RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 LTB4R2Q9NPC1 389 aa8.18□□□□□ -1.1
SNHG1-223ENST00000545440 CRTAC1Q9NQ79 661 aa8.18□□□□□ -1.1
SNHG1-223ENST00000545440 HEBP1Q9NRV9 189 aa8.18□□□□□ -1.1
SNHG1-223ENST00000545440 RMND1Q9NWS8 449 aa8.18□□□□□ -1.1
SNHG1-223ENST00000545440 GGT7Q9UJ14 662 aa8.18□□□□□ -1.1
SNHG1-223ENST00000545440 GTF3C4Q9UKN8 822 aa8.18□□□□□ -1.1
SNHG1-223ENST00000545440 MRPS17Q9Y2R5 130 aaKnown RBP8.18□□□□□ -1.1
SNHG1-223ENST00000545440 MYO18AQ92614 2054 aaKnown RBP8.18□□□□□ -1.1
SNHG1-223ENST00000545440 USP34Q70CQ2 3546 aa8.17□□□□□ -1.1
SNHG1-223ENST00000545440 PROB1E7EW31 1015 aa8.17□□□□□ -1.1
SNHG1-223ENST00000545440 MAN2B1O00754 1011 aa8.17□□□□□ -1.1
SNHG1-223ENST00000545440 ZNF263O14978 683 aa8.17□□□□□ -1.1
SNHG1-223ENST00000545440 CHADO15335 359 aa8.17□□□□□ -1.1
SNHG1-223ENST00000545440 ATP2C2O75185 946 aa8.17□□□□□ -1.1
SNHG1-223ENST00000545440 TADA3O75528 432 aa8.17□□□□□ -1.1
SNHG1-223ENST00000545440 PRAMEF12O95522 483 aa8.17□□□□□ -1.1
SNHG1-223ENST00000545440 CST3P01034 146 aaPredicted RBP8.17□□□□□ -1.1
SNHG1-223ENST00000545440 C4BPAP04003 597 aaKnown RBP8.17□□□□□ -1.1
SNHG1-223ENST00000545440 DCNP07585 359 aaKnown RBP8.17□□□□□ -1.1
SNHG1-223ENST00000545440 P4HA1P13674 534 aa8.17□□□□□ -1.1
SNHG1-223ENST00000545440 GLULP15104 373 aa8.17□□□□□ -1.1
SNHG1-223ENST00000545440 ITPKAP23677 461 aa8.17□□□□□ -1.1
SNHG1-223ENST00000545440 LMO2P25791 158 aa8.17□□□□□ -1.1
SNHG1-223ENST00000545440 RPL13P26373 211 aaKnown RBP8.17□□□□□ -1.1
SNHG1-223ENST00000545440 GNL1P36915 607 aaPredicted RBP8.17□□□□□ -1.1
SNHG1-223ENST00000545440 RPS9P46781 194 aaKnown RBP8.17□□□□□ -1.1
SNHG1-223ENST00000545440 CDR1P51861 262 aa8.17□□□□□ -1.1
SNHG1-223ENST00000545440 CYP4F8P98187 520 aa8.17□□□□□ -1.1
SNHG1-223ENST00000545440 UBXN2BQ14CS0 331 aa8.17□□□□□ -1.1
SNHG1-223ENST00000545440 ANGPT1Q15389 498 aa8.17□□□□□ -1.1
SNHG1-223ENST00000545440 EDRF1Q3B7T1 1238 aa8.17□□□□□ -1.1
SNHG1-223ENST00000545440 ZACNQ401N2 412 aa8.17□□□□□ -1.1
SNHG1-223ENST00000545440 ARHGAP29Q52LW3 1261 aa8.17□□□□□ -1.1
SNHG1-223ENST00000545440 COBLL1Q53SF7 1204 aa8.17□□□□□ -1.1
SNHG1-223ENST00000545440 ZNF667Q5HYK9 610 aa8.17□□□□□ -1.1
SNHG1-223ENST00000545440 ZNF852Q6ZMS4 543 aa8.17□□□□□ -1.1
SNHG1-223ENST00000545440 CHSY3Q70JA7 882 aa8.17□□□□□ -1.1
SNHG1-223ENST00000545440 INTS8Q75QN2 995 aaKnown RBP8.17□□□□□ -1.1
SNHG1-223ENST00000545440 YAF2Q8IY57 180 aa8.17□□□□□ -1.1
SNHG1-223ENST00000545440 CMTM8Q8IZV2 173 aa8.17□□□□□ -1.1
SNHG1-223ENST00000545440 IL22RA1Q8N6P7 574 aa8.17□□□□□ -1.1
SNHG1-223ENST00000545440 CELF5Q8N6W0 485 aaKnown RBP8.17□□□□□ -1.1
SNHG1-223ENST00000545440 B3GALNT2Q8NCR0 500 aa8.17□□□□□ -1.1
SNHG1-223ENST00000545440 MRPS31Q92665 395 aaKnown RBP8.17□□□□□ -1.1
SNHG1-223ENST00000545440 TAF4BQ92750 862 aa8.17□□□□□ -1.1
SNHG1-223ENST00000545440 CLDN23Q96B33 292 aa8.17□□□□□ -1.1
SNHG1-223ENST00000545440 SPATA17Q96L03 361 aa8.17□□□□□ -1.1
SNHG1-223ENST00000545440 TIGD1Q96MW7 591 aa8.17□□□□□ -1.1
SNHG1-223ENST00000545440 GSDMAQ96QA5 445 aa8.17□□□□□ -1.1
SNHG1-223ENST00000545440 MRPL45Q9BRJ2 306 aaKnown RBP8.17□□□□□ -1.1
SNHG1-223ENST00000545440 IER2Q9BTL4 223 aa8.17□□□□□ -1.1
SNHG1-223ENST00000545440 ELOVL4Q9GZR5 314 aa8.17□□□□□ -1.1
SNHG1-223ENST00000545440 SNX25Q9H3E2 840 aa8.17□□□□□ -1.1
SNHG1-223ENST00000545440 CCSER2Q9H7U1 834 aa8.17□□□□□ -1.1
SNHG1-223ENST00000545440 FAM86C1Q9NVL1 165 aa8.17□□□□□ -1.1
SNHG1-223ENST00000545440 EHD2Q9NZN4 543 aa8.17□□□□□ -1.1
SNHG1-223ENST00000545440 MAGEC2Q9UBF1 373 aaPredicted RBP8.17□□□□□ -1.1
SNHG1-223ENST00000545440 NME7Q9Y5B8 376 aa8.17□□□□□ -1.1
SNHG1-223ENST00000545440 VPS13AQ96RL7 3174 aa8.17□□□□□ -1.1
SNHG1-223ENST00000545440 OTOGLQ3ZCN5 2332 aa8.17□□□□□ -1.1
SNHG1-223ENST00000545440 SHISA7A6NL88 538 aa8.16□□□□□ -1.1
SNHG1-223ENST00000545440 SLC38A8A6NNN8 435 aa8.16□□□□□ -1.1
SNHG1-223ENST00000545440 A8MXQ7 604 aa8.16□□□□□ -1.1
SNHG1-223ENST00000545440 M0R082 166 aa8.16□□□□□ -1.1
SNHG1-223ENST00000545440 NCAM2O15394 837 aa8.16□□□□□ -1.1
SNHG1-223ENST00000545440 ATP8B3O60423 1300 aa8.16□□□□□ -1.1
SNHG1-223ENST00000545440 AKAP3O75969 853 aa8.16□□□□□ -1.1
SNHG1-223ENST00000545440 CLSTN1O94985 981 aa8.16□□□□□ -1.1
SNHG1-223ENST00000545440 VNN1O95497 513 aa8.16□□□□□ -1.1
SNHG1-223ENST00000545440 ASS1P00966 412 aaKnown RBP8.16□□□□□ -1.1
SNHG1-223ENST00000545440 KRT13P13646 458 aa8.16□□□□□ -1.1
SNHG1-223ENST00000545440 PFKLP17858 780 aa8.16□□□□□ -1.1
SNHG1-223ENST00000545440 BDNFP23560 247 aa8.16□□□□□ -1.1
SNHG1-223ENST00000545440 ANXA13P27216 316 aa8.16□□□□□ -1.1
SNHG1-223ENST00000545440 GMPRP36959 345 aa8.16□□□□□ -1.1
SNHG1-223ENST00000545440 AVPR1AP37288 418 aa8.16□□□□□ -1.1
SNHG1-223ENST00000545440 PIK3CAP42336 1068 aa8.16□□□□□ -1.1
SNHG1-223ENST00000545440 GRIA4P48058 902 aa8.16□□□□□ -1.1
SNHG1-223ENST00000545440 PDE6CP51160 858 aa8.16□□□□□ -1.1
SNHG1-223ENST00000545440 VAMP7P51809 220 aa8.16□□□□□ -1.1
SNHG1-223ENST00000545440 NOP14P78316 857 aaKnown RBP8.16□□□□□ -1.1
SNHG1-223ENST00000545440 DLG4P78352 724 aa8.16□□□□□ -1.1
SNHG1-223ENST00000545440 CYP27A1Q02318 531 aa8.16□□□□□ -1.1
SNHG1-223ENST00000545440 PNOCQ13519 176 aa8.16□□□□□ -1.1
SNHG1-223ENST00000545440 ZNF268Q14587 947 aaPredicted RBP8.16□□□□□ -1.1
SNHG1-223ENST00000545440 DDR2Q16832 855 aa8.16□□□□□ -1.1
SNHG1-223ENST00000545440 SPRED3Q2MJR0 410 aa8.16□□□□□ -1.1
SNHG1-223ENST00000545440 SGSM1Q2NKQ1 1148 aa8.16□□□□□ -1.1
SNHG1-223ENST00000545440 MDH1BQ5I0G3 518 aa8.16□□□□□ -1.1
SNHG1-223ENST00000545440 SDHAF4Q5VUM1 108 aa8.16□□□□□ -1.1
SNHG1-223ENST00000545440 DENND5BQ6ZUT9 1274 aa8.16□□□□□ -1.1
SNHG1-223ENST00000545440 ALYREFQ86V81 257 aaKnown RBP8.16□□□□□ -1.1
SNHG1-223ENST00000545440 MON1AQ86VX9 555 aa8.16□□□□□ -1.1
SNHG1-223ENST00000545440 C1orf210Q8IVY1 113 aa8.16□□□□□ -1.1
SNHG1-223ENST00000545440 SCN4BQ8IWT1 228 aa8.16□□□□□ -1.1
SNHG1-223ENST00000545440 FAM186BQ8IYM0 893 aa8.16□□□□□ -1.1
SNHG1-223ENST00000545440 SVOPQ8N4V2 548 aa8.16□□□□□ -1.1
SNHG1-223ENST00000545440 STKLD1Q8NE28 680 aa8.16□□□□□ -1.1
SNHG1-223ENST00000545440 ENGASEQ8NFI3 743 aa8.16□□□□□ -1.1
SNHG1-223ENST00000545440 OR6B3Q8NGW1 331 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms