RNA–Protein interactions for RNA: ENST00000545210.5

TMEM258-208, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-208ENST00000545210 WSB2Q9NYS7 404 aaPredicted RBP12.16□□□□□ -0.46
TMEM258-208ENST00000545210 PLK2Q9NYY3 685 aa12.16□□□□□ -0.46
TMEM258-208ENST00000545210 IL37Q9NZH6 218 aa12.16□□□□□ -0.46
TMEM258-208ENST00000545210 USP36Q9P275 1121 aaKnown RBP12.16□□□□□ -0.46
TMEM258-208ENST00000545210 FBXO2Q9UK22 296 aaPredicted RBP12.16□□□□□ -0.46
TMEM258-208ENST00000545210 NFE2L3Q9Y4A8 694 aa12.16□□□□□ -0.46
TMEM258-208ENST00000545210 CLIC4Q9Y696 253 aa12.16□□□□□ -0.46
TMEM258-208ENST00000545210 STON1Q9Y6Q2 735 aa12.16□□□□□ -0.46
TMEM258-208ENST00000545210 PLXNA2O75051 1894 aa12.16□□□□□ -0.46
TMEM258-208ENST00000545210 ATP8B3O60423 1300 aa12.15□□□□□ -0.46
TMEM258-208ENST00000545210 FLNBO75369 2602 aaKnown RBP12.15□□□□□ -0.46
TMEM258-208ENST00000545210 FAM149AA5PLN7 773 aa12.15□□□□□ -0.46
TMEM258-208ENST00000545210 GFRA2O00451 464 aa12.15□□□□□ -0.46
TMEM258-208ENST00000545210 BCAT2O15382 392 aaPredicted RBP12.15□□□□□ -0.46
TMEM258-208ENST00000545210 PRB1P04280 392 aa12.15□□□□□ -0.46
TMEM258-208ENST00000545210 FAM163BP0C2L3 166 aa12.15□□□□□ -0.46
TMEM258-208ENST00000545210 CISD3P0C7P0 127 aa12.15□□□□□ -0.46
TMEM258-208ENST00000545210 ZNF883P0CG24 379 aa12.15□□□□□ -0.46
TMEM258-208ENST00000545210 HOXD13P35453 343 aa12.15□□□□□ -0.46
TMEM258-208ENST00000545210 TXLNAP40222 546 aa12.15□□□□□ -0.46
TMEM258-208ENST00000545210 TPMTP51580 245 aa12.15□□□□□ -0.46
TMEM258-208ENST00000545210 CDH8P55286 799 aa12.15□□□□□ -0.46
TMEM258-208ENST00000545210 MYL6P60660 151 aa12.15□□□□□ -0.46
TMEM258-208ENST00000545210 NUMA1Q14980 2115 aa12.15□□□□□ -0.46
TMEM258-208ENST00000545210 SNRNP35Q16560 246 aaKnown RBP12.15□□□□□ -0.46
TMEM258-208ENST00000545210 CADM4Q8NFZ8 388 aa12.15□□□□□ -0.46
TMEM258-208ENST00000545210 ADAM32Q8TC27 787 aa12.15□□□□□ -0.46
TMEM258-208ENST00000545210 CCDC127Q96BQ5 260 aa12.15□□□□□ -0.46
TMEM258-208ENST00000545210 CDC6Q99741 560 aa12.15□□□□□ -0.46
TMEM258-208ENST00000545210 KLF16Q9BXK1 252 aaPredicted RBP12.15□□□□□ -0.46
TMEM258-208ENST00000545210 MKRN2Q9H000 416 aaKnown RBP12.15□□□□□ -0.46
TMEM258-208ENST00000545210 KIAA1586Q9HCI6 787 aa12.15□□□□□ -0.46
TMEM258-208ENST00000545210 ITM2CQ9NQX7 267 aa12.15□□□□□ -0.46
TMEM258-208ENST00000545210 KRT82Q9NSB4 513 aa12.15□□□□□ -0.46
TMEM258-208ENST00000545210 MARK1Q9P0L2 795 aa12.15□□□□□ -0.46
TMEM258-208ENST00000545210 EIF2B4Q9UI10 523 aaKnown RBP12.15□□□□□ -0.46
TMEM258-208ENST00000545210 A0A087WV48 116 aa12.14□□□□□ -0.47
TMEM258-208ENST00000545210 FAM92AA1XBS5 289 aa12.14□□□□□ -0.47
TMEM258-208ENST00000545210 FLRT2O43155 660 aa12.14□□□□□ -0.47
TMEM258-208ENST00000545210 AP1G2O75843 785 aa12.14□□□□□ -0.47
TMEM258-208ENST00000545210 BEST1O76090 585 aa12.14□□□□□ -0.47
TMEM258-208ENST00000545210 DKK1O94907 266 aa12.14□□□□□ -0.47
TMEM258-208ENST00000545210 STAT6P42226 847 aa12.14□□□□□ -0.47
TMEM258-208ENST00000545210 TRPC3Q13507 836 aa12.14□□□□□ -0.47
TMEM258-208ENST00000545210 CAMK2BQ13554 666 aa12.14□□□□□ -0.47
TMEM258-208ENST00000545210 STARD3Q14849 445 aa12.14□□□□□ -0.47
TMEM258-208ENST00000545210 IL27RAQ6UWB1 636 aa12.14□□□□□ -0.47
TMEM258-208ENST00000545210 DBX2Q6ZNG2 339 aa12.14□□□□□ -0.47
TMEM258-208ENST00000545210 METTL3Q86U44 580 aaKnown RBP12.14□□□□□ -0.47
TMEM258-208ENST00000545210 FUKQ8N0W3 1084 aa12.14□□□□□ -0.47
TMEM258-208ENST00000545210 GALNT15Q8N3T1 639 aa12.14□□□□□ -0.47
TMEM258-208ENST00000545210 ZNF516Q92618 1163 aa12.14□□□□□ -0.47
TMEM258-208ENST00000545210 SMARCD1Q96GM5 515 aa12.14□□□□□ -0.47
TMEM258-208ENST00000545210 CGRRF1Q99675 332 aa12.14□□□□□ -0.47
TMEM258-208ENST00000545210 XYLT2Q9H1B5 865 aa12.14□□□□□ -0.47
TMEM258-208ENST00000545210 SMYD3Q9H7B4 428 aa12.14□□□□□ -0.47
TMEM258-208ENST00000545210 TLR8Q9NR97 1041 aaKnown RBP12.14□□□□□ -0.47
TMEM258-208ENST00000545210 COMMD8Q9NX08 183 aa12.14□□□□□ -0.47
TMEM258-208ENST00000545210 LSM7Q9UK45 103 aaKnown RBP12.14□□□□□ -0.47
TMEM258-208ENST00000545210 SMC3Q9UQE7 1217 aa12.14□□□□□ -0.47
TMEM258-208ENST00000545210 BTBD3Q9Y2F9 522 aa12.14□□□□□ -0.47
TMEM258-208ENST00000545210 SRPRBQ9Y5M8 271 aaKnown RBP12.14□□□□□ -0.47
TMEM258-208ENST00000545210 CABIN1Q9Y6J0 2220 aa12.13□□□□□ -0.47
TMEM258-208ENST00000545210 KNL1Q8NG31 2342 aa12.13□□□□□ -0.47
TMEM258-208ENST00000545210 A0A087X0B3 334 aa12.13□□□□□ -0.47
TMEM258-208ENST00000545210 A0A1B0GVT2 93 aa12.13□□□□□ -0.47
TMEM258-208ENST00000545210 METTL12A8MUP2 240 aa12.13□□□□□ -0.47
TMEM258-208ENST00000545210 CD2BP2O95400 341 aaKnown RBP12.13□□□□□ -0.47
TMEM258-208ENST00000545210 ATP5C1P36542 298 aaKnown RBP12.13□□□□□ -0.47
TMEM258-208ENST00000545210 CSNK1EP49674 416 aaKnown RBP12.13□□□□□ -0.47
TMEM258-208ENST00000545210 CYP2J2P51589 502 aa12.13□□□□□ -0.47
TMEM258-208ENST00000545210 CYP24A1Q07973 514 aa12.13□□□□□ -0.47
TMEM258-208ENST00000545210 GOLGA8FQ08AF8 430 aa12.13□□□□□ -0.47
TMEM258-208ENST00000545210 GOLGA8DPQ0D2H9 430 aa12.13□□□□□ -0.47
TMEM258-208ENST00000545210 PSMD6Q15008 389 aa12.13□□□□□ -0.47
TMEM258-208ENST00000545210 CCDC157Q569K6 752 aa12.13□□□□□ -0.47
TMEM258-208ENST00000545210 CCDC73Q6ZRK6 1079 aa12.13□□□□□ -0.47
TMEM258-208ENST00000545210 STXBP4Q6ZWJ1 553 aa12.13□□□□□ -0.47
TMEM258-208ENST00000545210 ACOT1Q86TX2 421 aa12.13□□□□□ -0.47
TMEM258-208ENST00000545210 CACUL1Q86Y37 369 aa12.13□□□□□ -0.47
TMEM258-208ENST00000545210 TMPRSS6Q8IU80 811 aa12.13□□□□□ -0.47
TMEM258-208ENST00000545210 SCUBE3Q8IX30 993 aa12.13□□□□□ -0.47
TMEM258-208ENST00000545210 CCDC65Q8IXS2 484 aa12.13□□□□□ -0.47
TMEM258-208ENST00000545210 ZMIZ2Q8NF64 920 aa12.13□□□□□ -0.47
TMEM258-208ENST00000545210 C1orf216Q8TAB5 229 aa12.13□□□□□ -0.47
TMEM258-208ENST00000545210 ELMO3Q96BJ8 720 aa12.13□□□□□ -0.47
TMEM258-208ENST00000545210 SIPA1Q96FS4 1042 aa12.13□□□□□ -0.47
TMEM258-208ENST00000545210 P2RY11Q96G91 374 aa12.13□□□□□ -0.47
TMEM258-208ENST00000545210 TNIP3Q96KP6 325 aa12.13□□□□□ -0.47
TMEM258-208ENST00000545210 DCBLD2Q96PD2 775 aa12.13□□□□□ -0.47
TMEM258-208ENST00000545210 SMOQ99835 787 aa12.13□□□□□ -0.47
TMEM258-208ENST00000545210 FBXO44Q9H4M3 255 aa12.13□□□□□ -0.47
TMEM258-208ENST00000545210 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.13□□□□□ -0.47
TMEM258-208ENST00000545210 OSER1Q9NX31 292 aa12.13□□□□□ -0.47
TMEM258-208ENST00000545210 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.13□□□□□ -0.47
TMEM258-208ENST00000545210 PCDHGB2Q9Y5G2 931 aa12.13□□□□□ -0.47
TMEM258-208ENST00000545210 SLCO1B1Q9Y6L6 691 aa12.13□□□□□ -0.47
TMEM258-208ENST00000545210 COL5A1P20908 1838 aaPredicted RBP12.12□□□□□ -0.47
TMEM258-208ENST00000545210 MDM4O15151 490 aa12.12□□□□□ -0.47
TMEM258-208ENST00000545210 CLIC2O15247 247 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms