RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	SHC4	Q6S5L8	630 aa		6.85	□□□□□ -1.31
CIT-213	ENST00000543324	FOXD4L3	Q6VB84	417 aa	Predicted RBP	6.85	□□□□□ -1.31
CIT-213	ENST00000543324	CCDC73	Q6ZRK6	1079 aa		6.85	□□□□□ -1.31
CIT-213	ENST00000543324	GAREM2	Q75VX8	874 aa		6.85	□□□□□ -1.31
CIT-213	ENST00000543324	SV2B	Q7L1I2	683 aa		6.85	□□□□□ -1.31
CIT-213	ENST00000543324	DYM	Q7RTS9	669 aa		6.85	□□□□□ -1.31
CIT-213	ENST00000543324	DHX40	Q8IX18	779 aa	Known RBP	6.85	□□□□□ -1.31
CIT-213	ENST00000543324	HS6ST3	Q8IZP7	471 aa		6.85	□□□□□ -1.31
CIT-213	ENST00000543324	C1orf127	Q8N9H9	656 aa		6.85	□□□□□ -1.31
CIT-213	ENST00000543324	TSTD1	Q8NFU3	115 aa		6.85	□□□□□ -1.31
CIT-213	ENST00000543324	RPLP0P6	Q8NHW5	317 aa		6.85	□□□□□ -1.31
CIT-213	ENST00000543324	RHBDD1	Q8TEB9	315 aa		6.85	□□□□□ -1.31
CIT-213	ENST00000543324	TMEM174	Q8WUU8	243 aa		6.85	□□□□□ -1.31
CIT-213	ENST00000543324	LEO1	Q8WVC0	666 aa	Predicted RBP	6.85	□□□□□ -1.31
CIT-213	ENST00000543324	KCNE4	Q8WWG9	221 aa		6.85	□□□□□ -1.31
CIT-213	ENST00000543324	PSMG2	Q969U7	264 aa		6.85	□□□□□ -1.31
CIT-213	ENST00000543324	RSPRY1	Q96DX4	576 aa		6.85	□□□□□ -1.31
CIT-213	ENST00000543324	ZSWIM3	Q96MP5	696 aa		6.85	□□□□□ -1.31
CIT-213	ENST00000543324	BPIFA3	Q9BQP9	254 aa		6.85	□□□□□ -1.31
CIT-213	ENST00000543324	CORO1B	Q9BR76	489 aa		6.85	□□□□□ -1.31
CIT-213	ENST00000543324	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	6.85	□□□□□ -1.31
CIT-213	ENST00000543324	TRIM9	Q9C026	710 aa		6.85	□□□□□ -1.31
CIT-213	ENST00000543324	CUEDC2	Q9H467	287 aa		6.85	□□□□□ -1.31
CIT-213	ENST00000543324	IL21	Q9HBE4	155 aa		6.85	□□□□□ -1.31
CIT-213	ENST00000543324	GDAP2	Q9NXN4	497 aa		6.85	□□□□□ -1.31
CIT-213	ENST00000543324	CWC15	Q9P013	229 aa	Known RBP	6.85	□□□□□ -1.31
CIT-213	ENST00000543324	SIX4	Q9UIU6	781 aa		6.85	□□□□□ -1.31
CIT-213	ENST00000543324	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	6.85	□□□□□ -1.31	8e-7	■□□□□ 10.8
CIT-213	ENST00000543324	TIMM13	Q9Y5L4	95 aa	Predicted RBP	6.85	□□□□□ -1.31
CIT-213	ENST00000543324	WNT6	Q9Y6F9	365 aa		6.85	□□□□□ -1.31
CIT-213	ENST00000543324	RP1L1	Q8IWN7	2480 aa	Predicted RBP	6.85	□□□□□ -1.31
CIT-213	ENST00000543324	UBE4B	O95155	1302 aa		6.84	□□□□□ -1.31
CIT-213	ENST00000543324	USP27X	A6NNY8	438 aa		6.84	□□□□□ -1.31
CIT-213	ENST00000543324	GABRD	O14764	452 aa		6.84	□□□□□ -1.31
CIT-213	ENST00000543324	KIAA0391	O15091	583 aa	Known RBP	6.84	□□□□□ -1.31
CIT-213	ENST00000543324	SPTLC2	O15270	562 aa		6.84	□□□□□ -1.31
CIT-213	ENST00000543324	FLRT2	O43155	660 aa		6.84	□□□□□ -1.31
CIT-213	ENST00000543324	PPFIA2	O75334	1257 aa		6.84	□□□□□ -1.31
CIT-213	ENST00000543324	EGF	P01133	1207 aa		6.84	□□□□□ -1.31
CIT-213	ENST00000543324	KRT18	P05783	430 aa	Known RBP	6.84	□□□□□ -1.31
CIT-213	ENST00000543324	CHRM1	P11229	460 aa	Predicted RBP	6.84	□□□□□ -1.31
CIT-213	ENST00000543324	SKIL	P12757	684 aa		6.84	□□□□□ -1.31
CIT-213	ENST00000543324	CPB1	P15086	417 aa		6.84	□□□□□ -1.31
CIT-213	ENST00000543324	ELF1	P32519	619 aa		6.84	□□□□□ -1.31
CIT-213	ENST00000543324	TXLNA	P40222	546 aa		6.84	□□□□□ -1.31
CIT-213	ENST00000543324	STAT6	P42226	847 aa		6.84	□□□□□ -1.31
CIT-213	ENST00000543324	MATR3	P43243	847 aa	Known RBP eCLIP	6.84	□□□□□ -1.31
CIT-213	ENST00000543324	TAF6	P49848	677 aa		6.84	□□□□□ -1.31
CIT-213	ENST00000543324	SMARCB1	Q12824	385 aa		6.84	□□□□□ -1.31
CIT-213	ENST00000543324	GRSF1	Q12849	480 aa	Known RBP eCLIP	6.84	□□□□□ -1.31
CIT-213	ENST00000543324	GRIK2	Q13002	908 aa		6.84	□□□□□ -1.31
CIT-213	ENST00000543324	DUSP4	Q13115	394 aa		6.84	□□□□□ -1.31
CIT-213	ENST00000543324	PLD1	Q13393	1074 aa		6.84	□□□□□ -1.31
CIT-213	ENST00000543324	NCAPH	Q15003	741 aa		6.84	□□□□□ -1.31
CIT-213	ENST00000543324	BMT2	Q1RMZ1	405 aa		6.84	□□□□□ -1.31
CIT-213	ENST00000543324	CCDC157	Q569K6	752 aa		6.84	□□□□□ -1.31
CIT-213	ENST00000543324	LMBRD2	Q68DH5	695 aa	Predicted RBP	6.84	□□□□□ -1.31
CIT-213	ENST00000543324	ANO7	Q6IWH7	933 aa		6.84	□□□□□ -1.31
CIT-213	ENST00000543324	PDZD4	Q76G19	769 aa	Predicted RBP	6.84	□□□□□ -1.31
CIT-213	ENST00000543324	MAMDC2	Q7Z304	686 aa	Predicted RBP	6.84	□□□□□ -1.31
CIT-213	ENST00000543324	TMEM150A	Q86TG1	271 aa		6.84	□□□□□ -1.31
CIT-213	ENST00000543324	LRRTM3	Q86VH5	581 aa		6.84	□□□□□ -1.31
CIT-213	ENST00000543324	YAF2	Q8IY57	180 aa		6.84	□□□□□ -1.31
CIT-213	ENST00000543324	LRRC52	Q8N7C0	313 aa		6.84	□□□□□ -1.31
CIT-213	ENST00000543324	FRMD1	Q8N878	549 aa		6.84	□□□□□ -1.31
CIT-213	ENST00000543324	ATAD1	Q8NBU5	361 aa		6.84	□□□□□ -1.31
CIT-213	ENST00000543324	MDGA1	Q8NFP4	955 aa		6.84	□□□□□ -1.31
CIT-213	ENST00000543324	POMGNT1	Q8WZA1	660 aa		6.84	□□□□□ -1.31
CIT-213	ENST00000543324	EXOC4	Q96A65	974 aa		6.84	□□□□□ -1.31
CIT-213	ENST00000543324	ACD	Q96AP0	544 aa		6.84	□□□□□ -1.31
CIT-213	ENST00000543324	SPACA7	Q96KW9	195 aa		6.84	□□□□□ -1.31
CIT-213	ENST00000543324	SPATA32	Q96LK8	384 aa		6.84	□□□□□ -1.31
CIT-213	ENST00000543324	ACCS	Q96QU6	501 aa		6.84	□□□□□ -1.31
CIT-213	ENST00000543324	CBWD1	Q9BRT8	395 aa		6.84	□□□□□ -1.31
CIT-213	ENST00000543324	DPH1	Q9BZG8	443 aa		6.84	□□□□□ -1.31
CIT-213	ENST00000543324	RASSF4	Q9H2L5	321 aa		6.84	□□□□□ -1.31
CIT-213	ENST00000543324	MRPL44	Q9H9J2	332 aa	Known RBP	6.84	□□□□□ -1.31
CIT-213	ENST00000543324	MAGEF1	Q9HAY2	307 aa		6.84	□□□□□ -1.31
CIT-213	ENST00000543324	ASAH2	Q9NR71	780 aa		6.84	□□□□□ -1.31
CIT-213	ENST00000543324	DPP3	Q9NY33	737 aa		6.84	□□□□□ -1.31
CIT-213	ENST00000543324	DSE	Q9UL01	958 aa		6.84	□□□□□ -1.31
CIT-213	ENST00000543324	ASB3	Q9Y575	518 aa		6.84	□□□□□ -1.31
CIT-213	ENST00000543324	LRRK1	Q38SD2	2015 aa		6.84	□□□□□ -1.31
CIT-213	ENST00000543324		A0A1W2PQD8	194 aa		6.83	□□□□□ -1.32
CIT-213	ENST00000543324	GOLGA6L4	A6NEF3	574 aa		6.83	□□□□□ -1.32
CIT-213	ENST00000543324	ERICH4	A6NGS2	130 aa		6.83	□□□□□ -1.32
CIT-213	ENST00000543324	VGLL3	A8MV65	326 aa		6.83	□□□□□ -1.32
CIT-213	ENST00000543324	EFCAB8	A8MWE9	144 aa		6.83	□□□□□ -1.32
CIT-213	ENST00000543324	KPNA7	A9QM74	516 aa		6.83	□□□□□ -1.32
CIT-213	ENST00000543324	TGFB1I1	O43294	461 aa		6.83	□□□□□ -1.32
CIT-213	ENST00000543324	NRDC	O43847	1150 aa		6.83	□□□□□ -1.32
CIT-213	ENST00000543324	CUTA	O60888	179 aa		6.83	□□□□□ -1.32
CIT-213	ENST00000543324	TADA3	O75528	432 aa		6.83	□□□□□ -1.32
CIT-213	ENST00000543324	GCNT3	O95395	438 aa		6.83	□□□□□ -1.32
CIT-213	ENST00000543324	LDHA	P00338	332 aa	Known RBP	6.83	□□□□□ -1.32
CIT-213	ENST00000543324	FAM87A	P0C7U9	286 aa		6.83	□□□□□ -1.32
CIT-213	ENST00000543324	HMGA1	P17096	107 aa	Known RBP	6.83	□□□□□ -1.32
CIT-213	ENST00000543324	PNPLA4	P41247	253 aa		6.83	□□□□□ -1.32
CIT-213	ENST00000543324	NOP2	P46087	812 aa	Known RBP	6.83	□□□□□ -1.32
CIT-213	ENST00000543324	ARPP19	P56211	112 aa		6.83	□□□□□ -1.32

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