CQ5R387 149 aa20.86■□□□□ 0.93
CHD4-213ENST00000545584 IL31Q6EBC2 164 aa20.86■□□□□ 0.93
CHD4-213ENST00000545584 SDE2Q6IQ49 451 aa20.86■□□□□ 0.93
CHD4-213ENST00000545584 TTI2Q6NXR4 508 aa20.86■□□□□ 0.93
CHD4-213ENST00000545584 FOXR2Q6PJQ5 311 aa20.86■□□□□ 0.93
CHD4-213ENST00000545584 Q6ZNB5 142 aa20.86■□□□□ 0.93
CHD4-213ENST00000545584 IPO9Q96P70 1041 aaKnown RBP20.86■□□□□ 0.93
CHD4-213ENST00000545584 ZDHHC4Q9NPG8 344 aa20.86■□□□□ 0.93
CHD4-213ENST00000545584 MARCH2Q9P0N8 246 aa20.86■□□□□ 0.93
CHD4-213ENST00000545584 CTNND2Q9UQB3 1225 aa20.86■□□□□ 0.93
CHD4-213ENST00000545584 STARD13Q9Y3M8 1113 aa20.86■□□□□ 0.93
CHD4-213ENST00000545584 TCRBV21S2A2A0A5A6 115 aa20.85■□□□□ 0.93
CHD4-213ENST00000545584 PPP1R3GB7ZBB8 358 aa20.85■□□□□ 0.93
CHD4-213ENST00000545584 BIN1O00499 593 aa20.85■□□□□ 0.93
CHD4-213ENST00000545584 P4HA2O15460 535 aa20.85■□□□□ 0.93
CHD4-213ENST00000545584 ADAM23O75077 832 aa20.85■□□□□ 0.93
CHD4-213ENST00000545584 GNA14O95837 355 aa20.85■□□□□ 0.93
CHD4-213ENST00000545584 HMBSP08397 361 aa20.85■□□□□ 0.93
CHD4-213ENST00000545584 CHRM1P11229 460 aaPredicted RBP20.85■□□□□ 0.93
CHD4-213ENST00000545584 DGKGP49619 791 aa20.85■□□□□ 0.93
CHD4-213ENST00000545584 MORC3Q14149 939 aa20.85■□□□□ 0.93
CHD4-213ENST00000545584 PMS2CLQ68D20 193 aa20.85■□□□□ 0.93
CHD4-213ENST00000545584 PM20D1Q6GTS8 502 aa20.85■□□□□ 0.93
CHD4-213ENST00000545584 TMEM270Q6UE05 265 aa20.85■□□□□ 0.93
CHD4-213ENST00000545584 SIX6OS1Q8N1H7 587 aa20.85■□□□□ 0.93
CHD4-213ENST00000545584 PPM1KQ8N3J5 372 aa20.85■□□□□ 0.93
CHD4-213ENST00000545584 HMGB4Q8WW32 186 aa20.85■□□□□ 0.93
CHD4-213ENST00000545584 DDX1Q92499 740 aaKnown RBP20.85■□□□□ 0.93
CHD4-213ENST00000545584 ULBP1Q9BZM6 244 aa20.85■□□□□ 0.93
CHD4-213ENST00000545584 PCDHB4Q9Y5E5 795 aa20.85■□□□□ 0.93
CHD4-213ENST00000545584 MYO18AQ92614 2054 aaKnown RBP20.85■□□□□ 0.93
CHD4-213ENST00000545584 SLC12A8A0AV02 714 aa20.84■□□□□ 0.93
CHD4-213ENST00000545584 TRIM24O15164 1050 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms