RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, human

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB3-210	ENST00000542817	ARL14EP	Q8N8R7	260 aa	Predicted RBP	11.17	□□□□□ -0.62
NPIPB3-210	ENST00000542817	CCDC112	Q8NEF3	446 aa		11.17	□□□□□ -0.62
NPIPB3-210	ENST00000542817	DQX1	Q8TE96	717 aa	Known RBP	11.17	□□□□□ -0.62
NPIPB3-210	ENST00000542817	IPO4	Q8TEX9	1081 aa	Known RBP	11.17	□□□□□ -0.62
NPIPB3-210	ENST00000542817	ZNF653	Q96CK0	615 aa		11.17	□□□□□ -0.62
NPIPB3-210	ENST00000542817	NPY6R	Q99463	290 aa		11.17	□□□□□ -0.62
NPIPB3-210	ENST00000542817	DDX23	Q9BUQ8	820 aa	Known RBP	11.17	□□□□□ -0.62
NPIPB3-210	ENST00000542817	POPDC2	Q9HBU9	364 aa		11.17	□□□□□ -0.62
NPIPB3-210	ENST00000542817	OSGEP	Q9NPF4	335 aa		11.17	□□□□□ -0.62
NPIPB3-210	ENST00000542817	ANLN	Q9NQW6	1124 aa		11.17	□□□□□ -0.62
NPIPB3-210	ENST00000542817	TLR8	Q9NR97	1041 aa	Known RBP	11.17	□□□□□ -0.62
NPIPB3-210	ENST00000542817	METTL5	Q9NRN9	209 aa	Known RBP	11.17	□□□□□ -0.62
NPIPB3-210	ENST00000542817	EHD2	Q9NZN4	543 aa		11.17	□□□□□ -0.62
NPIPB3-210	ENST00000542817	WDR35	Q9P2L0	1181 aa		11.17	□□□□□ -0.62
NPIPB3-210	ENST00000542817	CNOT8	Q9UFF9	292 aa	Known RBP	11.17	□□□□□ -0.62
NPIPB3-210	ENST00000542817	INTU	Q9ULD6	942 aa		11.17	□□□□□ -0.62
NPIPB3-210	ENST00000542817	CCL26	Q9Y258	94 aa		11.17	□□□□□ -0.62
NPIPB3-210	ENST00000542817	DUSP10	Q9Y6W6	482 aa		11.17	□□□□□ -0.62
NPIPB3-210	ENST00000542817	SOBP	A7XYQ1	873 aa		11.16	□□□□□ -0.62
NPIPB3-210	ENST00000542817	GOLGA6L6	A8MZA4	724 aa		11.16	□□□□□ -0.62
NPIPB3-210	ENST00000542817	ZNF197	O14709	1029 aa		11.16	□□□□□ -0.62
NPIPB3-210	ENST00000542817	HSF2BP	O75031	334 aa		11.16	□□□□□ -0.62
NPIPB3-210	ENST00000542817	DAB1	O75553	588 aa		11.16	□□□□□ -0.62
NPIPB3-210	ENST00000542817	MTA2	O94776	668 aa		11.16	□□□□□ -0.62
NPIPB3-210	ENST00000542817	ENDOD1	O94919	500 aa		11.16	□□□□□ -0.62
NPIPB3-210	ENST00000542817	FGF19	O95750	216 aa		11.16	□□□□□ -0.62
NPIPB3-210	ENST00000542817	MYBL1	P10243	752 aa		11.16	□□□□□ -0.62
NPIPB3-210	ENST00000542817	KRT3	P12035	628 aa		11.16	□□□□□ -0.62
NPIPB3-210	ENST00000542817	IL9	P15248	144 aa		11.16	□□□□□ -0.62
NPIPB3-210	ENST00000542817	MSN	P26038	577 aa	Known RBP	11.16	□□□□□ -0.62
NPIPB3-210	ENST00000542817	CYLC1	P35663	651 aa	Predicted RBP	11.16	□□□□□ -0.62
NPIPB3-210	ENST00000542817	MATK	P42679	507 aa		11.16	□□□□□ -0.62
NPIPB3-210	ENST00000542817	MAGEA1	P43355	309 aa		11.16	□□□□□ -0.62
NPIPB3-210	ENST00000542817	PSEN1	P49768	467 aa		11.16	□□□□□ -0.62
NPIPB3-210	ENST00000542817	ATXN1	P54253	815 aa	Known RBP	11.16	□□□□□ -0.62
NPIPB3-210	ENST00000542817	GPC5	P78333	572 aa		11.16	□□□□□ -0.62
NPIPB3-210	ENST00000542817	SLC7A9	P82251	487 aa		11.16	□□□□□ -0.62
NPIPB3-210	ENST00000542817	TAF12	Q16514	161 aa		11.16	□□□□□ -0.62
NPIPB3-210	ENST00000542817	C10orf76	Q5T2E6	689 aa		11.16	□□□□□ -0.62
NPIPB3-210	ENST00000542817	HECTD3	Q5T447	861 aa		11.16	□□□□□ -0.62
NPIPB3-210	ENST00000542817	GPR158	Q5T848	1215 aa		11.16	□□□□□ -0.62
NPIPB3-210	ENST00000542817	GET4	Q7L5D6	327 aa	Predicted RBP	11.16	□□□□□ -0.62
NPIPB3-210	ENST00000542817	TAC4	Q86UU9	113 aa		11.16	□□□□□ -0.62
NPIPB3-210	ENST00000542817	MAB21L3	Q8N8X9	362 aa		11.16	□□□□□ -0.62
NPIPB3-210	ENST00000542817	ST13P5	Q8NFI4	369 aa	Predicted RBP	11.16	□□□□□ -0.62
NPIPB3-210	ENST00000542817	ADAM32	Q8TC27	787 aa		11.16	□□□□□ -0.62
NPIPB3-210	ENST00000542817	CENPI	Q92674	756 aa	Predicted RBP	11.16	□□□□□ -0.62
NPIPB3-210	ENST00000542817	RIPOR3	Q96MK2	946 aa		11.16	□□□□□ -0.62
NPIPB3-210	ENST00000542817	NECTIN4	Q96NY8	510 aa		11.16	□□□□□ -0.62
NPIPB3-210	ENST00000542817	KLF16	Q9BXK1	252 aa	Predicted RBP	11.16	□□□□□ -0.62
NPIPB3-210	ENST00000542817	SMG9	Q9H0W8	520 aa	Known RBP	11.16	□□□□□ -0.62
NPIPB3-210	ENST00000542817	TASP1	Q9H6P5	420 aa		11.16	□□□□□ -0.62
NPIPB3-210	ENST00000542817	SYNC	Q9H7C4	482 aa		11.16	□□□□□ -0.62
NPIPB3-210	ENST00000542817	ABCC13	Q9NSE7	274 aa		11.16	□□□□□ -0.62
NPIPB3-210	ENST00000542817	TRIM10	Q9UDY6	481 aa		11.16	□□□□□ -0.62
NPIPB3-210	ENST00000542817	SFMBT1	Q9UHJ3	866 aa		11.16	□□□□□ -0.62
NPIPB3-210	ENST00000542817	STRIP2	Q9ULQ0	834 aa		11.16	□□□□□ -0.62
NPIPB3-210	ENST00000542817	PYCARD	Q9ULZ3	195 aa		11.16	□□□□□ -0.62
NPIPB3-210	ENST00000542817	SPDYE4	A6NLX3	237 aa		11.15	□□□□□ -0.62
NPIPB3-210	ENST00000542817	DPYSL4	O14531	572 aa		11.15	□□□□□ -0.62
NPIPB3-210	ENST00000542817	DYNC1I1	O14576	645 aa		11.15	□□□□□ -0.62
NPIPB3-210	ENST00000542817	SART1	O43290	800 aa	Known RBP	11.15	□□□□□ -0.62
NPIPB3-210	ENST00000542817	IGLV3-27	P01718	113 aa		11.15	□□□□□ -0.62
NPIPB3-210	ENST00000542817	LAMP2	P13473	410 aa		11.15	□□□□□ -0.62
NPIPB3-210	ENST00000542817	DDX6	P26196	483 aa	Known RBP eCLIP	11.15	□□□□□ -0.62
NPIPB3-210	ENST00000542817	KCNQ1	P51787	676 aa		11.15	□□□□□ -0.62
NPIPB3-210	ENST00000542817	RNASE9	P60153	205 aa	Known RBP	11.15	□□□□□ -0.62
NPIPB3-210	ENST00000542817	C15orf59	Q2T9L4	293 aa	Predicted RBP	11.15	□□□□□ -0.62
NPIPB3-210	ENST00000542817	FAM78A	Q5JUQ0	283 aa		11.15	□□□□□ -0.62
NPIPB3-210	ENST00000542817	BTBD8	Q5XKL5	378 aa		11.15	□□□□□ -0.62
NPIPB3-210	ENST00000542817	DNAJC24	Q6P3W2	148 aa		11.15	□□□□□ -0.62
NPIPB3-210	ENST00000542817	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	11.15	□□□□□ -0.62
NPIPB3-210	ENST00000542817	CMTM8	Q8IZV2	173 aa		11.15	□□□□□ -0.62
NPIPB3-210	ENST00000542817	ARHGAP18	Q8N392	663 aa		11.15	□□□□□ -0.62
NPIPB3-210	ENST00000542817	MSANTD4	Q8NCY6	345 aa		11.15	□□□□□ -0.62
NPIPB3-210	ENST00000542817	SLC35G2	Q8TBE7	412 aa		11.15	□□□□□ -0.62
NPIPB3-210	ENST00000542817	RXFP2	Q8WXD0	754 aa		11.15	□□□□□ -0.62
NPIPB3-210	ENST00000542817	MRPS31	Q92665	395 aa	Known RBP	11.15	□□□□□ -0.62
NPIPB3-210	ENST00000542817	USP13	Q92995	863 aa	Predicted RBP	11.15	□□□□□ -0.62
NPIPB3-210	ENST00000542817	FAM149B1	Q96BN6	582 aa		11.15	□□□□□ -0.62
NPIPB3-210	ENST00000542817	TRIM11	Q96F44	468 aa		11.15	□□□□□ -0.62
NPIPB3-210	ENST00000542817	P2RY11	Q96G91	374 aa		11.15	□□□□□ -0.62
NPIPB3-210	ENST00000542817	SLC39A13	Q96H72	371 aa		11.15	□□□□□ -0.62
NPIPB3-210	ENST00000542817	BTBD6	Q96KE9	485 aa		11.15	□□□□□ -0.62
NPIPB3-210	ENST00000542817	CFAP57	Q96MR6	1250 aa		11.15	□□□□□ -0.62
NPIPB3-210	ENST00000542817	ASB16	Q96NS5	453 aa		11.15	□□□□□ -0.62
NPIPB3-210	ENST00000542817	MCEE	Q96PE7	176 aa		11.15	□□□□□ -0.62
NPIPB3-210	ENST00000542817	NUP85	Q9BW27	656 aa		11.15	□□□□□ -0.62
NPIPB3-210	ENST00000542817	SMOC2	Q9H3U7	446 aa		11.15	□□□□□ -0.62
NPIPB3-210	ENST00000542817	TRPV4	Q9HBA0	871 aa		11.15	□□□□□ -0.62
NPIPB3-210	ENST00000542817	GKN1	Q9NS71	199 aa		11.15	□□□□□ -0.62
NPIPB3-210	ENST00000542817	PARVA	Q9NVD7	372 aa		11.15	□□□□□ -0.62
NPIPB3-210	ENST00000542817	GDE1	Q9NZC3	331 aa		11.15	□□□□□ -0.62
NPIPB3-210	ENST00000542817	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	11.15	□□□□□ -0.62
NPIPB3-210	ENST00000542817	EPS15L1	Q9UBC2	864 aa		11.15	□□□□□ -0.62
NPIPB3-210	ENST00000542817	MYO1A	Q9UBC5	1043 aa		11.15	□□□□□ -0.62
NPIPB3-210	ENST00000542817	CDH7	Q9ULB5	785 aa		11.15	□□□□□ -0.62
NPIPB3-210	ENST00000542817	BTNL10	A8MVZ5	291 aa		11.14	□□□□□ -0.63
NPIPB3-210	ENST00000542817	C2CD4D	B7Z1M9	353 aa		11.14	□□□□□ -0.63
NPIPB3-210	ENST00000542817	MSI1	O43347	362 aa	Known RBP	11.14	□□□□□ -0.63

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