RNA–Protein interactions for RNA: ENST00000541667.5

CLSTN3-211, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-211ENST00000541667 ANKRD52Q8NB46 1076 aa12.43□□□□□ -0.42
CLSTN3-211ENST00000541667 LMO3Q8TAP4 145 aa12.43□□□□□ -0.42
CLSTN3-211ENST00000541667 RLN3Q8WXF3 142 aa12.43□□□□□ -0.42
CLSTN3-211ENST00000541667 NDRG1Q92597 394 aaKnown RBP12.43□□□□□ -0.42
CLSTN3-211ENST00000541667 SLC35C1Q96A29 364 aa12.43□□□□□ -0.42
CLSTN3-211ENST00000541667 ACOX2Q99424 681 aa12.43□□□□□ -0.42
CLSTN3-211ENST00000541667 FAM124BQ9H5Z6 455 aaPredicted RBP12.43□□□□□ -0.42
CLSTN3-211ENST00000541667 VPS45Q9NRW7 570 aa12.43□□□□□ -0.42
CLSTN3-211ENST00000541667 RMND1Q9NWS8 449 aa12.43□□□□□ -0.42
CLSTN3-211ENST00000541667 DEC1Q9P2X7 70 aa12.43□□□□□ -0.42
CLSTN3-211ENST00000541667 DNMT3LQ9UJW3 386 aa12.43□□□□□ -0.42
CLSTN3-211ENST00000541667 THADAQ6YHU6 1953 aa12.43□□□□□ -0.42
CLSTN3-211ENST00000541667 NUP205Q92621 2012 aa12.42□□□□□ -0.42
CLSTN3-211ENST00000541667 SLC16A3O15427 465 aaKnown RBP12.42□□□□□ -0.42
CLSTN3-211ENST00000541667 RHOBTB1O94844 696 aa12.42□□□□□ -0.42
CLSTN3-211ENST00000541667 CAVIN2O95810 425 aa12.42□□□□□ -0.42
CLSTN3-211ENST00000541667 ADRB1P08588 477 aa12.42□□□□□ -0.42
CLSTN3-211ENST00000541667 EPB41P11171 864 aaKnown RBP12.42□□□□□ -0.42
CLSTN3-211ENST00000541667 TYRP14679 529 aa12.42□□□□□ -0.42
CLSTN3-211ENST00000541667 PSEN1P49768 467 aa12.42□□□□□ -0.42
CLSTN3-211ENST00000541667 PKDCCQ504Y2 493 aa12.42□□□□□ -0.42
CLSTN3-211ENST00000541667 PPM1JQ5JR12 505 aa12.42□□□□□ -0.42
CLSTN3-211ENST00000541667 EOGTQ5NDL2 527 aa12.42□□□□□ -0.42
CLSTN3-211ENST00000541667 C10orf120Q5SQS8 335 aa12.42□□□□□ -0.42
CLSTN3-211ENST00000541667 STPG1Q5TH74 334 aa12.42□□□□□ -0.42
CLSTN3-211ENST00000541667 TPGS1Q6ZTW0 290 aa12.42□□□□□ -0.42
CLSTN3-211ENST00000541667 TTC39CQ8N584 583 aa12.42□□□□□ -0.42
CLSTN3-211ENST00000541667 ZSWIM1Q9BR11 485 aa12.42□□□□□ -0.42
CLSTN3-211ENST00000541667 NACA2Q9H009 215 aa12.42□□□□□ -0.42
CLSTN3-211ENST00000541667 NAGPAQ9UK23 515 aa12.42□□□□□ -0.42
CLSTN3-211ENST00000541667 PPP1R3GB7ZBB8 358 aa12.41□□□□□ -0.42
CLSTN3-211ENST00000541667 RNF225M0QZC1 329 aaPredicted RBP12.41□□□□□ -0.42
CLSTN3-211ENST00000541667 PMM2O15305 246 aa12.41□□□□□ -0.42
CLSTN3-211ENST00000541667 STX10O60499 249 aa12.41□□□□□ -0.42
CLSTN3-211ENST00000541667 PENKP01210 267 aaPredicted RBP12.41□□□□□ -0.42
CLSTN3-211ENST00000541667 GABRG2P18507 467 aa12.41□□□□□ -0.42
CLSTN3-211ENST00000541667 NUCB2P80303 420 aa12.41□□□□□ -0.42
CLSTN3-211ENST00000541667 CREB5Q02930 508 aa12.41□□□□□ -0.42
CLSTN3-211ENST00000541667 LRRC63Q05C16 580 aa12.41□□□□□ -0.42
CLSTN3-211ENST00000541667 PDE4CQ08493 712 aa12.41□□□□□ -0.42
CLSTN3-211ENST00000541667 CUL2Q13617 745 aa12.41□□□□□ -0.42
CLSTN3-211ENST00000541667 ELF2Q15723 593 aa12.41□□□□□ -0.42
CLSTN3-211ENST00000541667 AASDHQ4L235 1098 aaPredicted RBP12.41□□□□□ -0.42
CLSTN3-211ENST00000541667 FYB2Q5VWT5 728 aa12.41□□□□□ -0.42
CLSTN3-211ENST00000541667 BTBD8Q5XKL5 378 aa12.41□□□□□ -0.42
CLSTN3-211ENST00000541667 EGFLAMQ63HQ2 1017 aa12.41□□□□□ -0.42
CLSTN3-211ENST00000541667 ISM2Q6H9L7 571 aa12.41□□□□□ -0.42
CLSTN3-211ENST00000541667 TTI2Q6NXR4 508 aa12.41□□□□□ -0.42
CLSTN3-211ENST00000541667 RBBP8NLQ8NC74 664 aaPredicted RBP12.41□□□□□ -0.42
CLSTN3-211ENST00000541667 CCDC150Q8NCX0 1101 aa12.41□□□□□ -0.42
CLSTN3-211ENST00000541667 SMARCE1Q969G3 411 aa12.41□□□□□ -0.42
CLSTN3-211ENST00000541667 LSM14BQ9BX40 385 aaKnown RBP12.41□□□□□ -0.42
CLSTN3-211ENST00000541667 BBS2Q9BXC9 721 aa12.41□□□□□ -0.42
CLSTN3-211ENST00000541667 TMEM74BQ9NUR3 256 aa12.41□□□□□ -0.42
CLSTN3-211ENST00000541667 WDR35Q9P2L0 1181 aa12.41□□□□□ -0.42
CLSTN3-211ENST00000541667 MAN1B1Q9UKM7 699 aa12.41□□□□□ -0.42
CLSTN3-211ENST00000541667 CLEC4EQ9ULY5 219 aa12.41□□□□□ -0.42
CLSTN3-211ENST00000541667 PATE3B3GLJ2 98 aa12.4□□□□□ -0.42
CLSTN3-211ENST00000541667 NEDD8-MDP1E9PL57 170 aa12.4□□□□□ -0.42
CLSTN3-211ENST00000541667 GFRA2O00451 464 aa12.4□□□□□ -0.42
CLSTN3-211ENST00000541667 CDX4O14627 284 aaPredicted RBP12.4□□□□□ -0.42
CLSTN3-211ENST00000541667 GADD45BO75293 160 aaPredicted RBP12.4□□□□□ -0.42
CLSTN3-211ENST00000541667 NTSR1P30989 418 aa12.4□□□□□ -0.42
CLSTN3-211ENST00000541667 GBP1P32455 592 aa12.4□□□□□ -0.42
CLSTN3-211ENST00000541667 WASP42768 502 aa12.4□□□□□ -0.42
CLSTN3-211ENST00000541667 C10orf76Q5T2E6 689 aa12.4□□□□□ -0.42
CLSTN3-211ENST00000541667 GRAMD4Q6IC98 578 aa12.4□□□□□ -0.42
CLSTN3-211ENST00000541667 KIAA1211LQ6NV74 962 aa12.4□□□□□ -0.42
CLSTN3-211ENST00000541667 C11orf74Q86VG3 221 aa12.4□□□□□ -0.42
CLSTN3-211ENST00000541667 FAM217AQ8IXS0 508 aa12.4□□□□□ -0.42
CLSTN3-211ENST00000541667 ZNF513Q8N8E2 541 aaPredicted RBP12.4□□□□□ -0.42
CLSTN3-211ENST00000541667 C12orf50Q8NA57 414 aaPredicted RBP12.4□□□□□ -0.42
CLSTN3-211ENST00000541667 TFAP2BQ92481 460 aa12.4□□□□□ -0.42
CLSTN3-211ENST00000541667 DHTKD1Q96HY7 919 aaPredicted RBP12.4□□□□□ -0.42
CLSTN3-211ENST00000541667 CNTNAP3BQ96NU0 1288 aa12.4□□□□□ -0.42
CLSTN3-211ENST00000541667 GABRG3Q99928 467 aa12.4□□□□□ -0.42
CLSTN3-211ENST00000541667 CNTNAP3Q9BZ76 1288 aa12.4□□□□□ -0.42
CLSTN3-211ENST00000541667 POLMQ9NP87 494 aaPredicted RBP12.4□□□□□ -0.42
CLSTN3-211ENST00000541667 DNAJC17Q9NVM6 304 aaKnown RBP12.4□□□□□ -0.42
CLSTN3-211ENST00000541667 PLK2Q9NYY3 685 aa12.4□□□□□ -0.42
CLSTN3-211ENST00000541667 ARMCX3Q9UH62 379 aaPredicted RBP12.4□□□□□ -0.42
CLSTN3-211ENST00000541667 TSPAN16Q9UKR8 245 aa12.4□□□□□ -0.42
CLSTN3-211ENST00000541667 AGO1Q9UL18 857 aaKnown RBP12.4□□□□□ -0.42
CLSTN3-211ENST00000541667 PLXND1Q9Y4D7 1925 aa12.39□□□□□ -0.43
CLSTN3-211ENST00000541667 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.39□□□□□ -0.43
CLSTN3-211ENST00000541667 TCRBV21S2A2A0A5A6 115 aa12.39□□□□□ -0.43
CLSTN3-211ENST00000541667 LNP1A1A4G5 178 aa12.39□□□□□ -0.43
CLSTN3-211ENST00000541667 WASH3PC4AMC7 463 aa12.39□□□□□ -0.43
CLSTN3-211ENST00000541667 O00370 1275 aa12.39□□□□□ -0.43
CLSTN3-211ENST00000541667 XPO1O14980 1071 aaKnown RBP12.39□□□□□ -0.43
CLSTN3-211ENST00000541667 ALDH1A2O94788 518 aa12.39□□□□□ -0.43
CLSTN3-211ENST00000541667 SMC2O95347 1197 aa12.39□□□□□ -0.43
CLSTN3-211ENST00000541667 RALAP11233 206 aa12.39□□□□□ -0.43
CLSTN3-211ENST00000541667 TRIM21P19474 475 aaKnown RBP12.39□□□□□ -0.43
CLSTN3-211ENST00000541667 PTGER3P43115 390 aa12.39□□□□□ -0.43
CLSTN3-211ENST00000541667 FMO5P49326 533 aa12.39□□□□□ -0.43
CLSTN3-211ENST00000541667 TKTL1P51854 596 aa12.39□□□□□ -0.43
CLSTN3-211ENST00000541667 YWHAGP61981 247 aaKnown RBP eCLIP12.39□□□□□ -0.43
CLSTN3-211ENST00000541667 IRX4P78413 519 aa12.39□□□□□ -0.43
CLSTN3-211ENST00000541667 COG7P83436 770 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms