RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 C3orf20Q8ND61 904 aa15.14■□□□□ 0.01
TNFRSF1A-216ENST00000543995 USP13Q92995 863 aaPredicted RBP15.14■□□□□ 0.01
TNFRSF1A-216ENST00000543995 ZNF653Q96CK0 615 aa15.14■□□□□ 0.01
TNFRSF1A-216ENST00000543995 KXD1Q9BQD3 176 aa15.14■□□□□ 0.01
TNFRSF1A-216ENST00000543995 SMPD4Q9NXE4 827 aa15.14■□□□□ 0.01
TNFRSF1A-216ENST00000543995 MYO1AQ9UBC5 1043 aa15.14■□□□□ 0.01
TNFRSF1A-216ENST00000543995 LIMD1Q9UGP4 676 aa15.14■□□□□ 0.01
TNFRSF1A-216ENST00000543995 CPQQ9Y646 472 aa15.14■□□□□ 0.01
TNFRSF1A-216ENST00000543995 LOC730098B7Z3J9 87 aa15.13■□□□□ 0.01
TNFRSF1A-216ENST00000543995 ATMINO43313 823 aaPredicted RBP15.13■□□□□ 0.01
TNFRSF1A-216ENST00000543995 DAB1O75553 588 aa15.13■□□□□ 0.01
TNFRSF1A-216ENST00000543995 MYBL1P10243 752 aa15.13■□□□□ 0.01
TNFRSF1A-216ENST00000543995 KRT3P12035 628 aa15.13■□□□□ 0.01
TNFRSF1A-216ENST00000543995 WEE1P30291 646 aa15.13■□□□□ 0.01
TNFRSF1A-216ENST00000543995 VIPR2P41587 438 aa15.13■□□□□ 0.01
TNFRSF1A-216ENST00000543995 TJAP1Q5JTD0 557 aa15.13■□□□□ 0.01
TNFRSF1A-216ENST00000543995 SYPL2Q5VXT5 272 aa15.13■□□□□ 0.01
TNFRSF1A-216ENST00000543995 BEND5Q7L4P6 421 aa15.13■□□□□ 0.01
TNFRSF1A-216ENST00000543995 FGF14Q92915 247 aa15.13■□□□□ 0.01
TNFRSF1A-216ENST00000543995 E2F7Q96AV8 911 aa15.13■□□□□ 0.01
TNFRSF1A-216ENST00000543995 PARVAQ9NVD7 372 aa15.13■□□□□ 0.01
TNFRSF1A-216ENST00000543995 MARCH2Q9P0N8 246 aa15.13■□□□□ 0.01
TNFRSF1A-216ENST00000543995 CNOT8Q9UFF9 292 aaKnown RBP15.13■□□□□ 0.01
TNFRSF1A-216ENST00000543995 SFMBT1Q9UHJ3 866 aa15.13■□□□□ 0.01
TNFRSF1A-216ENST00000543995 ARHGAP26Q9UNA1 814 aa15.13■□□□□ 0.01
TNFRSF1A-216ENST00000543995 CCL26Q9Y258 94 aa15.13■□□□□ 0.01
TNFRSF1A-216ENST00000543995 NUMBLQ9Y6R0 609 aa15.13■□□□□ 0.01
TNFRSF1A-216ENST00000543995 ANKRD62A6NC57 917 aa15.12■□□□□ 0.01
TNFRSF1A-216ENST00000543995 IPO7O95373 1038 aaKnown RBP15.12■□□□□ 0.01
TNFRSF1A-216ENST00000543995 GJB6O95452 261 aa15.12■□□□□ 0.01
TNFRSF1A-216ENST00000543995 FYNP06241 537 aa15.12■□□□□ 0.01
TNFRSF1A-216ENST00000543995 PTMAP06454 111 aaKnown RBP15.12■□□□□ 0.01
TNFRSF1A-216ENST00000543995 IRF1P10914 325 aa15.12■□□□□ 0.01
TNFRSF1A-216ENST00000543995 FECHP22830 423 aa15.12■□□□□ 0.01
TNFRSF1A-216ENST00000543995 SPA17Q15506 151 aa15.12■□□□□ 0.01
TNFRSF1A-216ENST00000543995 TANGO2Q6ICL3 276 aa15.12■□□□□ 0.01
TNFRSF1A-216ENST00000543995 SH3RF2Q8TEC5 729 aa15.12■□□□□ 0.01
TNFRSF1A-216ENST00000543995 KHSRPQ92945 711 aaKnown RBP eCLIP15.12■□□□□ 0.01
TNFRSF1A-216ENST00000543995 SLC2A13Q96QE2 648 aa15.12■□□□□ 0.01
TNFRSF1A-216ENST00000543995 THAP2Q9H0W7 228 aa15.12■□□□□ 0.01
TNFRSF1A-216ENST00000543995 KIF9Q9HAQ2 790 aa15.12■□□□□ 0.01
TNFRSF1A-216ENST00000543995 TRPV4Q9HBA0 871 aa15.12■□□□□ 0.01
TNFRSF1A-216ENST00000543995 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.12■□□□□ 0.01
TNFRSF1A-216ENST00000543995 STAP1Q9ULZ2 295 aa15.12■□□□□ 0.01
TNFRSF1A-216ENST00000543995 NENFQ9UMX5 172 aa15.12■□□□□ 0.01
TNFRSF1A-216ENST00000543995 SLC12A8A0AV02 714 aa15.12■□□□□ 0.01
TNFRSF1A-216ENST00000543995 SIGLEC16A6NMB1 481 aa15.12■□□□□ 0.01
TNFRSF1A-216ENST00000543995 HEPACAM2A8MVW5 462 aa15.12■□□□□ 0.01
TNFRSF1A-216ENST00000543995 ANHXE9PGG2 379 aa15.12■□□□□ 0.01
TNFRSF1A-216ENST00000543995 LEFTY2O00292 366 aa15.12■□□□□ 0.01
TNFRSF1A-216ENST00000543995 FCARP24071 287 aa15.12■□□□□ 0.01
TNFRSF1A-216ENST00000543995 NOS2P35228 1153 aa15.12■□□□□ 0.01
TNFRSF1A-216ENST00000543995 MATKP42679 507 aa15.12■□□□□ 0.01
TNFRSF1A-216ENST00000543995 GALCP54803 685 aa15.12■□□□□ 0.01
TNFRSF1A-216ENST00000543995 COG7P83436 770 aa15.12■□□□□ 0.01
TNFRSF1A-216ENST00000543995 HTR4Q13639 388 aa15.12■□□□□ 0.01
TNFRSF1A-216ENST00000543995 MSANTD2Q6P1R3 559 aa15.12■□□□□ 0.01
TNFRSF1A-216ENST00000543995 DCUN1D2Q6PH85 259 aa15.12■□□□□ 0.01
TNFRSF1A-216ENST00000543995 DDX42Q86XP3 938 aaKnown RBP eCLIP15.12■□□□□ 0.01
TNFRSF1A-216ENST00000543995 YAF2Q8IY57 180 aa15.12■□□□□ 0.01
TNFRSF1A-216ENST00000543995 EMC1Q8N766 993 aa15.12■□□□□ 0.01
TNFRSF1A-216ENST00000543995 ADAM32Q8TC27 787 aa15.12■□□□□ 0.01
TNFRSF1A-216ENST00000543995 DQX1Q8TE96 717 aaKnown RBP15.12■□□□□ 0.01
TNFRSF1A-216ENST00000543995 RSAD2Q8WXG1 361 aa15.12■□□□□ 0.01
TNFRSF1A-216ENST00000543995 CTNNBL1Q8WYA6 563 aaPredicted RBP15.12■□□□□ 0.01
TNFRSF1A-216ENST00000543995 ELSPBP1Q96BH3 223 aa15.12■□□□□ 0.01
TNFRSF1A-216ENST00000543995 MCEEQ96PE7 176 aa15.12■□□□□ 0.01
TNFRSF1A-216ENST00000543995 KLF16Q9BXK1 252 aaPredicted RBP15.12■□□□□ 0.01
TNFRSF1A-216ENST00000543995 SMOC2Q9H3U7 446 aa15.12■□□□□ 0.01
TNFRSF1A-216ENST00000543995 KCNK12Q9HB15 430 aa15.12■□□□□ 0.01
TNFRSF1A-216ENST00000543995 GKN1Q9NS71 199 aa15.12■□□□□ 0.01
TNFRSF1A-216ENST00000543995 IGSF9Q9P2J2 1179 aa15.12■□□□□ 0.01
TNFRSF1A-216ENST00000543995 TMEM59LQ9UK28 342 aa15.12■□□□□ 0.01
TNFRSF1A-216ENST00000543995 SH3BP1Q9Y3L3 701 aa15.12■□□□□ 0.01
TNFRSF1A-216ENST00000543995 EPN1Q9Y6I3 576 aaPredicted RBP15.12■□□□□ 0.01
TNFRSF1A-216ENST00000543995 SCINQ9Y6U3 715 aa15.12■□□□□ 0.01
TNFRSF1A-216ENST00000543995 MSI1O43347 362 aaKnown RBP15.11■□□□□ 0.01
TNFRSF1A-216ENST00000543995 NRDCO43847 1150 aa15.11■□□□□ 0.01
TNFRSF1A-216ENST00000543995 ECI2O75521 394 aa15.11■□□□□ 0.01
TNFRSF1A-216ENST00000543995 NDUFA10O95299 355 aa15.11■□□□□ 0.01
TNFRSF1A-216ENST00000543995 ASGR2P07307 311 aa15.11■□□□□ 0.01
TNFRSF1A-216ENST00000543995 HMBSP08397 361 aa15.11■□□□□ 0.01
TNFRSF1A-216ENST00000543995 H2AFZP0C0S5 128 aa15.11■□□□□ 0.01
TNFRSF1A-216ENST00000543995 FLT3P36888 993 aa15.11■□□□□ 0.01
TNFRSF1A-216ENST00000543995 SULT1E1P49888 294 aa15.11■□□□□ 0.01
TNFRSF1A-216ENST00000543995 GPC5P78333 572 aa15.11■□□□□ 0.01
TNFRSF1A-216ENST00000543995 ZXDBP98169 803 aa15.11■□□□□ 0.01
TNFRSF1A-216ENST00000543995 MAMLD1Q13495 774 aa15.11■□□□□ 0.01
TNFRSF1A-216ENST00000543995 MTF1Q14872 753 aa15.11■□□□□ 0.01
TNFRSF1A-216ENST00000543995 C10orf76Q5T2E6 689 aa15.11■□□□□ 0.01
TNFRSF1A-216ENST00000543995 H2AFVQ71UI9 128 aa15.11■□□□□ 0.01
TNFRSF1A-216ENST00000543995 ARCQ7LC44 396 aa15.11■□□□□ 0.01
TNFRSF1A-216ENST00000543995 LRRC8AQ8IWT6 810 aa15.11■□□□□ 0.01
TNFRSF1A-216ENST00000543995 JOSD2Q8TAC2 188 aa15.11■□□□□ 0.01
TNFRSF1A-216ENST00000543995 BPIFB1Q8TDL5 484 aa15.11■□□□□ 0.01
TNFRSF1A-216ENST00000543995 ADAMTS19Q8TE59 1207 aa15.11■□□□□ 0.01
TNFRSF1A-216ENST00000543995 NXPE3Q969Y0 559 aa15.11■□□□□ 0.01
TNFRSF1A-216ENST00000543995 SERPINB11Q96P15 392 aa15.11■□□□□ 0.01
TNFRSF1A-216ENST00000543995 RPP25Q9BUL9 199 aaKnown RBP15.11■□□□□ 0.01
TNFRSF1A-216ENST00000543995 PACSIN1Q9BY11 444 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms