RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 FAM30AQ9NZY2 134 aa9.44□□□□□ -0.9
MRPS35-204ENST00000542199 MGAMO43451 1857 aa9.43□□□□□ -0.9
MRPS35-204ENST00000542199 KRTAP9-6A0A140TA67 174 aa9.43□□□□□ -0.9
MRPS35-204ENST00000542199 K7ESM1 405 aa9.43□□□□□ -0.9
MRPS35-204ENST00000542199 PRKAB2O43741 272 aa9.43□□□□□ -0.9
MRPS35-204ENST00000542199 PQBP1O60828 265 aaKnown RBP9.43□□□□□ -0.9
MRPS35-204ENST00000542199 CNMDO75829 334 aa9.43□□□□□ -0.9
MRPS35-204ENST00000542199 AGFG2O95081 481 aa9.43□□□□□ -0.9
MRPS35-204ENST00000542199 MBD4O95243 580 aa9.43□□□□□ -0.9
MRPS35-204ENST00000542199 MYL3P08590 195 aa9.43□□□□□ -0.9
MRPS35-204ENST00000542199 CYP2D6P10635 497 aa9.43□□□□□ -0.9
MRPS35-204ENST00000542199 MAPK4P31152 587 aa9.43□□□□□ -0.9
MRPS35-204ENST00000542199 APOBEC3AP31941 199 aaPredicted RBP9.43□□□□□ -0.9
MRPS35-204ENST00000542199 NEK3P51956 506 aa9.43□□□□□ -0.9
MRPS35-204ENST00000542199 NOMO3P69849 1222 aa9.43□□□□□ -0.9
MRPS35-204ENST00000542199 PLP2Q04941 152 aa9.43□□□□□ -0.9
MRPS35-204ENST00000542199 FBLN7Q53RD9 439 aa9.43□□□□□ -0.9
MRPS35-204ENST00000542199 METRNLQ641Q3 311 aa9.43□□□□□ -0.9
MRPS35-204ENST00000542199 CATSPERGQ6ZRH7 1159 aa9.43□□□□□ -0.9
MRPS35-204ENST00000542199 HTR3DQ70Z44 454 aa9.43□□□□□ -0.9
MRPS35-204ENST00000542199 TMIEQ8NEW7 156 aa9.43□□□□□ -0.9
MRPS35-204ENST00000542199 NLGN4YQ8NFZ3 816 aaPredicted RBP9.43□□□□□ -0.9
MRPS35-204ENST00000542199 CXorf38Q8TB03 319 aa9.43□□□□□ -0.9
MRPS35-204ENST00000542199 SOCS4Q8WXH5 440 aa9.43□□□□□ -0.9
MRPS35-204ENST00000542199 USP6NLQ92738 828 aa9.43□□□□□ -0.9
MRPS35-204ENST00000542199 DEFB118Q96PH6 123 aa9.43□□□□□ -0.9
MRPS35-204ENST00000542199 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.43□□□□□ -0.9
MRPS35-204ENST00000542199 PORCNQ9H237 461 aa9.43□□□□□ -0.9
MRPS35-204ENST00000542199 DEF6Q9H4E7 631 aa9.43□□□□□ -0.9
MRPS35-204ENST00000542199 DCTPP1Q9H773 170 aa9.43□□□□□ -0.9
MRPS35-204ENST00000542199 BRD9Q9H8M2 597 aa9.43□□□□□ -0.9
MRPS35-204ENST00000542199 ATP8A2Q9NTI2 1148 aa9.43□□□□□ -0.9
MRPS35-204ENST00000542199 CLCA2Q9UQC9 943 aa9.43□□□□□ -0.9
MRPS35-204ENST00000542199 CUL9Q8IWT3 2517 aa9.43□□□□□ -0.9
MRPS35-204ENST00000542199 A0A1W2PRG0 241 aa9.42□□□□□ -0.9
MRPS35-204ENST00000542199 H0YGN5 161 aa9.42□□□□□ -0.9
MRPS35-204ENST00000542199 MAN2A2P49641 1150 aa9.42□□□□□ -0.9
MRPS35-204ENST00000542199 NHLH2Q02577 135 aa9.42□□□□□ -0.9
MRPS35-204ENST00000542199 NOMO2Q5JPE7 1267 aa9.42□□□□□ -0.9
MRPS35-204ENST00000542199 MAP3K21Q5TCX8 1036 aa9.42□□□□□ -0.9
MRPS35-204ENST00000542199 PCSK9Q8NBP7 692 aaKnown RBP9.42□□□□□ -0.9
MRPS35-204ENST00000542199 SLC44A5Q8NCS7 719 aa9.42□□□□□ -0.9
MRPS35-204ENST00000542199 TRIB2Q92519 343 aa9.42□□□□□ -0.9
MRPS35-204ENST00000542199 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.42□□□□□ -0.9
MRPS35-204ENST00000542199 RSAD1Q9HA92 442 aa9.42□□□□□ -0.9
MRPS35-204ENST00000542199 ECHDC1Q9NTX5 307 aa9.42□□□□□ -0.9
MRPS35-204ENST00000542199 SWAP70Q9UH65 585 aa9.42□□□□□ -0.9
MRPS35-204ENST00000542199 RABGAP1Q9Y3P9 1069 aa9.42□□□□□ -0.9
MRPS35-204ENST00000542199 MYH1P12882 1939 aa9.42□□□□□ -0.9
MRPS35-204ENST00000542199 ZNF785A8K8V0 405 aa9.41□□□□□ -0.9
MRPS35-204ENST00000542199 MGAT1P26572 445 aa9.41□□□□□ -0.9
MRPS35-204ENST00000542199 SLC7A1P30825 629 aa9.41□□□□□ -0.9
MRPS35-204ENST00000542199 POLD3Q15054 466 aaPredicted RBP9.41□□□□□ -0.9
MRPS35-204ENST00000542199 HS1BP3Q53T59 392 aa9.41□□□□□ -0.9
MRPS35-204ENST00000542199 C12orf60Q5U649 245 aa9.41□□□□□ -0.9
MRPS35-204ENST00000542199 NAIF1Q69YI7 327 aaPredicted RBP9.41□□□□□ -0.9
MRPS35-204ENST00000542199 ZSCAN25Q6NSZ9 544 aa9.41□□□□□ -0.9
MRPS35-204ENST00000542199 TMEM179Q6ZVK1 233 aa9.41□□□□□ -0.9
MRPS35-204ENST00000542199 GPR142Q7Z601 462 aa9.41□□□□□ -0.9
MRPS35-204ENST00000542199 FITM2Q8N6M3 262 aa9.41□□□□□ -0.9
MRPS35-204ENST00000542199 ANKS1AQ92625 1134 aa9.41□□□□□ -0.9
MRPS35-204ENST00000542199 EDAQ92838 391 aa9.41□□□□□ -0.9
MRPS35-204ENST00000542199 DYNLL2Q96FJ2 89 aa9.41□□□□□ -0.9
MRPS35-204ENST00000542199 C8orf49Q96NF6 230 aa9.41□□□□□ -0.9
MRPS35-204ENST00000542199 KLHL32Q96NJ5 620 aa9.41□□□□□ -0.9
MRPS35-204ENST00000542199 PAGR1Q9BTK6 254 aa9.41□□□□□ -0.9
MRPS35-204ENST00000542199 HTATIP2Q9BUP3 242 aa9.41□□□□□ -0.9
MRPS35-204ENST00000542199 TLR10Q9BXR5 811 aa9.41□□□□□ -0.9
MRPS35-204ENST00000542199 RPAP3Q9H6T3 665 aaPredicted RBP9.41□□□□□ -0.9
MRPS35-204ENST00000542199 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.41□□□□□ -0.9
MRPS35-204ENST00000542199 CFAP97Q9P2B7 532 aa9.41□□□□□ -0.9
MRPS35-204ENST00000542199 USP25Q9UHP3 1055 aa9.41□□□□□ -0.9
MRPS35-204ENST00000542199 ZDHHC8Q9ULC8 765 aa9.41□□□□□ -0.9
MRPS35-204ENST00000542199 TPCN1Q9ULQ1 816 aa9.41□□□□□ -0.9
MRPS35-204ENST00000542199 CYP2D7A0A087X1C5 515 aa9.4□□□□□ -0.9
MRPS35-204ENST00000542199 CCDC78A2IDD5 438 aa9.4□□□□□ -0.9
MRPS35-204ENST00000542199 SMIM22K7EJ46 135 aa9.4□□□□□ -0.9
MRPS35-204ENST00000542199 MYO1FO00160 1098 aa9.4□□□□□ -0.9
MRPS35-204ENST00000542199 MPHOSPH10O00566 681 aaKnown RBP9.4□□□□□ -0.9
MRPS35-204ENST00000542199 TBX3O15119 743 aa9.4□□□□□ -0.9
MRPS35-204ENST00000542199 TFRCP02786 760 aaKnown RBP9.4□□□□□ -0.9
MRPS35-204ENST00000542199 AKR1B1P15121 316 aa9.4□□□□□ -0.9
MRPS35-204ENST00000542199 CYP2B6P20813 491 aa9.4□□□□□ -0.9
MRPS35-204ENST00000542199 RGS2P41220 211 aa9.4□□□□□ -0.9
MRPS35-204ENST00000542199 SELENOPP49908 381 aa9.4□□□□□ -0.9
MRPS35-204ENST00000542199 CCNA1P78396 465 aa9.4□□□□□ -0.9
MRPS35-204ENST00000542199 KIAA1755Q5JYT7 1200 aa9.4□□□□□ -0.9
MRPS35-204ENST00000542199 FAM102AQ5T9C2 384 aaPredicted RBP9.4□□□□□ -0.9
MRPS35-204ENST00000542199 EMC10Q5UCC4 262 aa9.4□□□□□ -0.9
MRPS35-204ENST00000542199 NAA15Q9BXJ9 866 aaKnown RBP9.4□□□□□ -0.9
MRPS35-204ENST00000542199 TEX101Q9BY14 249 aa9.4□□□□□ -0.9
MRPS35-204ENST00000542199 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.4□□□□□ -0.9
MRPS35-204ENST00000542199 RAPGEFL1Q9UHV5 662 aa9.4□□□□□ -0.9
MRPS35-204ENST00000542199 AGAP1Q9UPQ3 857 aa9.4□□□□□ -0.9
MRPS35-204ENST00000542199 TCAF1Q9Y4C2 921 aa9.4□□□□□ -0.9
MRPS35-204ENST00000542199 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.4□□□□□ -0.9
MRPS35-204ENST00000542199 NAV1Q8NEY1 1877 aa9.39□□□□□ -0.91
MRPS35-204ENST00000542199 ANO9A1A5B4 782 aa9.39□□□□□ -0.91
MRPS35-204ENST00000542199 GOLGA6L6A8MZA4 724 aa9.39□□□□□ -0.91
MRPS35-204ENST00000542199 E9PLN8 166 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms