RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 NOP14P78316 857 aaKnown RBP10.06□□□□□ -0.8
YBX3-211ENST00000541351 CCT2P78371 535 aaKnown RBP10.06□□□□□ -0.8
YBX3-211ENST00000541351 NCAPHQ15003 741 aa10.06□□□□□ -0.8
YBX3-211ENST00000541351 KRTAP21-3Q3LHN1 58 aa10.06□□□□□ -0.8
YBX3-211ENST00000541351 JADE1Q6IE81 842 aa10.06□□□□□ -0.8
YBX3-211ENST00000541351 TAS1R3Q7RTX0 852 aa10.06□□□□□ -0.8
YBX3-211ENST00000541351 TMEM25Q86YD3 366 aa10.06□□□□□ -0.8
YBX3-211ENST00000541351 OVCA2Q8WZ82 227 aa10.06□□□□□ -0.8
YBX3-211ENST00000541351 NTPCRQ9BSD7 190 aaKnown RBP10.06□□□□□ -0.8
YBX3-211ENST00000541351 ESYT1Q9BSJ8 1104 aa10.06□□□□□ -0.8
YBX3-211ENST00000541351 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.06□□□□□ -0.8
YBX3-211ENST00000541351 TTLL2Q9BWV7 592 aa10.06□□□□□ -0.8
YBX3-211ENST00000541351 ADNPQ9H2P0 1102 aa10.06□□□□□ -0.8
YBX3-211ENST00000541351 C6orf106Q9H6K1 298 aaPredicted RBP10.06□□□□□ -0.8
YBX3-211ENST00000541351 ERVMER34-1Q9H9K5 563 aa10.06□□□□□ -0.8
YBX3-211ENST00000541351 TMPRSS4Q9NRS4 437 aa10.06□□□□□ -0.8
YBX3-211ENST00000541351 TMLHEQ9NVH6 421 aa10.06□□□□□ -0.8
YBX3-211ENST00000541351 WDR70Q9NW82 654 aa10.06□□□□□ -0.8
YBX3-211ENST00000541351 DPP3Q9NY33 737 aa10.06□□□□□ -0.8
YBX3-211ENST00000541351 ANAPC2Q9UJX6 822 aa10.06□□□□□ -0.8
YBX3-211ENST00000541351 LSM7Q9UK45 103 aaKnown RBP10.06□□□□□ -0.8
YBX3-211ENST00000541351 GTF3C4Q9UKN8 822 aa10.06□□□□□ -0.8
YBX3-211ENST00000541351 HCN2Q9UL51 889 aa10.06□□□□□ -0.8
YBX3-211ENST00000541351 KCNJ14Q9UNX9 436 aa10.06□□□□□ -0.8
YBX3-211ENST00000541351 TLN1Q9Y490 2541 aaKnown RBP10.06□□□□□ -0.8
YBX3-211ENST00000541351 PTPRJQ12913 1337 aa10.06□□□□□ -0.8
YBX3-211ENST00000541351 PRRT4C9JH25 899 aa10.05□□□□□ -0.8
YBX3-211ENST00000541351 RIOK3O14730 519 aaKnown RBP10.05□□□□□ -0.8
YBX3-211ENST00000541351 HNRNPDLO14979 420 aaKnown RBP10.05□□□□□ -0.8
YBX3-211ENST00000541351 SLC16A4O15374 487 aa10.05□□□□□ -0.8
YBX3-211ENST00000541351 CYP26A1O43174 497 aa10.05□□□□□ -0.8
YBX3-211ENST00000541351 HIP1RO75146 1068 aa10.05□□□□□ -0.8
YBX3-211ENST00000541351 CSO75390 466 aaKnown RBP10.05□□□□□ -0.8
YBX3-211ENST00000541351 DNTTP04053 509 aa10.05□□□□□ -0.8
YBX3-211ENST00000541351 OR52Z1P0C646 297 aa10.05□□□□□ -0.8
YBX3-211ENST00000541351 CD38P28907 300 aa10.05□□□□□ -0.8
YBX3-211ENST00000541351 ABCD1P33897 745 aa10.05□□□□□ -0.8
YBX3-211ENST00000541351 DUSP3P51452 185 aaPredicted RBP10.05□□□□□ -0.8
YBX3-211ENST00000541351 SKOR1P84550 965 aa10.05□□□□□ -0.8
YBX3-211ENST00000541351 EIF4HQ15056 248 aaKnown RBP10.05□□□□□ -0.8
YBX3-211ENST00000541351 ENOX2Q16206 610 aaKnown RBP10.05□□□□□ -0.8
YBX3-211ENST00000541351 LINC00303Q3SY05 128 aa10.05□□□□□ -0.8
YBX3-211ENST00000541351 HECTD3Q5T447 861 aa10.05□□□□□ -0.8
YBX3-211ENST00000541351 NT5DC4Q86YG4 428 aa10.05□□□□□ -0.8
YBX3-211ENST00000541351 RDH13Q8NBN7 331 aa10.05□□□□□ -0.8
YBX3-211ENST00000541351 OR2T3Q8NH03 318 aa10.05□□□□□ -0.8
YBX3-211ENST00000541351 GOLGA1Q92805 767 aa10.05□□□□□ -0.8
YBX3-211ENST00000541351 EXTL1Q92935 676 aa10.05□□□□□ -0.8
YBX3-211ENST00000541351 SLC46A1Q96NT5 459 aa10.05□□□□□ -0.8
YBX3-211ENST00000541351 AASDHPPTQ9NRN7 309 aa10.05□□□□□ -0.8
YBX3-211ENST00000541351 GEMIN8Q9NWZ8 242 aaKnown RBP10.05□□□□□ -0.8
YBX3-211ENST00000541351 MARK1Q9P0L2 795 aa10.05□□□□□ -0.8
YBX3-211ENST00000541351 THAP10Q9P2Z0 257 aaPredicted RBP10.05□□□□□ -0.8
YBX3-211ENST00000541351 TJP2Q9UDY2 1190 aa10.05□□□□□ -0.8
YBX3-211ENST00000541351 NCKAP1Q9Y2A7 1128 aa10.05□□□□□ -0.8
YBX3-211ENST00000541351 R3HCC1Q9Y3T6 440 aaKnown RBP10.05□□□□□ -0.8
YBX3-211ENST00000541351 PCDHGA8Q9Y5G5 932 aa10.05□□□□□ -0.8
YBX3-211ENST00000541351 ANAPC1Q9H1A4 1944 aa10.04□□□□□ -0.8
YBX3-211ENST00000541351 A0A1W2PPC4 97 aa10.04□□□□□ -0.8
YBX3-211ENST00000541351 WASH3PC4AMC7 463 aa10.04□□□□□ -0.8
YBX3-211ENST00000541351 RTN3O95197 1032 aaPredicted RBP10.04□□□□□ -0.8
YBX3-211ENST00000541351 EPHX1P07099 455 aa10.04□□□□□ -0.8
YBX3-211ENST00000541351 GP1BAP07359 652 aa10.04□□□□□ -0.8
YBX3-211ENST00000541351 FAM87AP0C7U9 286 aa10.04□□□□□ -0.8
YBX3-211ENST00000541351 ALPPL2P10696 532 aa10.04□□□□□ -0.8
YBX3-211ENST00000541351 PSMA5P28066 241 aa10.04□□□□□ -0.8
YBX3-211ENST00000541351 PDIA3P30101 505 aaKnown RBP10.04□□□□□ -0.8
YBX3-211ENST00000541351 KRT2P35908 639 aa10.04□□□□□ -0.8
YBX3-211ENST00000541351 CASRP41180 1078 aa10.04□□□□□ -0.8
YBX3-211ENST00000541351 RXRGP48443 463 aa10.04□□□□□ -0.8
YBX3-211ENST00000541351 TUBP50607 506 aa10.04□□□□□ -0.8
YBX3-211ENST00000541351 POU5F1Q01860 360 aaKnown RBP10.04□□□□□ -0.8
YBX3-211ENST00000541351 ZNF211Q13398 564 aaPredicted RBP10.04□□□□□ -0.8
YBX3-211ENST00000541351 ADCK5Q3MIX3 580 aa10.04□□□□□ -0.8
YBX3-211ENST00000541351 SFMBT2Q5VUG0 894 aa10.04□□□□□ -0.8
YBX3-211ENST00000541351 LAYNQ6UX15 382 aa10.04□□□□□ -0.8
YBX3-211ENST00000541351 KANSL1Q7Z3B3 1105 aa10.04□□□□□ -0.8
YBX3-211ENST00000541351 BBS7Q8IWZ6 715 aa10.04□□□□□ -0.8
YBX3-211ENST00000541351 PDCL2Q8N4E4 241 aa10.04□□□□□ -0.8
YBX3-211ENST00000541351 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.04□□□□□ -0.8
YBX3-211ENST00000541351 ZNF564Q8TBZ8 553 aaPredicted RBP10.04□□□□□ -0.8
YBX3-211ENST00000541351 WASF1Q92558 559 aa10.04□□□□□ -0.8
YBX3-211ENST00000541351 MSTO1Q9BUK6 570 aa10.04□□□□□ -0.8
YBX3-211ENST00000541351 TRIM9Q9C026 710 aa10.04□□□□□ -0.8
YBX3-211ENST00000541351 USP29Q9HBJ7 922 aa10.04□□□□□ -0.8
YBX3-211ENST00000541351 NCOA5Q9HCD5 579 aaKnown RBP10.04□□□□□ -0.8
YBX3-211ENST00000541351 SCML1Q9UN30 329 aa10.04□□□□□ -0.8
YBX3-211ENST00000541351 TIMM44O43615 452 aa10.03□□□□□ -0.8
YBX3-211ENST00000541351 OPA1O60313 960 aa10.03□□□□□ -0.8
YBX3-211ENST00000541351 ACSL1P33121 698 aa10.03□□□□□ -0.8
YBX3-211ENST00000541351 CCT6AP40227 531 aaKnown RBP10.03□□□□□ -0.8
YBX3-211ENST00000541351 TAF10Q12962 218 aa10.03□□□□□ -0.8
YBX3-211ENST00000541351 ENPP2Q13822 863 aa10.03□□□□□ -0.8
YBX3-211ENST00000541351 C3orf38Q5JPI3 329 aa10.03□□□□□ -0.8
YBX3-211ENST00000541351 CDCP2Q5VXM1 449 aa10.03□□□□□ -0.8
YBX3-211ENST00000541351 SERPINA13PQ6UXR4 307 aa10.03□□□□□ -0.8
YBX3-211ENST00000541351 TMEM131Q92545 1883 aa10.03□□□□□ -0.8
YBX3-211ENST00000541351 MOCOSQ96EN8 888 aa10.03□□□□□ -0.8
YBX3-211ENST00000541351 AGXT2Q9BYV1 514 aa10.03□□□□□ -0.8
YBX3-211ENST00000541351 RAB34Q9BZG1 259 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms