RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 KHSRPQ92945 711 aaKnown RBP eCLIP17.9■□□□□ 0.46
RABGGTA-203ENST00000543002 C11orf70Q9BRQ4 267 aa17.9■□□□□ 0.46
RABGGTA-203ENST00000543002 POPDC2Q9HBU9 364 aa17.9■□□□□ 0.46
RABGGTA-203ENST00000543002 SLC2A4RGQ9NR83 387 aa17.9■□□□□ 0.46
RABGGTA-203ENST00000543002 GKN1Q9NS71 199 aa17.9■□□□□ 0.46
RABGGTA-203ENST00000543002 ZNHIT6Q9NWK9 470 aaKnown RBP17.9■□□□□ 0.46
RABGGTA-203ENST00000543002 MARCH2Q9P0N8 246 aa17.9■□□□□ 0.46
RABGGTA-203ENST00000543002 ARHGAP20Q9P2F6 1191 aa17.9■□□□□ 0.46
RABGGTA-203ENST00000543002 RASAL2Q9UJF2 1139 aa17.9■□□□□ 0.46
RABGGTA-203ENST00000543002 STRIP2Q9ULQ0 834 aa17.9■□□□□ 0.46
RABGGTA-203ENST00000543002 BDP1A6H8Y1 2624 aa17.9■□□□□ 0.46
RABGGTA-203ENST00000543002 HELZP42694 1942 aaKnown RBP17.89■□□□□ 0.45
RABGGTA-203ENST00000543002 CHADO15335 359 aa17.89■□□□□ 0.45
RABGGTA-203ENST00000543002 DCXO43602 365 aa17.89■□□□□ 0.45
RABGGTA-203ENST00000543002 HSF2BPO75031 334 aa17.89■□□□□ 0.45
RABGGTA-203ENST00000543002 PLEKP08567 350 aaPredicted RBP17.89■□□□□ 0.45
RABGGTA-203ENST00000543002 GZMAP12544 262 aa17.89■□□□□ 0.45
RABGGTA-203ENST00000543002 NCAM1P13591 858 aa17.89■□□□□ 0.45
RABGGTA-203ENST00000543002 CDC25BP30305 580 aa17.89■□□□□ 0.45
RABGGTA-203ENST00000543002 GDI1P31150 447 aa17.89■□□□□ 0.45
RABGGTA-203ENST00000543002 GPC5P78333 572 aa17.89■□□□□ 0.45
RABGGTA-203ENST00000543002 COG7P83436 770 aa17.89■□□□□ 0.45
RABGGTA-203ENST00000543002 C1QBPQ07021 282 aaKnown RBP17.89■□□□□ 0.45
RABGGTA-203ENST00000543002 ARHGAP29Q52LW3 1261 aa17.89■□□□□ 0.45
RABGGTA-203ENST00000543002 MON1BQ7L1V2 547 aa17.89■□□□□ 0.45
RABGGTA-203ENST00000543002 VPS36Q86VN1 386 aa17.89■□□□□ 0.45
RABGGTA-203ENST00000543002 MIB1Q86YT6 1006 aa17.89■□□□□ 0.45
RABGGTA-203ENST00000543002 SLC2A13Q96QE2 648 aa17.89■□□□□ 0.45
RABGGTA-203ENST00000543002 SMOC2Q9H3U7 446 aa17.89■□□□□ 0.45
RABGGTA-203ENST00000543002 BRD9Q9H8M2 597 aa17.89■□□□□ 0.45
RABGGTA-203ENST00000543002 TAS2R14Q9NYV8 317 aa17.89■□□□□ 0.45
RABGGTA-203ENST00000543002 ADAM22Q9P0K1 906 aa17.89■□□□□ 0.45
RABGGTA-203ENST00000543002 CFAP97Q9P2B7 532 aa17.89■□□□□ 0.45
RABGGTA-203ENST00000543002 WDR35Q9P2L0 1181 aa17.89■□□□□ 0.45
RABGGTA-203ENST00000543002 NAALADL1Q9UQQ1 740 aa17.89■□□□□ 0.45
RABGGTA-203ENST00000543002 E2F8A0AVK6 867 aa17.88■□□□□ 0.45
RABGGTA-203ENST00000543002 TNFRSF10AO00220 468 aa17.88■□□□□ 0.45
RABGGTA-203ENST00000543002 CAPN9O14815 690 aa17.88■□□□□ 0.45
RABGGTA-203ENST00000543002 ZNF263O14978 683 aa17.88■□□□□ 0.45
RABGGTA-203ENST00000543002 CALB1P05937 261 aa17.88■□□□□ 0.45
RABGGTA-203ENST00000543002 GSCP56915 257 aaPredicted RBP17.88■□□□□ 0.45
RABGGTA-203ENST00000543002 ZXDAP98168 799 aa17.88■□□□□ 0.45
RABGGTA-203ENST00000543002 FAM102AQ5T9C2 384 aaPredicted RBP17.88■□□□□ 0.45
RABGGTA-203ENST00000543002 SYPL2Q5VXT5 272 aa17.88■□□□□ 0.45
RABGGTA-203ENST00000543002 CC2D1AQ6P1N0 951 aaPredicted RBP17.88■□□□□ 0.45
RABGGTA-203ENST00000543002 TTC16Q8NEE8 873 aa17.88■□□□□ 0.45
RABGGTA-203ENST00000543002 IRF7Q92985 503 aa17.88■□□□□ 0.45
RABGGTA-203ENST00000543002 VCPIP1Q96JH7 1222 aa17.88■□□□□ 0.45
RABGGTA-203ENST00000543002 ADAMTS1Q9UHI8 967 aa17.88■□□□□ 0.45
RABGGTA-203ENST00000543002 SFMBT1Q9UHJ3 866 aa17.88■□□□□ 0.45
RABGGTA-203ENST00000543002 VCANP13611 3396 aa17.88■□□□□ 0.45
RABGGTA-203ENST00000543002 SLC12A8A0AV02 714 aa17.87■□□□□ 0.45
RABGGTA-203ENST00000543002 GOLGA8SH3BPF8 625 aa17.87■□□□□ 0.45
RABGGTA-203ENST00000543002 DAB1O75553 588 aa17.87■□□□□ 0.45
RABGGTA-203ENST00000543002 GRAP2O75791 330 aa17.87■□□□□ 0.45
RABGGTA-203ENST00000543002 IRF1P10914 325 aa17.87■□□□□ 0.45
RABGGTA-203ENST00000543002 ALADP13716 330 aa17.87■□□□□ 0.45
RABGGTA-203ENST00000543002 EIF4A3P38919 411 aaKnown RBP17.87■□□□□ 0.45
RABGGTA-203ENST00000543002 PFKPQ01813 784 aa17.87■□□□□ 0.45
RABGGTA-203ENST00000543002 MCOLN2Q8IZK6 566 aa17.87■□□□□ 0.45
RABGGTA-203ENST00000543002 DEFB106AQ8N104 65 aa17.87■□□□□ 0.45
RABGGTA-203ENST00000543002 TC2NQ8N9U0 490 aa17.87■□□□□ 0.45
RABGGTA-203ENST00000543002 DQX1Q8TE96 717 aaKnown RBP17.87■□□□□ 0.45
RABGGTA-203ENST00000543002 WBP2Q969T9 261 aa17.87■□□□□ 0.45
RABGGTA-203ENST00000543002 ZFYVE19Q96K21 471 aa17.87■□□□□ 0.45
RABGGTA-203ENST00000543002 FAM83CQ9BQN1 747 aa17.87■□□□□ 0.45
RABGGTA-203ENST00000543002 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.87■□□□□ 0.45
RABGGTA-203ENST00000543002 TRPV5Q9NQA5 729 aa17.87■□□□□ 0.45
RABGGTA-203ENST00000543002 SH3BP1Q9Y3L3 701 aa17.87■□□□□ 0.45
RABGGTA-203ENST00000543002 HBS1LQ9Y450 684 aaKnown RBP17.87■□□□□ 0.45
RABGGTA-203ENST00000543002 SSU72P8A0A1W2PR75 194 aa17.86■□□□□ 0.45
RABGGTA-203ENST00000543002 TMCO5BA8MYB1 307 aa17.86■□□□□ 0.45
RABGGTA-203ENST00000543002 ARNTLO00327 626 aa17.86■□□□□ 0.45
RABGGTA-203ENST00000543002 GREM1O60565 184 aa17.86■□□□□ 0.45
RABGGTA-203ENST00000543002 RTN2O75298 545 aa17.86■□□□□ 0.45
RABGGTA-203ENST00000543002 STC2O76061 302 aa17.86■□□□□ 0.45
RABGGTA-203ENST00000543002 NOS2P35228 1153 aa17.86■□□□□ 0.45
RABGGTA-203ENST00000543002 KPNA1P52294 538 aaPredicted RBP17.86■□□□□ 0.45
RABGGTA-203ENST00000543002 CDK17Q00537 523 aa17.86■□□□□ 0.45
RABGGTA-203ENST00000543002 MAPK8IP2Q13387 824 aaPredicted RBP17.86■□□□□ 0.45
RABGGTA-203ENST00000543002 PDGFRLQ15198 375 aa17.86■□□□□ 0.45
RABGGTA-203ENST00000543002 DCAF6Q58WW2 860 aa17.86■□□□□ 0.45
RABGGTA-203ENST00000543002 HTR3DQ70Z44 454 aa17.86■□□□□ 0.45
RABGGTA-203ENST00000543002 ARCQ7LC44 396 aa17.86■□□□□ 0.45
RABGGTA-203ENST00000543002 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.86■□□□□ 0.45
RABGGTA-203ENST00000543002 OSCP1Q8WVF1 389 aa17.86■□□□□ 0.45
RABGGTA-203ENST00000543002 EDAQ92838 391 aa17.86■□□□□ 0.45
RABGGTA-203ENST00000543002 DNASE1L2Q92874 299 aa17.86■□□□□ 0.45
RABGGTA-203ENST00000543002 ASIC4Q96FT7 647 aa17.86■□□□□ 0.45
RABGGTA-203ENST00000543002 ISCUQ9H1K1 167 aa17.86■□□□□ 0.45
RABGGTA-203ENST00000543002 DUS2Q9NX74 493 aaKnown RBP17.86■□□□□ 0.45
RABGGTA-203ENST00000543002 TMEM59LQ9UK28 342 aa17.86■□□□□ 0.45
RABGGTA-203ENST00000543002 LSM7Q9UK45 103 aaKnown RBP17.86■□□□□ 0.45
RABGGTA-203ENST00000543002 KIF26AQ9ULI4 1882 aaPredicted RBP17.86■□□□□ 0.45
RABGGTA-203ENST00000543002 A0A087X0T9 212 aa17.85■□□□□ 0.45
RABGGTA-203ENST00000543002 GOLGA6L3A6NEY3 463 aa17.85■□□□□ 0.45
RABGGTA-203ENST00000543002 PI4K2BG5E9Z4 385 aa17.85■□□□□ 0.45
RABGGTA-203ENST00000543002 SLC9A3R1O14745 358 aaPredicted RBP17.85■□□□□ 0.45
RABGGTA-203ENST00000543002 FTLP02792 175 aaPredicted RBP17.85■□□□□ 0.45
RABGGTA-203ENST00000543002 HMBSP08397 361 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms