RNA–Protein interactions for RNA: ENST00000543004.5

OTUB1-211, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,647 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-211ENST00000543004 DAB1O75553 588 aa21.75■■□□□ 1.07
OTUB1-211ENST00000543004 CYP1A2P05177 515 aa21.75■■□□□ 1.07
OTUB1-211ENST00000543004 GLI1P08151 1106 aa21.75■■□□□ 1.07
OTUB1-211ENST00000543004 MYBL1P10243 752 aa21.75■■□□□ 1.07
OTUB1-211ENST00000543004 RALAP11233 206 aa21.75■■□□□ 1.07
OTUB1-211ENST00000543004 SCNN1AP37088 669 aa21.75■■□□□ 1.07
OTUB1-211ENST00000543004 EFEMP1Q12805 493 aa21.75■■□□□ 1.07
OTUB1-211ENST00000543004 SMAD2Q15796 467 aaKnown RBP21.75■■□□□ 1.07
OTUB1-211ENST00000543004 RSRC2Q7L4I2 434 aaKnown RBP21.75■■□□□ 1.07
OTUB1-211ENST00000543004 MIB1Q86YT6 1006 aa21.75■■□□□ 1.07
OTUB1-211ENST00000543004 CTNNBL1Q8WYA6 563 aaPredicted RBP21.75■■□□□ 1.07
OTUB1-211ENST00000543004 TRIM11Q96F44 468 aa21.75■■□□□ 1.07
OTUB1-211ENST00000543004 PARVAQ9NVD7 372 aa21.75■■□□□ 1.07
OTUB1-211ENST00000543004 SMPD4Q9NXE4 827 aa21.75■■□□□ 1.07
OTUB1-211ENST00000543004 CALCOCO1Q9P1Z2 691 aa21.75■■□□□ 1.07
OTUB1-211ENST00000543004 THEGQ9P2T0 379 aa21.75■■□□□ 1.07
OTUB1-211ENST00000543004 CDH7Q9ULB5 785 aa21.75■■□□□ 1.07
OTUB1-211ENST00000543004 CCL26Q9Y258 94 aa21.75■■□□□ 1.07
OTUB1-211ENST00000543004 PRAMEF12O95522 483 aa21.74■■□□□ 1.07
OTUB1-211ENST00000543004 OLFM2O95897 454 aa21.74■■□□□ 1.07
OTUB1-211ENST00000543004 CKMP06732 381 aa21.74■■□□□ 1.07
OTUB1-211ENST00000543004 TMEM253P0C7T8 217 aa21.74■■□□□ 1.07
OTUB1-211ENST00000543004 OGDHQ02218 1023 aa21.74■■□□□ 1.07
OTUB1-211ENST00000543004 CMTM8Q8IZV2 173 aa21.74■■□□□ 1.07
OTUB1-211ENST00000543004 ZSCAN18Q8TBC5 510 aaPredicted RBP21.74■■□□□ 1.07
OTUB1-211ENST00000543004 DQX1Q8TE96 717 aaKnown RBP21.74■■□□□ 1.07
OTUB1-211ENST00000543004 RNF139Q8WU17 664 aa21.74■■□□□ 1.07
OTUB1-211ENST00000543004 CFAP57Q96MR6 1250 aa21.74■■□□□ 1.07
OTUB1-211ENST00000543004 RASAL2Q9UJF2 1139 aa21.74■■□□□ 1.07
OTUB1-211ENST00000543004 VCANP13611 3396 aa21.74■■□□□ 1.07
OTUB1-211ENST00000543004 TCF20Q9UGU0 1960 aaKnown RBP21.73■■□□□ 1.07
OTUB1-211ENST00000543004 TRAV19A0A0A6YYK7 116 aa21.73■■□□□ 1.07
OTUB1-211ENST00000543004 MSI1O43347 362 aaKnown RBP21.73■■□□□ 1.07
OTUB1-211ENST00000543004 ATP5C1P36542 298 aaKnown RBP21.73■■□□□ 1.07
OTUB1-211ENST00000543004 TUBP50607 506 aa21.73■■□□□ 1.07
OTUB1-211ENST00000543004 RAB6CQ53S08 254 aa21.73■■□□□ 1.07
OTUB1-211ENST00000543004 FAM78AQ5JUQ0 283 aa21.73■■□□□ 1.07
OTUB1-211ENST00000543004 C10orf76Q5T2E6 689 aa21.73■■□□□ 1.07
OTUB1-211ENST00000543004 OTUD1Q5VV17 481 aaPredicted RBP21.73■■□□□ 1.07
OTUB1-211ENST00000543004 TTC16Q8NEE8 873 aa21.73■■□□□ 1.07
OTUB1-211ENST00000543004 RXFP2Q8WXD0 754 aa21.73■■□□□ 1.07
OTUB1-211ENST00000543004 BTBD6Q96KE9 485 aa21.73■■□□□ 1.07
OTUB1-211ENST00000543004 NUP85Q9BW27 656 aa21.73■■□□□ 1.07
OTUB1-211ENST00000543004 LACRTQ9GZZ8 138 aa21.73■■□□□ 1.07
OTUB1-211ENST00000543004 NACA2Q9H009 215 aa21.73■■□□□ 1.07
OTUB1-211ENST00000543004 RAB6CQ9H0N0 254 aa21.73■■□□□ 1.07
OTUB1-211ENST00000543004 OSGEPQ9NPF4 335 aa21.73■■□□□ 1.07
OTUB1-211ENST00000543004 GKN1Q9NS71 199 aa21.73■■□□□ 1.07
OTUB1-211ENST00000543004 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.73■■□□□ 1.07
OTUB1-211ENST00000543004 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.73■■□□□ 1.07
OTUB1-211ENST00000543004 ADGRG1Q9Y653 693 aa21.73■■□□□ 1.07
OTUB1-211ENST00000543004 C2CD4BA6NLJ0 364 aa21.73■■□□□ 1.07
OTUB1-211ENST00000543004 MBL2P11226 248 aaPredicted RBP21.73■■□□□ 1.07
OTUB1-211ENST00000543004 LAMP2P13473 410 aa21.73■■□□□ 1.07
OTUB1-211ENST00000543004 DDX6P26196 483 aaKnown RBP eCLIP21.73■■□□□ 1.071e-7■■□□□ 14.2
OTUB1-211ENST00000543004 MATKP42679 507 aa21.73■■□□□ 1.07
OTUB1-211ENST00000543004 SH3PXD2AQ5TCZ1 1133 aa21.73■■□□□ 1.07
OTUB1-211ENST00000543004 DCUN1D2Q6PH85 259 aa21.73■■□□□ 1.07
OTUB1-211ENST00000543004 TAC4Q86UU9 113 aa21.73■■□□□ 1.07
OTUB1-211ENST00000543004 ARID3BQ8IVW6 561 aaPredicted RBP21.73■■□□□ 1.07
OTUB1-211ENST00000543004 RIN3Q8TB24 985 aa21.73■■□□□ 1.07
OTUB1-211ENST00000543004 WBP2Q969T9 261 aa21.73■■□□□ 1.07
OTUB1-211ENST00000543004 RPGRIP1Q96KN7 1286 aa21.73■■□□□ 1.07
OTUB1-211ENST00000543004 ZFRQ96KR1 1074 aaKnown RBP21.73■■□□□ 1.07
OTUB1-211ENST00000543004 DUSP10Q9Y6W6 482 aa21.73■■□□□ 1.07
OTUB1-211ENST00000543004 SYNJ2BP-COX16A0A087WUM0 186 aa21.72■■□□□ 1.07
OTUB1-211ENST00000543004 TMEM191CA6NGB0 347 aa21.72■■□□□ 1.07
OTUB1-211ENST00000543004 C2CD4DB7Z1M9 353 aa21.72■■□□□ 1.07
OTUB1-211ENST00000543004 IPO7O95373 1038 aaKnown RBP21.72■■□□□ 1.07
OTUB1-211ENST00000543004 PDGFRAP16234 1089 aa21.72■■□□□ 1.07
OTUB1-211ENST00000543004 NOS2P35228 1153 aa21.72■■□□□ 1.07
OTUB1-211ENST00000543004 AVPR1AP37288 418 aa21.72■■□□□ 1.07
OTUB1-211ENST00000543004 VIPR2P41587 438 aa21.72■■□□□ 1.07
OTUB1-211ENST00000543004 ZNF252P-AS1Q0IIN9 211 aa21.72■■□□□ 1.07
OTUB1-211ENST00000543004 C15orf59Q2T9L4 293 aaPredicted RBP21.72■■□□□ 1.07
OTUB1-211ENST00000543004 CCDC14Q49A88 953 aa21.72■■□□□ 1.07
OTUB1-211ENST00000543004 BEND5Q7L4P6 421 aa21.72■■□□□ 1.07
OTUB1-211ENST00000543004 ZNF276Q8N554 614 aa21.72■■□□□ 1.07
OTUB1-211ENST00000543004 USP13Q92995 863 aaPredicted RBP21.72■■□□□ 1.07
OTUB1-211ENST00000543004 RSPRY1Q96DX4 576 aa21.72■■□□□ 1.07
OTUB1-211ENST00000543004 ASB16Q96NS5 453 aa21.72■■□□□ 1.07
OTUB1-211ENST00000543004 TBCBQ99426 244 aa21.72■■□□□ 1.07
OTUB1-211ENST00000543004 DDX23Q9BUQ8 820 aaKnown RBP21.72■■□□□ 1.07
OTUB1-211ENST00000543004 PHF7Q9BWX1 381 aaPredicted RBP21.72■■□□□ 1.07
OTUB1-211ENST00000543004 GDE1Q9NZC3 331 aa21.72■■□□□ 1.07
OTUB1-211ENST00000543004 MARCH2Q9P0N8 246 aa21.72■■□□□ 1.07
OTUB1-211ENST00000543004 COX16Q9P0S2 106 aa21.72■■□□□ 1.07
OTUB1-211ENST00000543004 CTTNBP2NLQ9P2B4 639 aa21.72■■□□□ 1.07
OTUB1-211ENST00000543004 TRIM10Q9UDY6 481 aa21.72■■□□□ 1.07
OTUB1-211ENST00000543004 DNMT3LQ9UJW3 386 aa21.72■■□□□ 1.07
OTUB1-211ENST00000543004 CPQQ9Y646 472 aa21.72■■□□□ 1.07
OTUB1-211ENST00000543004 SCAMP3O14828 347 aaKnown RBP21.71■■□□□ 1.07
OTUB1-211ENST00000543004 HMBSP08397 361 aa21.71■■□□□ 1.07
OTUB1-211ENST00000543004 ATXN1P54253 815 aaKnown RBP21.71■■□□□ 1.07
OTUB1-211ENST00000543004 ATP11AP98196 1134 aa21.71■■□□□ 1.07
OTUB1-211ENST00000543004 MSANTD2Q6P1R3 559 aa21.71■■□□□ 1.07
OTUB1-211ENST00000543004 SLC35G2Q8TBE7 412 aa21.71■■□□□ 1.07
OTUB1-211ENST00000543004 LRRC3BQ96PB8 259 aa21.71■■□□□ 1.07
OTUB1-211ENST00000543004 NPY6RQ99463 290 aa21.71■■□□□ 1.07
OTUB1-211ENST00000543004 SMOC2Q9H3U7 446 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms